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The map label for this gene is etfB [H]

Identifier: 49187414

GI number: 49187414

Start: 4328393

End: 4329166

Strand: Reverse

Name: etfB [H]

Synonym: BAS4419

Alternate gene names: 49187414

Gene position: 4329166-4328393 (Counterclockwise)

Preceding gene: 49187415

Following gene: 49187413

Centisome position: 82.8

GC content: 37.98

Gene sequence:

>774_bases
ATGAACATCTACGTACTCATGAAACGAACATTTGATACAGAAGAAAAAATCGTAATTAAAAACGGTGCAATTTACGATGG
CGAAGCGGAATTCATCATCAACCCTTACGATGAATATGCGATTGAAGAAGCAATTCAAGTAAGAGACGCACAAGGTGGAG
AAGTTACTGTTGTAACAGTCGGTGGCGAAGATAGTGAGAAAGAACTTCGTACGGCGTTAGCGATGGGCTGTGATAAAGCG
GTATTAATTAATATTGAAGATGATGTAGAAAATGGTGACCAGTTTACAACAGCAAAAGTGCTTGCTGAATATTTAAAAGA
TAAAGATGCAGATTTAATTTTAGGCGGAAACGTTGCAATTGATGGTGCATCTGGACAAGTTGGTCCGCGTGTAGCTGAAG
CATTAAATATTCCGTACGTAACGACAATTACAAAACTTGAAATTGACGGTACAAACGTGAAGATTGAGCGCGATGTTGAA
GGTGATACAGAAGTGGTTGAAACTTCATTACCAGTTTTAGTAACAGCACAGCAAGGTTTAAATGAACCGCGTTATCCATC
GCTTCCAGGTATTATGAAAGCGAAGAAAAAGCCACTAGAAGAATTAGAATTAGATGATTTAGATTTAGAAGAAGATGATG
TGGAAGCAAAGACAAAAACAATTGAAATCTATTTGCCTCCTAAGAAAGATGCAGGAAAAGTGTTACAAGGCGAGCTGCAA
GATCAAGTAAAAGAACTTGTATCGTTGCTCCATACAGAAGCGAAAGTAATCTAA

Upstream 100 bases:

>100_bases
GCCTTCATTTAGTGGCAGGTAGTTCAATTATTTTTTTAATATAAATTAACAGAAAATTAAAATTGATAGAATCTTTCTGA
AAAACAAGGGGGTAAATGGA

Downstream 100 bases:

>100_bases
TAAAATACGAAATTATATATGCAGGAGGGAAAATCTATGGCTCGTAAAGTATTAGTAATGGGTGAAGTTCGTGATGGATC
GCTACGTAACGTTTCGTTTG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTVGGEDSEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAIDGASGQVGPRVAEALNIPYVTTITKLEIDGTNVKIERDVE
GDTEVVETSLPVLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI

Sequences:

>Translated_257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTVGGEDSEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAIDGASGQVGPRVAEALNIPYVTTITKLEIDGTNVKIERDVE
GDTEVVETSLPVLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI
>Mature_257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTVGGEDSEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAIDGASGQVGPRVAEALNIPYVTTITKLEIDGTNVKIERDVE
GDTEVVETSLPVLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=237, Percent_Identity=35.0210970464135, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI62420877, Length=215, Percent_Identity=35.3488372093023, Blast_Score=126, Evalue=2e-29,
Organism=Escherichia coli, GI2367123, Length=237, Percent_Identity=27.4261603375527, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87081682, Length=258, Percent_Identity=29.4573643410853, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25141345, Length=239, Percent_Identity=36.8200836820084, Blast_Score=141, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=34.375, Blast_Score=123, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24651147, Length=236, Percent_Identity=34.7457627118644, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24651145, Length=236, Percent_Identity=34.7457627118644, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28190; Mature: 28190

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTV
CEEEEEEEECCCCCCEEEEECCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
GGEDSEKELRTALAMGCDKAVLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAI
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEE
DGASGQVGPRVAEALNIPYVTTITKLEIDGTNVKIERDVEGDTEVVETSLPVLVTAQQGL
ECCCCCCCHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHCCCCEEEEECCCC
NEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
DQVKELVSLLHTEAKVI
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAQGGEVTVVTV
CEEEEEEEECCCCCCEEEEECCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
GGEDSEKELRTALAMGCDKAVLINIEDDVENGDQFTTAKVLAEYLKDKDADLILGGNVAI
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEE
DGASGQVGPRVAEALNIPYVTTITKLEIDGTNVKIERDVEGDTEVVETSLPVLVTAQQGL
ECCCCCCCHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHCCCCEEEEECCCC
NEPRYPSLPGIMKAKKKPLEELELDDLDLEEDDVEAKTKTIEIYLPPKKDAGKVLQGELQ
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
DQVKELVSLLHTEAKVI
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]