Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447337
Identifier: 46447337
GI number: 46447337
Start: 2041522
End: 2041782
Strand: Reverse
Name: 46447337
Synonym: pc1703
Alternate gene names: NA
Gene position: 2041782-2041522 (Counterclockwise)
Preceding gene: 46447343
Following gene: 46447334
Centisome position: 84.56
GC content: 32.57
Gene sequence:
>261_bases ATGAGAACAAAAATGAATCCTCCAAATTACGATAATCAAAAACCTGTTTCTTCCAAGAGGCAATACGACGAAATTGATCA ATTGGCAGAGTTTATTTTAGATAGTTTAGAAGAATCTCATCAATCAGAATGGGAACCTTTTGAAGTGTATGCAAAAAACT TACGTTCTCATATTTATGCAGATCAACGTGTTTTTCGCCAGAAATTTACTAAAGGTTATGAATCCCTTTTAGAAGTTTTA AGTCATCGTCACTCTAGTTAA
Upstream 100 bases:
>100_bases TTAAGATTGCATGAATGTATGAAAAGAATGCGATCTTAGGGAAAAAGTGAAGTAAGGCAAGGGGCTTTATTTCTGTTTTT AAATAGCTTAAATGAAATAA
Downstream 100 bases:
>100_bases TCTAAATCGACGAAAAATTGTTACTTAAACTGCGAGTATGGCTTAACCATACCTTTCAAAGAATAAATAATTACAGACTT TGTTGAGCCTGTAACTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MRTKMNPPNYDNQKPVSSKRQYDEIDQLAEFILDSLEESHQSEWEPFEVYAKNLRSHIYADQRVFRQKFTKGYESLLEVL SHRHSS
Sequences:
>Translated_86_residues MRTKMNPPNYDNQKPVSSKRQYDEIDQLAEFILDSLEESHQSEWEPFEVYAKNLRSHIYADQRVFRQKFTKGYESLLEVL SHRHSS >Mature_86_residues MRTKMNPPNYDNQKPVSSKRQYDEIDQLAEFILDSLEESHQSEWEPFEVYAKNLRSHIYADQRVFRQKFTKGYESLLEVL SHRHSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10349; Mature: 10349
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKMNPPNYDNQKPVSSKRQYDEIDQLAEFILDSLEESHQSEWEPFEVYAKNLRSHIYA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DQRVFRQKFTKGYESLLEVLSHRHSS HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTKMNPPNYDNQKPVSSKRQYDEIDQLAEFILDSLEESHQSEWEPFEVYAKNLRSHIYA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DQRVFRQKFTKGYESLLEVLSHRHSS HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA