Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447327

Identifier: 46447327

GI number: 46447327

Start: 2029991

End: 2030932

Strand: Reverse

Name: 46447327

Synonym: pc1693

Alternate gene names: NA

Gene position: 2030932-2029991 (Counterclockwise)

Preceding gene: 46447328

Following gene: 46447326

Centisome position: 84.12

GC content: 31.74

Gene sequence:

>942_bases
ATGAAATTTTTTAGATTTAAAAACTTAGGGTGGGGGATTCTAGCCTTTGCTCCTATAGGATTAATCAGTTATTTTCTAAT
TTTAGAAGATGAACTGGATTCCAGGAATCTCACTTCACATGCTCGTTATAAATTTAAATGGGAAATCACAGCGATTCCTA
AAGAACTTGCTAAGATTGATAAAATTCTAGAACAACCTTTCTCTTACTTAGGCGAAGGTGGGCAATCTTATGTTTTCTCT
AGCGAAGATCAAAAATATGTATTAAAATTTTTTAAATTTAAGCGCTTCAAGCCAAGTTATTTAGTAAAAAAACTACCCAA
CTCCTATCCATTCAAAAATTATAGAGATAAACATATTGCTAAAAAAAAGCAAAAATTGATGAGAGTTTTGAAGGGACATA
AACTAGCTTACGATCTTCTTAAACGAGAGAGTGGGTTAATATTCATTCAACTTAACCCCTCAAACCTCTCTAAATGGATT
ACCTTAGTCGATAAAGGTAATCAAAAAAGAAAAGTAAATTTAGAAACTGTTTCTTACATCCTTCAAGAAAAAGGTGAAAT
GTTAAGTCAAGATTTAACTTATCTTCTTAATCAAGGTAATTTATCAATCGCAAAGCAACGCGTCGACCAAGTTTTAGGTC
TATATCTTTCTGAATATCAAAAAGGAATTTATGATTTAGATTATGGAATTATGCATAACATCGGCTGCCGAGAAAATAAA
GTTTTTCACTTAGATGTTGGGAAATTGATCGTCGATGAGCGGATGAAACAGCCAGAATTTTATCAAAAAAATATTGTTAA
AGTAGCTTCAAAACTCCAGGAATGGTTTTCTTCCAAGTATCCTCAATACTCTCGAGAGTTGATAGATCACCTAGAAAAAA
AACTATCAGTGATTTTAGATCGAAAATTTACATTTTCTCAATCAGCAGGTAGCGTAGAATAA

Upstream 100 bases:

>100_bases
CATTTTTTTATCCAGCAGTCATTTTGAGAAAAATATAAGAAAAAACAGTTTGATAGACTTTGGCCTTAATTTGAATCATT
TCTATTGGATTTAAGGTAAA

Downstream 100 bases:

>100_bases
TGATTCTGAAGAAAGTATTGATCGGATTAACATTTGTTTGCTTCATTTTCATTGGTTGGTGCAATTTGCCAGCGAAATTC
ATAGAAGAATCTAAAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKFFRFKNLGWGILAFAPIGLISYFLILEDELDSRNLTSHARYKFKWEITAIPKELAKIDKILEQPFSYLGEGGQSYVFS
SEDQKYVLKFFKFKRFKPSYLVKKLPNSYPFKNYRDKHIAKKKQKLMRVLKGHKLAYDLLKRESGLIFIQLNPSNLSKWI
TLVDKGNQKRKVNLETVSYILQEKGEMLSQDLTYLLNQGNLSIAKQRVDQVLGLYLSEYQKGIYDLDYGIMHNIGCRENK
VFHLDVGKLIVDERMKQPEFYQKNIVKVASKLQEWFSSKYPQYSRELIDHLEKKLSVILDRKFTFSQSAGSVE

Sequences:

>Translated_313_residues
MKFFRFKNLGWGILAFAPIGLISYFLILEDELDSRNLTSHARYKFKWEITAIPKELAKIDKILEQPFSYLGEGGQSYVFS
SEDQKYVLKFFKFKRFKPSYLVKKLPNSYPFKNYRDKHIAKKKQKLMRVLKGHKLAYDLLKRESGLIFIQLNPSNLSKWI
TLVDKGNQKRKVNLETVSYILQEKGEMLSQDLTYLLNQGNLSIAKQRVDQVLGLYLSEYQKGIYDLDYGIMHNIGCRENK
VFHLDVGKLIVDERMKQPEFYQKNIVKVASKLQEWFSSKYPQYSRELIDHLEKKLSVILDRKFTFSQSAGSVE
>Mature_313_residues
MKFFRFKNLGWGILAFAPIGLISYFLILEDELDSRNLTSHARYKFKWEITAIPKELAKIDKILEQPFSYLGEGGQSYVFS
SEDQKYVLKFFKFKRFKPSYLVKKLPNSYPFKNYRDKHIAKKKQKLMRVLKGHKLAYDLLKRESGLIFIQLNPSNLSKWI
TLVDKGNQKRKVNLETVSYILQEKGEMLSQDLTYLLNQGNLSIAKQRVDQVLGLYLSEYQKGIYDLDYGIMHNIGCRENK
VFHLDVGKLIVDERMKQPEFYQKNIVKVASKLQEWFSSKYPQYSRELIDHLEKKLSVILDRKFTFSQSAGSVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36817; Mature: 36817

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFRFKNLGWGILAFAPIGLISYFLILEDELDSRNLTSHARYKFKWEITAIPKELAKID
CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHH
KILEQPFSYLGEGGQSYVFSSEDQKYVLKFFKFKRFKPSYLVKKLPNSYPFKNYRDKHIA
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHH
KKKQKLMRVLKGHKLAYDLLKRESGLIFIQLNPSNLSKWITLVDKGNQKRKVNLETVSYI
HHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHEECCCCCCEEHHHHHHHH
LQEKGEMLSQDLTYLLNQGNLSIAKQRVDQVLGLYLSEYQKGIYDLDYGIMHNIGCRENK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCCCCCC
VFHLDVGKLIVDERMKQPEFYQKNIVKVASKLQEWFSSKYPQYSRELIDHLEKKLSVILD
EEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
RKFTFSQSAGSVE
CCCCCCCCCCCCC
>Mature Secondary Structure
MKFFRFKNLGWGILAFAPIGLISYFLILEDELDSRNLTSHARYKFKWEITAIPKELAKID
CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHH
KILEQPFSYLGEGGQSYVFSSEDQKYVLKFFKFKRFKPSYLVKKLPNSYPFKNYRDKHIA
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHH
KKKQKLMRVLKGHKLAYDLLKRESGLIFIQLNPSNLSKWITLVDKGNQKRKVNLETVSYI
HHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHEECCCCCCEEHHHHHHHH
LQEKGEMLSQDLTYLLNQGNLSIAKQRVDQVLGLYLSEYQKGIYDLDYGIMHNIGCRENK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCCCCCC
VFHLDVGKLIVDERMKQPEFYQKNIVKVASKLQEWFSSKYPQYSRELIDHLEKKLSVILD
EEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
RKFTFSQSAGSVE
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA