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The map label for this gene is atpE

Identifier: 46447307

GI number: 46447307

Start: 2010953

End: 2011249

Strand: Reverse

Name: atpE

Synonym: pc1673

Alternate gene names: 46447307

Gene position: 2011249-2010953 (Counterclockwise)

Preceding gene: 46447308

Following gene: 46447306

Centisome position: 83.3

GC content: 39.39

Gene sequence:

>297_bases
ATGCATTTAGCACGAAATCCAGCCCTGAAAAGCATTTACATTAAAATAAGAAAGAGGAAAACAATGAGTATTGGAACAGC
ATTAGCTCTCTCTGCTCCATTTGCAGTCGGTCTTGCAGCATTAGGATCAGGTCTTGGTCTTGGTCGTGCTGTGAGTAGTG
CAATGGAAGCTATAGGTCGTCAACCTGAAGCATCTGGTAAAATTTTGACGACAATGATTATTGGCGCTGCTTTGATTGAA
GCCCTAACAATTTATGCTTTAATTGTGTTCTTCGTTGTTTTAGAAAAAATGGCATAA

Upstream 100 bases:

>100_bases
AAAACTGATTTTTTTGCTATTAATTGGATAGTTAAAGTTCGTGATAGCAAAAAAGTAAATACCCTTCTTTTTATGCATAT
ATTTAATCGTTGCTAAACTC

Downstream 100 bases:

>100_bases
TTTAATTATGAATTTTGAAATTGAGCAAATTTTAACTCAAATCATCGCTTTTTTAATTATGCTAGGGGTTTTAAAAAAGT
TCGTTTGGAAACGCCTTCTT

Product: H+-transporting two-sector ATPase lipid-binding protein (chainC, atpE)

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MHLARNPALKSIYIKIRKRKTMSIGTALALSAPFAVGLAALGSGLGLGRAVSSAMEAIGRQPEASGKILTTMIIGAALIE
ALTIYALIVFFVVLEKMA

Sequences:

>Translated_98_residues
MHLARNPALKSIYIKIRKRKTMSIGTALALSAPFAVGLAALGSGLGLGRAVSSAMEAIGRQPEASGKILTTMIIGAALIE
ALTIYALIVFFVVLEKMA
>Mature_98_residues
MHLARNPALKSIYIKIRKRKTMSIGTALALSAPFAVGLAALGSGLGLGRAVSSAMEAIGRQPEASGKILTTMIIGAALIE
ALTIYALIVFFVVLEKMA

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_PARUW (Q6MAK2)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008672.1
- HSSP:   P00845
- ProteinModelPortal:   Q6MAK2
- SMR:   Q6MAK2
- STRING:   Q6MAK2
- GeneID:   2779827
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1673
- NMPDR:   fig|264201.1.peg.1673
- eggNOG:   NOG123901
- OMA:   RAVSSAM
- ProtClustDB:   CLSK2762449
- BioCyc:   CPRO264201:PC1673-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 10228; Mature: 10228

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd7805b0)-; HASH(0xdbc5148)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLARNPALKSIYIKIRKRKTMSIGTALALSAPFAVGLAALGSGLGLGRAVSSAMEAIGR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QPEASGKILTTMIIGAALIEALTIYALIVFFVVLEKMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MHLARNPALKSIYIKIRKRKTMSIGTALALSAPFAVGLAALGSGLGLGRAVSSAMEAIGR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QPEASGKILTTMIIGAALIEALTIYALIVFFVVLEKMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA