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The map label for this gene is fbp [H]

Identifier: 46447449

GI number: 46447449

Start: 2169300

End: 2170715

Strand: Reverse

Name: fbp [H]

Synonym: pc1815

Alternate gene names: 46447449

Gene position: 2170715-2169300 (Counterclockwise)

Preceding gene: 46447450

Following gene: 46447447

Centisome position: 89.9

GC content: 32.77

Gene sequence:

>1416_bases
ATGAATCTACCTGTTTTTAGTGCGCTGCAGATCACTGCTTTACTTTCTGAGATACGTCAACAATTGATTGGACTTTCTTA
TTTTATTTGTCATTCCCATAAAACAACCCAATTTTTTCTTCAATTTAAAGAGGAAAATAACGTCAAAACCCTTTTTTTAA
GTTTTCAGACCCCTTTGATATGCTTTTATTTAACAGAACAAAAAATTTTTCCTCTTGCAAACTTGATGGAAAATTCTTGG
CAACATTATTTATCAGAGGCAATTCTGGTAGAGATTGAACAATTAAATCAAGATCGTATTTTGAAATTTGGCTTTAGAAA
AAATCAAAGCCAATTTTCCCTTATATGCGAGTTTTTTACGAAACACCCTAATTATTACCTTTTAGATGAACAGGGAAAAA
TTTTATATTCTCTTTATCCTGTATTAAAAAAAATTTATCAATTACCCTTTCTTTCTCCTTTACAGGTACAGCCTTCTGTC
GTTTTAAAAGATTCTAAACAGCTAGAAGAAATTTATAAAAGAGCTGAACAGGAATGGTTTTTTCAACGAGACAAGTCGGC
GTTGGAAAAAGATTTAAGTAAGGGCATAAAAAAACTTCAAAAAAAACGAGAAAACTTATTAAAAGCAGAAAGAGAGTGCC
TTGATTGGGAAACCATTCAACATGAAGGAGAACTTTTAAAGTCTTCTTTCTCTCAACTTAAAAAAGGAATGTCTCAATTA
ACGCTTTGGGATTGGTTAAAAAACCAAGAAGTATGTTTAAAGCTTGATCCAGAGCTCCTTCCTAGTGAACAACTCAAATA
TCGCTTTAAAAAAGCTAAAAAACTTCGAATAGGTTTACCACATTTAGAAAAACAACTTCTCTACGTCGATCAAGATTTAC
TTACGCAAGTCGATCAATTAAATAGGCTGCAAAAAACGACCAGGATTGAAGAATTAAGTTCTTTCAAATCTAAAAAATTA
GTTCTTCGAAAAGCTGCAGAACAATTACAAAAAAAACAACTACCTTATAGAGAATTTTTATCAAGCACTAATACCACAAT
TTGGGTGGGAAAAAATGATAAGGGCAATGATCAGATGACATTTGCCCTGGCTAAAGGTTCTGATTGGTGGTTACATACAC
AAGATGTTCCTGGATCACATATTGTGATTCGGACTAAAAAAGGTCAAGATCCCGATGAAGAAACTTTAGCCGATGCCATG
CAACTAGCACTTTATAACAGTAAAGCCAAAGTTAGGCAAGAAGCAGAAATTTGCATGACTCAACGAAAGTTTCTTTCAAG
AATGGGAAAAAAACAGCTTGGAAAAGTACAAATCTCAAAACATCGATCTGTTTGGATTCGCTTTGATTTAGAGCGTTATC
AAGCCATTCTAAAAAGACAAAAGTTGACAAATGAGCGATTTTTTTCTTTTGAATAA

Upstream 100 bases:

>100_bases
TATGCAACACCACCCATTTTCTGCGTATTTGAATCAACTAAATAATTAACGTTATTTATCCACGTTGACGAAAACTTAAT
ATTTCTTGGATAATAAAAAC

Downstream 100 bases:

>100_bases
CTTAATTTTGCATGATATTATGAAGGATTGTTTTTTTCTCAATCGTTAAAAAAACACGAATCCATGATAACTGTTTTTCT
TGAGAGATAAAAATCCGATT

Product: putative fibronectin/fibrinogen binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MNLPVFSALQITALLSEIRQQLIGLSYFICHSHKTTQFFLQFKEENNVKTLFLSFQTPLICFYLTEQKIFPLANLMENSW
QHYLSEAILVEIEQLNQDRILKFGFRKNQSQFSLICEFFTKHPNYYLLDEQGKILYSLYPVLKKIYQLPFLSPLQVQPSV
VLKDSKQLEEIYKRAEQEWFFQRDKSALEKDLSKGIKKLQKKRENLLKAERECLDWETIQHEGELLKSSFSQLKKGMSQL
TLWDWLKNQEVCLKLDPELLPSEQLKYRFKKAKKLRIGLPHLEKQLLYVDQDLLTQVDQLNRLQKTTRIEELSSFKSKKL
VLRKAAEQLQKKQLPYREFLSSTNTTIWVGKNDKGNDQMTFALAKGSDWWLHTQDVPGSHIVIRTKKGQDPDEETLADAM
QLALYNSKAKVRQEAEICMTQRKFLSRMGKKQLGKVQISKHRSVWIRFDLERYQAILKRQKLTNERFFSFE

Sequences:

>Translated_471_residues
MNLPVFSALQITALLSEIRQQLIGLSYFICHSHKTTQFFLQFKEENNVKTLFLSFQTPLICFYLTEQKIFPLANLMENSW
QHYLSEAILVEIEQLNQDRILKFGFRKNQSQFSLICEFFTKHPNYYLLDEQGKILYSLYPVLKKIYQLPFLSPLQVQPSV
VLKDSKQLEEIYKRAEQEWFFQRDKSALEKDLSKGIKKLQKKRENLLKAERECLDWETIQHEGELLKSSFSQLKKGMSQL
TLWDWLKNQEVCLKLDPELLPSEQLKYRFKKAKKLRIGLPHLEKQLLYVDQDLLTQVDQLNRLQKTTRIEELSSFKSKKL
VLRKAAEQLQKKQLPYREFLSSTNTTIWVGKNDKGNDQMTFALAKGSDWWLHTQDVPGSHIVIRTKKGQDPDEETLADAM
QLALYNSKAKVRQEAEICMTQRKFLSRMGKKQLGKVQISKHRSVWIRFDLERYQAILKRQKLTNERFFSFE
>Mature_471_residues
MNLPVFSALQITALLSEIRQQLIGLSYFICHSHKTTQFFLQFKEENNVKTLFLSFQTPLICFYLTEQKIFPLANLMENSW
QHYLSEAILVEIEQLNQDRILKFGFRKNQSQFSLICEFFTKHPNYYLLDEQGKILYSLYPVLKKIYQLPFLSPLQVQPSV
VLKDSKQLEEIYKRAEQEWFFQRDKSALEKDLSKGIKKLQKKRENLLKAERECLDWETIQHEGELLKSSFSQLKKGMSQL
TLWDWLKNQEVCLKLDPELLPSEQLKYRFKKAKKLRIGLPHLEKQLLYVDQDLLTQVDQLNRLQKTTRIEELSSFKSKKL
VLRKAAEQLQKKQLPYREFLSSTNTTIWVGKNDKGNDQMTFALAKGSDWWLHTQDVPGSHIVIRTKKGQDPDEETLADAM
QLALYNSKAKVRQEAEICMTQRKFLSRMGKKQLGKVQISKHRSVWIRFDLERYQAILKRQKLTNERFFSFE

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 55794; Mature: 55794

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPVFSALQITALLSEIRQQLIGLSYFICHSHKTTQFFLQFKEENNVKTLFLSFQTPLI
CCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCEEEEEEEECCCCEEEEEEEECCCEE
CFYLTEQKIFPLANLMENSWQHYLSEAILVEIEQLNQDRILKFGFRKNQSQFSLICEFFT
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH
KHPNYYLLDEQGKILYSLYPVLKKIYQLPFLSPLQVQPSVVLKDSKQLEEIYKRAEQEWF
CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
FQRDKSALEKDLSKGIKKLQKKRENLLKAERECLDWETIQHEGELLKSSFSQLKKGMSQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLWDWLKNQEVCLKLDPELLPSEQLKYRFKKAKKLRIGLPHLEKQLLYVDQDLLTQVDQL
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHH
NRLQKTTRIEELSSFKSKKLVLRKAAEQLQKKQLPYREFLSSTNTTIWVGKNDKGNDQMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCEEE
FALAKGSDWWLHTQDVPGSHIVIRTKKGQDPDEETLADAMQLALYNSKAKVRQEAEICMT
EEEECCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QRKFLSRMGKKQLGKVQISKHRSVWIRFDLERYQAILKRQKLTNERFFSFE
HHHHHHHHCHHHHCCEEEECCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLPVFSALQITALLSEIRQQLIGLSYFICHSHKTTQFFLQFKEENNVKTLFLSFQTPLI
CCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCEEEEEEEECCCCEEEEEEEECCCEE
CFYLTEQKIFPLANLMENSWQHYLSEAILVEIEQLNQDRILKFGFRKNQSQFSLICEFFT
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH
KHPNYYLLDEQGKILYSLYPVLKKIYQLPFLSPLQVQPSVVLKDSKQLEEIYKRAEQEWF
CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
FQRDKSALEKDLSKGIKKLQKKRENLLKAERECLDWETIQHEGELLKSSFSQLKKGMSQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLWDWLKNQEVCLKLDPELLPSEQLKYRFKKAKKLRIGLPHLEKQLLYVDQDLLTQVDQL
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHH
NRLQKTTRIEELSSFKSKKLVLRKAAEQLQKKQLPYREFLSSTNTTIWVGKNDKGNDQMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCEEE
FALAKGSDWWLHTQDVPGSHIVIRTKKGQDPDEETLADAMQLALYNSKAKVRQEAEICMT
EEEECCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QRKFLSRMGKKQLGKVQISKHRSVWIRFDLERYQAILKRQKLTNERFFSFE
HHHHHHHHCHHHHCCEEEECCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]