Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447334

Identifier: 46447334

GI number: 46447334

Start: 2038490

End: 2038993

Strand: Reverse

Name: 46447334

Synonym: pc1700

Alternate gene names: NA

Gene position: 2038993-2038490 (Counterclockwise)

Preceding gene: 46447337

Following gene: 46447328

Centisome position: 84.45

GC content: 35.12

Gene sequence:

>504_bases
ATGAAGCAAATTATTTCGTATGTCTATTGTACAATTGCGTTAAGTTGCTTTCAGCTCATTGGTGCTACCGAGCATGCGGA
TTTAGATGTCGATTCACCAGTATGTACTAAGCAGGAGTTGATGGCTTATTTTCCTCAGATCCTTGTCAGAAAAATTTTAC
TCAAATCTAATATTCAGGAGCAGCAAGCTAGGGCAATTGCAGAAGAGCTGGCTCAAAAAGGACAAGAATTAGAGAAAATT
GTGGCCGAAAAAGCTTCTAAACTAGATCCGAATCCTTTTAAAGATCTTAGTCAACGGGATGTTGCTATTAAAATTTATCG
AGAAACTCTTTATGAGATTTTTGCGAAAGTTTTAAAAAATCACGGCATTACTGATGGAAATCAAATTCAAATTCTTTTAG
ATAAGATGCAGTTAGCTAAAAGTAAAATGTTTATAGATTGCATTCGCAAAGAACAAACTTCTGCCAAGAAGGTTTTGGAA
CATGAAACTTCTCCATCTTCATAA

Upstream 100 bases:

>100_bases
AGCCACCTGATACAAATAAGACAAGCGAGCATCAACGAAAGCGCTTTAAATAAGGCACCTATCAATGAAATTCTAAAGAT
TGAATGTAAGGAGAATTAAC

Downstream 100 bases:

>100_bases
TTTCTTTTTAAGTCGCAATTGTTCAAAATATTCTAATCGTTTTTTAAGCTCGCGTTCGAACCCTCTTTCGACAGGCTCAT
AGAAATGTTGCTTTTCTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQEQQARAIAEELAQKGQELEKI
VAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKNHGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLE
HETSPSS

Sequences:

>Translated_167_residues
MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQEQQARAIAEELAQKGQELEKI
VAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKNHGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLE
HETSPSS
>Mature_167_residues
MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQEQQARAIAEELAQKGQELEKI
VAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKNHGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLE
HETSPSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18986; Mature: 18986

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
QQARAIAEELAQKGQELEKIVAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLEHETSPSS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
QQARAIAEELAQKGQELEKIVAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLEHETSPSS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA