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The map label for this gene is yedU [C]

Identifier: 49187376

GI number: 49187376

Start: 4294150

End: 4294833

Strand: Direct

Name: yedU [C]

Synonym: BAS4381

Alternate gene names: 49187376

Gene position: 4294150-4294833 (Clockwise)

Preceding gene: 49187368

Following gene: 49187386

Centisome position: 82.13

GC content: 38.74

Gene sequence:

>684_bases
ATGAAGAAAAAAATGTTAGTCGTATTAACGAGCGTAGAAAAATATCCAAATTTAAATCGAGCTACTGGCCTTTGGCTTGG
CGAAGCTGTCCATTTCGTTAAAAAAGTTGAAGAAGCTGGTTACGAAGTAGATTATGTTAGCCCACAAGGTGGTTATACAC
CGATTGATCCGCATAGTTTAGCAATGGCGGAGAGCATCGATTGGGAATGGTATCAAAAGAAAGAATTTATGAATCGTCTC
GGTTCTACAATGAAACCGAGTGAGGTGAATCCGGAAGACTATGCTGTTATTTATTACGCAGGTGGTCACGGTGTGATTTG
GGACTTCCCAGAAAATAAAGAACTACAAATGATTAGCCGTAACATTTATGAAAATGGCGGAATCGTTTCCTCTGTTTGTC
ACGGAGCTGCTGGTTTATTTCATATCACATTAAGCAATGGGGATCGTTTAATTAGTGGTAAAAAAGTAACGGGATTCTCG
AATGAAGAAGAAAAACTAGCTGAATTAGATCAATTTGTTCCATTTTTAACAGAAGATGAACTCATGAAAAATGGAGGACT
TTACGAAAAAGCTGCAGAGCCTTGGGAAGCTTTCGCTGTAGAAGATAATCGTGTTATCACTGGTCAAAACCCAGCTTCAG
GTGGTGCAGTAGCTGAATTAGTATTACAACACGCAAAAAAATAA

Upstream 100 bases:

>100_bases
TCCGATATAAGGAGGGCTGACATGGTTATTCAAATTTGCAATTTCTAACTTAATAAAATAATAAACTTTTATATAGAAGA
AACATTACAGGAGGATTATG

Downstream 100 bases:

>100_bases
CATGTAATAAAAAAGCAGGTTTTCCATTACAATAGGAAAACCTGCTTTTTTACGAAATCATTTGCAAAATAGCAATAACT
TCTTTTTCAATTTCCGAATC

Product: thiJ/pfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSLAMAESIDWEWYQKKEFMNRL
GSTMKPSEVNPEDYAVIYYAGGHGVIWDFPENKELQMISRNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFS
NEEEKLAELDQFVPFLTEDELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGAVAELVLQHAKK

Sequences:

>Translated_227_residues
MKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSLAMAESIDWEWYQKKEFMNRL
GSTMKPSEVNPEDYAVIYYAGGHGVIWDFPENKELQMISRNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFS
NEEEKLAELDQFVPFLTEDELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGAVAELVLQHAKK
>Mature_227_residues
MKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSLAMAESIDWEWYQKKEFMNRL
GSTMKPSEVNPEDYAVIYYAGGHGVIWDFPENKELQMISRNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFS
NEEEKLAELDQFVPFLTEDELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGAVAELVLQHAKK

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=226, Percent_Identity=35.3982300884956, Blast_Score=130, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324967, Length=223, Percent_Identity=32.7354260089686, Blast_Score=106, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6324975, Length=223, Percent_Identity=32.2869955156951, Blast_Score=106, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6323984, Length=223, Percent_Identity=31.8385650224215, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25277; Mature: 25277

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSL
CCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH
AMAESIDWEWYQKKEFMNRLGSTMKPSEVNPEDYAVIYYAGGHGVIWDFPENKELQMISR
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH
NIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFSNEEEKLAELDQFVPFLTEDE
HHHCCCCHHHHHHHCCCEEEEEEECCCCEEECCCEECCCCCHHHHHHHHHHHCCCCCHHH
LMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGAVAELVLQHAKK
HHHCCCCCHHHCCCHHEEEECCCEEEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSL
CCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH
AMAESIDWEWYQKKEFMNRLGSTMKPSEVNPEDYAVIYYAGGHGVIWDFPENKELQMISR
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH
NIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFSNEEEKLAELDQFVPFLTEDE
HHHCCCCHHHHHHHCCCEEEEEEECCCCEEECCCEECCCCCHHHHHHHHHHHCCCCCHHH
LMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGAVAELVLQHAKK
HHHCCCCCHHHCCCHHEEEECCCEEEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA