Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447328

Identifier: 46447328

GI number: 46447328

Start: 2031353

End: 2033209

Strand: Reverse

Name: 46447328

Synonym: pc1694

Alternate gene names: NA

Gene position: 2033209-2031353 (Counterclockwise)

Preceding gene: 46447334

Following gene: 46447327

Centisome position: 84.21

GC content: 35.97

Gene sequence:

>1857_bases
ATGATTGTTTCCAATTGGCAGCCTCCTTCTCGAAATACTTCTTCTATTTCAGATAATTCGCCACCTCCTTCAGAGGTTTA
TAAAGGGGGGAAAATAGGGGTACATAGAACTTCAGATTTGACAGGTGATGATTCAACGACTTCTTTGGTTGCGGCACCAA
AAATACAAGGACTGCCAGATACCACATTTGAAATAAGCGATTTCAGTGTGACATTAGCTCCCATAGATCAGGATGTGGTT
ACAAGAATTAATCAAGCTGTTACCCCACTTGTTGCTCCACAAGATGAGATCATTGATGGCAATTTGCCAGATACCTCTTC
TTCGTTGGTAGATGATGATGACCCTATTCAAGATTTAGAAGATGCTTCTAGGACGATTGGAGCTGATAACTCTGATATAG
GGATTGAATCTGATGTTGAAAGTGATATCGAATTACAGTTTACCCAAACAACTCCCTTGCAGGCAGGGGAAACATATAAA
ATCGAAGATATGGGGGTTAATACAAATATTAATGTTCCCCCTCAGCGGATGTTAACGGATGCAATTGCTAAAGCAAAACA
AGTTGCTGGTTTTGAGAATGCGACTGTTAAGATTAAATCAAGTTTAGATGGAAAACTTAAAGAAGCGGAAAGAAATAATG
TTATTCCTAATTATAAAGTTGAACGTTATGTCAACGACCATGGGGTAGGACTTTTTAAAGTTAGCGTTGATTATGTAGTT
GAATTAAAGACCGAGACGGATCCTCCTGAAAAAATGCATTTAAAGTTGACAAGAGAGTTTTTCTCTAATGCAAATAATGA
GAATGAAGCGCTTTTAGCTGTTTATCATGTTTCAAGATCTATTCAAAAAGGAGCTATTGATGGAAAAACAGAGACTGAAA
CCACAAGTTTTAATTTGACTTATGCACGCGATCCAGAATCTCACAAAGTGGTTGGGGTAGAACGTGTCATGGCTGGTGAA
GTTGATGTAACTCAATCTCTCAAGAAAAAATATACAAGAGAAATGGGAGAAGATGGAACAATCGCGTTAAAACGAGCTAA
ACAAGAAAAGGCGGAAGTATCCAAAGAAAGTCGGTTATTAAATGCTAACGTGTCAGTGGCCAATTTGACTTCTATAGAAG
TAATAAAAAAAATGAAAGGTGGGGTAAATGCTTATATTAAAATACAACAAAACGAAATGAATTCATTTGAAGTTAGAATA
AATAGTCTTCAAAAAGAAATTGAACAACATGAATTAGTGCAAGGGATGATAGCACAAGACAAAAAGAAGTTTGAAACTTT
ACTTGAGGAATTGAAAAAGGGGGAAGCCGATTTGAGCAGTCTTGAATTACCAGTAGTTGTGATTAATTACTTATCCAGTA
AACAAGCTCTTATTCAATTGAAAGTTAAAGGCTCAGACACGTCAGAAGCAGAAATTTATTACAATCAACAGAGAAACCTG
TTTTTTGAAGAATTTAAAGCATTATTTAGGCAACTTGACAGTTTCCAAAATATTCAAAGAAAACTGCAATCTAAACAAAT
AGAACTCCAACAGGTTAAAGTCAATTTGCGAAATCAACCTGATGTGGATGAAAGCATTATTGCAAAACAAGAACAACAAA
TGGATGCATTATTACACAAAGTTGATCAAGAAATCAAAACGAACAATCAATTATTATTTGTTCAAAAACAATTAGGGCAT
TTGATGAAAAAAGAAGAAACGCCTTATGCTGATAGACTTGAAAATTCCTCAGTACCCACAGCTTCCGCATCTGAAACTTC
TACATTAAGTACTCCATCAAACGGTATGCCTGATGTAATTGTTGCATCCGACGACGATGTGTTTGGTGCTGTTTCTGTTA
TGCCGATGAATGAATGA

Upstream 100 bases:

>100_bases
ATTATAAATTTTAATTTTATTTATCTATATAGTTGTTTATTGATGATCAATAGTTAATTATGATAAAATAAAAATTAGAA
ATTAATAAATAGGTTCATAT

Downstream 100 bases:

>100_bases
ATTTATTAGGAAGTTTAGCAAAGAGTTCAAAAGCAGGCAAAAGTTTAAACTAAGTGGGATATTGACCCTTAAAATTTATT
TTCTCAGTTCATTTATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MIVSNWQPPSRNTSSISDNSPPPSEVYKGGKIGVHRTSDLTGDDSTTSLVAAPKIQGLPDTTFEISDFSVTLAPIDQDVV
TRINQAVTPLVAPQDEIIDGNLPDTSSSLVDDDDPIQDLEDASRTIGADNSDIGIESDVESDIELQFTQTTPLQAGETYK
IEDMGVNTNINVPPQRMLTDAIAKAKQVAGFENATVKIKSSLDGKLKEAERNNVIPNYKVERYVNDHGVGLFKVSVDYVV
ELKTETDPPEKMHLKLTREFFSNANNENEALLAVYHVSRSIQKGAIDGKTETETTSFNLTYARDPESHKVVGVERVMAGE
VDVTQSLKKKYTREMGEDGTIALKRAKQEKAEVSKESRLLNANVSVANLTSIEVIKKMKGGVNAYIKIQQNEMNSFEVRI
NSLQKEIEQHELVQGMIAQDKKKFETLLEELKKGEADLSSLELPVVVINYLSSKQALIQLKVKGSDTSEAEIYYNQQRNL
FFEEFKALFRQLDSFQNIQRKLQSKQIELQQVKVNLRNQPDVDESIIAKQEQQMDALLHKVDQEIKTNNQLLFVQKQLGH
LMKKEETPYADRLENSSVPTASASETSTLSTPSNGMPDVIVASDDDVFGAVSVMPMNE

Sequences:

>Translated_618_residues
MIVSNWQPPSRNTSSISDNSPPPSEVYKGGKIGVHRTSDLTGDDSTTSLVAAPKIQGLPDTTFEISDFSVTLAPIDQDVV
TRINQAVTPLVAPQDEIIDGNLPDTSSSLVDDDDPIQDLEDASRTIGADNSDIGIESDVESDIELQFTQTTPLQAGETYK
IEDMGVNTNINVPPQRMLTDAIAKAKQVAGFENATVKIKSSLDGKLKEAERNNVIPNYKVERYVNDHGVGLFKVSVDYVV
ELKTETDPPEKMHLKLTREFFSNANNENEALLAVYHVSRSIQKGAIDGKTETETTSFNLTYARDPESHKVVGVERVMAGE
VDVTQSLKKKYTREMGEDGTIALKRAKQEKAEVSKESRLLNANVSVANLTSIEVIKKMKGGVNAYIKIQQNEMNSFEVRI
NSLQKEIEQHELVQGMIAQDKKKFETLLEELKKGEADLSSLELPVVVINYLSSKQALIQLKVKGSDTSEAEIYYNQQRNL
FFEEFKALFRQLDSFQNIQRKLQSKQIELQQVKVNLRNQPDVDESIIAKQEQQMDALLHKVDQEIKTNNQLLFVQKQLGH
LMKKEETPYADRLENSSVPTASASETSTLSTPSNGMPDVIVASDDDVFGAVSVMPMNE
>Mature_618_residues
MIVSNWQPPSRNTSSISDNSPPPSEVYKGGKIGVHRTSDLTGDDSTTSLVAAPKIQGLPDTTFEISDFSVTLAPIDQDVV
TRINQAVTPLVAPQDEIIDGNLPDTSSSLVDDDDPIQDLEDASRTIGADNSDIGIESDVESDIELQFTQTTPLQAGETYK
IEDMGVNTNINVPPQRMLTDAIAKAKQVAGFENATVKIKSSLDGKLKEAERNNVIPNYKVERYVNDHGVGLFKVSVDYVV
ELKTETDPPEKMHLKLTREFFSNANNENEALLAVYHVSRSIQKGAIDGKTETETTSFNLTYARDPESHKVVGVERVMAGE
VDVTQSLKKKYTREMGEDGTIALKRAKQEKAEVSKESRLLNANVSVANLTSIEVIKKMKGGVNAYIKIQQNEMNSFEVRI
NSLQKEIEQHELVQGMIAQDKKKFETLLEELKKGEADLSSLELPVVVINYLSSKQALIQLKVKGSDTSEAEIYYNQQRNL
FFEEFKALFRQLDSFQNIQRKLQSKQIELQQVKVNLRNQPDVDESIIAKQEQQMDALLHKVDQEIKTNNQLLFVQKQLGH
LMKKEETPYADRLENSSVPTASASETSTLSTPSNGMPDVIVASDDDVFGAVSVMPMNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68671; Mature: 68671

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSNWQPPSRNTSSISDNSPPPSEVYKGGKIGVHRTSDLTGDDSTTSLVAAPKIQGLPD
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCC
TTFEISDFSVTLAPIDQDVVTRINQAVTPLVAPQDEIIDGNLPDTSSSLVDDDDPIQDLE
CEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHH
DASRTIGADNSDIGIESDVESDIELQFTQTTPLQAGETYKIEDMGVNTNINVPPQRMLTD
HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
AIAKAKQVAGFENATVKIKSSLDGKLKEAERNNVIPNYKVERYVNDHGVGLFKVSVDYVV
HHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEEE
ELKTETDPPEKMHLKLTREFFSNANNENEALLAVYHVSRSIQKGAIDGKTETETTSFNLT
EEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEEEEEE
YARDPESHKVVGVERVMAGEVDVTQSLKKKYTREMGEDGTIALKRAKQEKAEVSKESRLL
ECCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHEE
NANVSVANLTSIEVIKKMKGGVNAYIKIQQNEMNSFEVRINSLQKEIEQHELVQGMIAQD
ECCCEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKKFETLLEELKKGEADLSSLELPVVVINYLSSKQALIQLKVKGSDTSEAEIYYNQQRNL
HHHHHHHHHHHHCCCCCHHHCCCHHHEEHHHCCCEEEEEEEEECCCCCCEEEEECCCCCH
FFEEFKALFRQLDSFQNIQRKLQSKQIELQQVKVNLRNQPDVDESIIAKQEQQMDALLHK
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
VDQEIKTNNQLLFVQKQLGHLMKKEETPYADRLENSSVPTASASETSTLSTPSNGMPDVI
HHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VASDDDVFGAVSVMPMNE
EECCCCCEEEEEEEECCC
>Mature Secondary Structure
MIVSNWQPPSRNTSSISDNSPPPSEVYKGGKIGVHRTSDLTGDDSTTSLVAAPKIQGLPD
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCC
TTFEISDFSVTLAPIDQDVVTRINQAVTPLVAPQDEIIDGNLPDTSSSLVDDDDPIQDLE
CEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHH
DASRTIGADNSDIGIESDVESDIELQFTQTTPLQAGETYKIEDMGVNTNINVPPQRMLTD
HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
AIAKAKQVAGFENATVKIKSSLDGKLKEAERNNVIPNYKVERYVNDHGVGLFKVSVDYVV
HHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEEE
ELKTETDPPEKMHLKLTREFFSNANNENEALLAVYHVSRSIQKGAIDGKTETETTSFNLT
EEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEEEEEE
YARDPESHKVVGVERVMAGEVDVTQSLKKKYTREMGEDGTIALKRAKQEKAEVSKESRLL
ECCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHEE
NANVSVANLTSIEVIKKMKGGVNAYIKIQQNEMNSFEVRINSLQKEIEQHELVQGMIAQD
ECCCEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKKFETLLEELKKGEADLSSLELPVVVINYLSSKQALIQLKVKGSDTSEAEIYYNQQRNL
HHHHHHHHHHHHCCCCCHHHCCCHHHEEHHHCCCEEEEEEEEECCCCCCEEEEECCCCCH
FFEEFKALFRQLDSFQNIQRKLQSKQIELQQVKVNLRNQPDVDESIIAKQEQQMDALLHK
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
VDQEIKTNNQLLFVQKQLGHLMKKEETPYADRLENSSVPTASASETSTLSTPSNGMPDVI
HHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VASDDDVFGAVSVMPMNE
EECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA