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The map label for this gene is dppC [H]

Identifier: 49187386

GI number: 49187386

Start: 4304131

End: 4305030

Strand: Direct

Name: dppC [H]

Synonym: BAS4391

Alternate gene names: 49187386

Gene position: 4304131-4305030 (Clockwise)

Preceding gene: 49187376

Following gene: 49187387

Centisome position: 82.32

GC content: 37.44

Gene sequence:

>900_bases
ATGGAAGTTCGTCTTTCTAAAGAAGAAAACACTTCTTTACAAACGATTCAAACGAAGAACACATCGAAATGGATTATGAG
CTATCGAAAACTGAAAAGAAATAAAATGGCATTTATCGGAGGTATTATCGTTCTTTTCTATATTGTTATAGCTATATTTG
CCCCATTGTTAGCACCCTATAATCCATTTGACATTCAGTTAGTCAACAAATTACAACCACCATCTATGGAACATTGGATG
GGGACAGATGATAAAGGTAGAGATATTTTAAGCCGCCTTTTACACGGGACACGACTTTCATTACTTGTTGGATTTTCTTC
TGTATTTATAGGAGCATTGTTCGGCATTATTCTCGGTATCATTTCTGGTTATTACGGTGGATGGTTTGACACGGTTATTA
TGCGAATCATCGATATCATGCTAGCTTTCCCTGGTATTTTACTTGCTCTTGCTATTGTAGGCGCACTAGGACCAAGTCTT
GTGAACGTAATTATCGCTATTGGCTTTTTCTCAATCCCTATGTTCGCTCGTATCGTTAGAGCTTCTACATTAACAGTAAA
AAAATTAGAGTATATCGATGCTATAAGAGCACTAGGGGCAAATGACTTTACTATTATTATGAAACACATATTCCCTAACA
TCTTATCACCTATTATTGTCCAAGCCACTTTACGCTTAGCTACAGCAATTTTATCTGCAGCTGGATTATCATTTTTAGGA
CTTGGAGCGCAACCACCTTCACCTGAATGGGGTGCCATGTTAAGTAATGGACGCGACTTTTTATTTACCGCACCACATAT
TGCAATGTTTCCTGGAATTGCAATGTCTACACTCGTAATCGGTTTAAACATGTTTGGTGATGGATTACGTGATGCACTAG
ATCCGAGACTTAAAAAATAG

Upstream 100 bases:

>100_bases
TCTTTACTTCTATTTGCATTTTCTTTACTTATTGTTTTAAACTCGTTGACTCGTTTTAATTTTCTGATAATTTATTCATA
AAGAAAGGGAGGTATGAAAA

Downstream 100 bases:

>100_bases
AAAGGGGCATTATATATGCTAATGTTTATATTTCGTAGAATACTACAATTAATTCCCGTTCTTTTCGGCGTTGTATTCGT
TGTTTTCTTAATTAGGCAAA

Product: oligopeptide ABC transporter oligopeptide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MEVRLSKEENTSLQTIQTKNTSKWIMSYRKLKRNKMAFIGGIIVLFYIVIAIFAPLLAPYNPFDIQLVNKLQPPSMEHWM
GTDDKGRDILSRLLHGTRLSLLVGFSSVFIGALFGIILGIISGYYGGWFDTVIMRIIDIMLAFPGILLALAIVGALGPSL
VNVIIAIGFFSIPMFARIVRASTLTVKKLEYIDAIRALGANDFTIIMKHIFPNILSPIIVQATLRLATAILSAAGLSFLG
LGAQPPSPEWGAMLSNGRDFLFTAPHIAMFPGIAMSTLVIGLNMFGDGLRDALDPRLKK

Sequences:

>Translated_299_residues
MEVRLSKEENTSLQTIQTKNTSKWIMSYRKLKRNKMAFIGGIIVLFYIVIAIFAPLLAPYNPFDIQLVNKLQPPSMEHWM
GTDDKGRDILSRLLHGTRLSLLVGFSSVFIGALFGIILGIISGYYGGWFDTVIMRIIDIMLAFPGILLALAIVGALGPSL
VNVIIAIGFFSIPMFARIVRASTLTVKKLEYIDAIRALGANDFTIIMKHIFPNILSPIIVQATLRLATAILSAAGLSFLG
LGAQPPSPEWGAMLSNGRDFLFTAPHIAMFPGIAMSTLVIGLNMFGDGLRDALDPRLKK
>Mature_299_residues
MEVRLSKEENTSLQTIQTKNTSKWIMSYRKLKRNKMAFIGGIIVLFYIVIAIFAPLLAPYNPFDIQLVNKLQPPSMEHWM
GTDDKGRDILSRLLHGTRLSLLVGFSSVFIGALFGIILGIISGYYGGWFDTVIMRIIDIMLAFPGILLALAIVGALGPSL
VNVIIAIGFFSIPMFARIVRASTLTVKKLEYIDAIRALGANDFTIIMKHIFPNILSPIIVQATLRLATAILSAAGLSFLG
LGAQPPSPEWGAMLSNGRDFLFTAPHIAMFPGIAMSTLVIGLNMFGDGLRDALDPRLKK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=50.7142857142857, Blast_Score=295, Evalue=2e-81,
Organism=Escherichia coli, GI1787760, Length=293, Percent_Identity=42.6621160409556, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=48.2014388489209, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=38.0753138075314, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787498, Length=298, Percent_Identity=35.2348993288591, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1787549, Length=274, Percent_Identity=35.4014598540146, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=32.15859030837, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32768; Mature: 32768

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVRLSKEENTSLQTIQTKNTSKWIMSYRKLKRNKMAFIGGIIVLFYIVIAIFAPLLAPY
CCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPFDIQLVNKLQPPSMEHWMGTDDKGRDILSRLLHGTRLSLLVGFSSVFIGALFGIILGI
CCCHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ISGYYGGWFDTVIMRIIDIMLAFPGILLALAIVGALGPSLVNVIIAIGFFSIPMFARIVR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ASTLTVKKLEYIDAIRALGANDFTIIMKHIFPNILSPIIVQATLRLATAILSAAGLSFLG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGAQPPSPEWGAMLSNGRDFLFTAPHIAMFPGIAMSTLVIGLNMFGDGLRDALDPRLKK
CCCCCCCCCHHHHHHCCCCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEVRLSKEENTSLQTIQTKNTSKWIMSYRKLKRNKMAFIGGIIVLFYIVIAIFAPLLAPY
CCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPFDIQLVNKLQPPSMEHWMGTDDKGRDILSRLLHGTRLSLLVGFSSVFIGALFGIILGI
CCCHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ISGYYGGWFDTVIMRIIDIMLAFPGILLALAIVGALGPSLVNVIIAIGFFSIPMFARIVR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ASTLTVKKLEYIDAIRALGANDFTIIMKHIFPNILSPIIVQATLRLATAILSAAGLSFLG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGAQPPSPEWGAMLSNGRDFLFTAPHIAMFPGIAMSTLVIGLNMFGDGLRDALDPRLKK
CCCCCCCCCHHHHHHCCCCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]