Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447334
Identifier: 46447334
GI number: 46447334
Start: 2038490
End: 2038993
Strand: Reverse
Name: 46447334
Synonym: pc1700
Alternate gene names: NA
Gene position: 2038993-2038490 (Counterclockwise)
Preceding gene: 46447337
Following gene: 46447328
Centisome position: 84.45
GC content: 35.12
Gene sequence:
>504_bases ATGAAGCAAATTATTTCGTATGTCTATTGTACAATTGCGTTAAGTTGCTTTCAGCTCATTGGTGCTACCGAGCATGCGGA TTTAGATGTCGATTCACCAGTATGTACTAAGCAGGAGTTGATGGCTTATTTTCCTCAGATCCTTGTCAGAAAAATTTTAC TCAAATCTAATATTCAGGAGCAGCAAGCTAGGGCAATTGCAGAAGAGCTGGCTCAAAAAGGACAAGAATTAGAGAAAATT GTGGCCGAAAAAGCTTCTAAACTAGATCCGAATCCTTTTAAAGATCTTAGTCAACGGGATGTTGCTATTAAAATTTATCG AGAAACTCTTTATGAGATTTTTGCGAAAGTTTTAAAAAATCACGGCATTACTGATGGAAATCAAATTCAAATTCTTTTAG ATAAGATGCAGTTAGCTAAAAGTAAAATGTTTATAGATTGCATTCGCAAAGAACAAACTTCTGCCAAGAAGGTTTTGGAA CATGAAACTTCTCCATCTTCATAA
Upstream 100 bases:
>100_bases AGCCACCTGATACAAATAAGACAAGCGAGCATCAACGAAAGCGCTTTAAATAAGGCACCTATCAATGAAATTCTAAAGAT TGAATGTAAGGAGAATTAAC
Downstream 100 bases:
>100_bases TTTCTTTTTAAGTCGCAATTGTTCAAAATATTCTAATCGTTTTTTAAGCTCGCGTTCGAACCCTCTTTCGACAGGCTCAT AGAAATGTTGCTTTTCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQEQQARAIAEELAQKGQELEKI VAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKNHGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLE HETSPSS
Sequences:
>Translated_167_residues MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQEQQARAIAEELAQKGQELEKI VAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKNHGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLE HETSPSS >Mature_167_residues MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQEQQARAIAEELAQKGQELEKI VAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKNHGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLE HETSPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18986; Mature: 18986
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH QQARAIAEELAQKGQELEKIVAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLEHETSPSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKQIISYVYCTIALSCFQLIGATEHADLDVDSPVCTKQELMAYFPQILVRKILLKSNIQE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH QQARAIAEELAQKGQELEKIVAEKASKLDPNPFKDLSQRDVAIKIYRETLYEIFAKVLKN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGITDGNQIQILLDKMQLAKSKMFIDCIRKEQTSAKKVLEHETSPSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA