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The map label for this gene is gsiC [H]

Identifier: 49187387

GI number: 49187387

Start: 4305046

End: 4305966

Strand: Direct

Name: gsiC [H]

Synonym: BAS4392

Alternate gene names: 49187387

Gene position: 4305046-4305966 (Clockwise)

Preceding gene: 49187386

Following gene: 49187388

Centisome position: 82.34

GC content: 38.33

Gene sequence:

>921_bases
ATGCTAATGTTTATATTTCGTAGAATACTACAATTAATTCCCGTTCTTTTCGGCGTTGTATTCGTTGTTTTCTTAATTAG
GCAAATGGTACCGGGTGACCCAGCTCTTCTTATCGCTGGTGAAGGAGCATCTAAAGAAACTGTCGAGCAAATACGTCACC
AATTAGGGTTGGACAAACCTTTTATCATGCAATATTTCTCTTATATCGGAAATATATTGCAAGGTGATTTCGGAGTTTCG
ATTCGTTCTAATCGCCCAGTGTTAGACGAAGTATTAATCCGCCTTCCAATCACTATTGAACTCGCACTATGTAGTATCGT
CATTACAGTTGTAATCGGGATGATCGCTGGCATCATCTCTGCTACAAAACAATATTCTTGGACAGATGTTTCTATTATGA
TTATCGCTTTATTAGGTGTCTCATTACCAAGCTTTTGGTTTGGACTTATGCTCATTTTCTACTTCTCTGTCCAAATTCAA
ATATTCCCCGTTTCTGGTTGGGGAACTTGGATGCACATGGTTTTACCAGCACTTACACTAGGTGCATCTGGCGCAGCAAT
TGTAGCACGTATGACTCGCTCAAGTATGCTTGATGTCATACGCCAAGATTATATACGAACAGCAAGAGCAAAAGGGGTAA
AAGAAAGAGTCGTTATATATAAACATGCTTTGAGGAACGCACTAATTCCCGTTATTACTGTTGTTGGATTGCAATTTGGT
GCACTTTTAGGCGGTACAGTTTTAGTAGAATCAGTTTTTGCTATAAATGGACTTGGAAGATTGATTGTAGACGCTATCCG
AATGAGAGACTTACCGATGTTACAAGGAGGCGTATTAATTGCCTCAGTCATCTTCGTTCTAGTCAATCTTATTGTTGATA
TTTTATACCGTTATTTCAATAAACGTATTGAGCTTAATTAA

Upstream 100 bases:

>100_bases
AATTGCAATGTCTACACTCGTAATCGGTTTAAACATGTTTGGTGATGGATTACGTGATGCACTAGATCCGAGACTTAAAA
AATAGAAAGGGGCATTATAT

Downstream 100 bases:

>100_bases
GGGGGTGCACAAACATGAATAAAAAGGAAGAGGTATTACAAGTTAAAGATTTAAAAACACATTTCTTTACAGACGAAGGT
GTAAGTAAAGCGGTTGATGG

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLMFIFRRILQLIPVLFGVVFVVFLIRQMVPGDPALLIAGEGASKETVEQIRHQLGLDKPFIMQYFSYIGNILQGDFGVS
IRSNRPVLDEVLIRLPITIELALCSIVITVVIGMIAGIISATKQYSWTDVSIMIIALLGVSLPSFWFGLMLIFYFSVQIQ
IFPVSGWGTWMHMVLPALTLGASGAAIVARMTRSSMLDVIRQDYIRTARAKGVKERVVIYKHALRNALIPVITVVGLQFG
ALLGGTVLVESVFAINGLGRLIVDAIRMRDLPMLQGGVLIASVIFVLVNLIVDILYRYFNKRIELN

Sequences:

>Translated_306_residues
MLMFIFRRILQLIPVLFGVVFVVFLIRQMVPGDPALLIAGEGASKETVEQIRHQLGLDKPFIMQYFSYIGNILQGDFGVS
IRSNRPVLDEVLIRLPITIELALCSIVITVVIGMIAGIISATKQYSWTDVSIMIIALLGVSLPSFWFGLMLIFYFSVQIQ
IFPVSGWGTWMHMVLPALTLGASGAAIVARMTRSSMLDVIRQDYIRTARAKGVKERVVIYKHALRNALIPVITVVGLQFG
ALLGGTVLVESVFAINGLGRLIVDAIRMRDLPMLQGGVLIASVIFVLVNLIVDILYRYFNKRIELN
>Mature_306_residues
MLMFIFRRILQLIPVLFGVVFVVFLIRQMVPGDPALLIAGEGASKETVEQIRHQLGLDKPFIMQYFSYIGNILQGDFGVS
IRSNRPVLDEVLIRLPITIELALCSIVITVVIGMIAGIISATKQYSWTDVSIMIIALLGVSLPSFWFGLMLIFYFSVQIQ
IFPVSGWGTWMHMVLPALTLGASGAAIVARMTRSSMLDVIRQDYIRTARAKGVKERVVIYKHALRNALIPVITVVGLQFG
ALLGGTVLVESVFAINGLGRLIVDAIRMRDLPMLQGGVLIASVIFVLVNLIVDILYRYFNKRIELN

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=304, Percent_Identity=50.9868421052632, Blast_Score=310, Evalue=7e-86,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=42.8571428571429, Blast_Score=271, Evalue=5e-74,
Organism=Escherichia coli, GI1789888, Length=307, Percent_Identity=40.0651465798046, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1787761, Length=305, Percent_Identity=40.655737704918, Blast_Score=210, Evalue=8e-56,
Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=34.0909090909091, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=29.2011019283747, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1787550, Length=326, Percent_Identity=30.3680981595092, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33981; Mature: 33981

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMFIFRRILQLIPVLFGVVFVVFLIRQMVPGDPALLIAGEGASKETVEQIRHQLGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCH
FIMQYFSYIGNILQGDFGVSIRSNRPVLDEVLIRLPITIELALCSIVITVVIGMIAGIIS
HHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ATKQYSWTDVSIMIIALLGVSLPSFWFGLMLIFYFSVQIQIFPVSGWGTWMHMVLPALTL
HHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHC
GASGAAIVARMTRSSMLDVIRQDYIRTARAKGVKERVVIYKHALRNALIPVITVVGLQFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGGTVLVESVFAINGLGRLIVDAIRMRDLPMLQGGVLIASVIFVLVNLIVDILYRYFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHH
KRIELN
HHCCCC
>Mature Secondary Structure
MLMFIFRRILQLIPVLFGVVFVVFLIRQMVPGDPALLIAGEGASKETVEQIRHQLGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCH
FIMQYFSYIGNILQGDFGVSIRSNRPVLDEVLIRLPITIELALCSIVITVVIGMIAGIIS
HHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ATKQYSWTDVSIMIIALLGVSLPSFWFGLMLIFYFSVQIQIFPVSGWGTWMHMVLPALTL
HHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHC
GASGAAIVARMTRSSMLDVIRQDYIRTARAKGVKERVVIYKHALRNALIPVITVVGLQFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGGTVLVESVFAINGLGRLIVDAIRMRDLPMLQGGVLIASVIFVLVNLIVDILYRYFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHH
KRIELN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]