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The map label for this gene is 46447447

Identifier: 46447447

GI number: 46447447

Start: 2167542

End: 2168333

Strand: Reverse

Name: 46447447

Synonym: pc1813

Alternate gene names: NA

Gene position: 2168333-2167542 (Counterclockwise)

Preceding gene: 46447449

Following gene: 46447446

Centisome position: 89.81

GC content: 29.42

Gene sequence:

>792_bases
ATGTTAAGAAAAGTCTCTTCTTCTCCCTATTATAATCAAATGATAAAAACGGTCATGCCTTTACATAGCTTTGGGATTAA
CCATTTTTGGTATTATAAAATTACTTTTTCGGGTGATTATTCTTATTTAGGAACACATTCATCATGGAATGAATTTTGTT
TTGATAATAATATGCTAAGTTATTTTTCTTGTTTACGTCATCCTGATTATTTGCAAAAAGGGATTAATTTAATGAAAACA
AATGTTGATAAAAACTATAAAAAAGTTTTAGACATTGCTTGGAACGATTTTCAAATTAATTTTAACATTAATCTAATTTA
TAACACAACTGAAGGGGTGGAAGCGTATGGATTTGCTACTCGCTTTAATGATCCTTATGCTGAGCAAAGATTATTAAACG
AGTTACCAGCTTTACGCTTTTTTATTAAAAAATTTAGGAAAGAAAATAAAAAAATTTTTGACTTAATAGATGATCATCCA
GTTAACCTTTCTAAACAATTTGGTTCACTATTCTATGAACAGCCTACAATACCGGTTGTTCCTAATAAGAAAGACGAATT
TATGAAGAAAATGGGTTTCAATGAAATTTTTTCACTAACTCCTCGAGAAAGCGATCTCGTTAAATTTCTATCAAATGGTT
ATCCGGCTCATTATATCGCTACAAAGCTTGAATTATCTAAACGAACCGTAGAGAATTATATCGTGACAATAAAATGCAAG
CTAGGTTGCACTTCTAAAGTTGAACTTATTCAAAAAGCTCAGGAAATTATATCAACAGGCTATTTTGATTAG

Upstream 100 bases:

>100_bases
CCGCTAAAACTGAAAAATGACGTTTCATAAGTGCCCAAATCATAAGATTAAAATTATTAATAACAATTTAAATTTTTAAA
AAATGAAACCATTTCAAGAA

Downstream 100 bases:

>100_bases
ATGCATATTAATTTTAACTTATCGTCCTTAAAGGGGGAGCACTAGTAATTTCTCAATACTCATCTGTTCCAGCAATCGAA
CCTCAATTTTTTTCTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLRKVSSSPYYNQMIKTVMPLHSFGINHFWYYKITFSGDYSYLGTHSSWNEFCFDNNMLSYFSCLRHPDYLQKGINLMKT
NVDKNYKKVLDIAWNDFQINFNINLIYNTTEGVEAYGFATRFNDPYAEQRLLNELPALRFFIKKFRKENKKIFDLIDDHP
VNLSKQFGSLFYEQPTIPVVPNKKDEFMKKMGFNEIFSLTPRESDLVKFLSNGYPAHYIATKLELSKRTVENYIVTIKCK
LGCTSKVELIQKAQEIISTGYFD

Sequences:

>Translated_263_residues
MLRKVSSSPYYNQMIKTVMPLHSFGINHFWYYKITFSGDYSYLGTHSSWNEFCFDNNMLSYFSCLRHPDYLQKGINLMKT
NVDKNYKKVLDIAWNDFQINFNINLIYNTTEGVEAYGFATRFNDPYAEQRLLNELPALRFFIKKFRKENKKIFDLIDDHP
VNLSKQFGSLFYEQPTIPVVPNKKDEFMKKMGFNEIFSLTPRESDLVKFLSNGYPAHYIATKLELSKRTVENYIVTIKCK
LGCTSKVELIQKAQEIISTGYFD
>Mature_263_residues
MLRKVSSSPYYNQMIKTVMPLHSFGINHFWYYKITFSGDYSYLGTHSSWNEFCFDNNMLSYFSCLRHPDYLQKGINLMKT
NVDKNYKKVLDIAWNDFQINFNINLIYNTTEGVEAYGFATRFNDPYAEQRLLNELPALRFFIKKFRKENKKIFDLIDDHP
VNLSKQFGSLFYEQPTIPVVPNKKDEFMKKMGFNEIFSLTPRESDLVKFLSNGYPAHYIATKLELSKRTVENYIVTIKCK
LGCTSKVELIQKAQEIISTGYFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30964; Mature: 30964

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKVSSSPYYNQMIKTVMPLHSFGINHFWYYKITFSGDYSYLGTHSSWNEFCFDNNMLS
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEECCCCCCHHHHCCCCHHH
YFSCLRHPDYLQKGINLMKTNVDKNYKKVLDIAWNDFQINFNINLIYNTTEGVEAYGFAT
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHEEECEEEEEEEEEEEEECCCCCCHHEEHC
RFNDPYAEQRLLNELPALRFFIKKFRKENKKIFDLIDDHPVNLSKQFGSLFYEQPTIPVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PNKKDEFMKKMGFNEIFSLTPRESDLVKFLSNGYPAHYIATKLELSKRTVENYIVTIKCK
CCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEE
LGCTSKVELIQKAQEIISTGYFD
CCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRKVSSSPYYNQMIKTVMPLHSFGINHFWYYKITFSGDYSYLGTHSSWNEFCFDNNMLS
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEECCCCCCHHHHCCCCHHH
YFSCLRHPDYLQKGINLMKTNVDKNYKKVLDIAWNDFQINFNINLIYNTTEGVEAYGFAT
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHEEECEEEEEEEEEEEEECCCCCCHHEEHC
RFNDPYAEQRLLNELPALRFFIKKFRKENKKIFDLIDDHPVNLSKQFGSLFYEQPTIPVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PNKKDEFMKKMGFNEIFSLTPRESDLVKFLSNGYPAHYIATKLELSKRTVENYIVTIKCK
CCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEE
LGCTSKVELIQKAQEIISTGYFD
CCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA