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The map label for this gene is atpF

Identifier: 46447306

GI number: 46447306

Start: 2010463

End: 2010945

Strand: Reverse

Name: atpF

Synonym: pc1672

Alternate gene names: 46447306

Gene position: 2010945-2010463 (Counterclockwise)

Preceding gene: 46447307

Following gene: 46447305

Centisome position: 83.29

GC content: 32.92

Gene sequence:

>483_bases
ATGAATTTTGAAATTGAGCAAATTTTAACTCAAATCATCGCTTTTTTAATTATGCTAGGGGTTTTAAAAAAGTTCGTTTG
GAAACGCCTTCTTAATTTAATAGAAGAGCGAAAGCAACTGATTCAATCAGAATTTGATAAAATCGAAAATCAAAAAGAAG
AAGTGACAAAGCTTTCTGAAGAGTATAAAGCTAAGTTACATGATATTGATGCTGAAGCTCGTCGGAGAATTCAAGAAGCC
GTTGTTAAAGGGAGAGATATTGCTCATGATATTGAGCAAGAAACTCGCCAAAAAGTAACTTCTCTTTTGAATAATGCTCA
GGAGGAAATGAAGCTAGAGTTAGCTCAAGCTAAAGAGCAATTGAAAAAAGATGTCATTAATATCTCCTTCGCTATTACAG
AAAAGCTTATCCATGAAAAAGTGGATATAAGTAAACATCAAAAATTAGTTGAAGAAGCTGTAGAGCAAGTTGAAATCCGA
TGA

Upstream 100 bases:

>100_bases
TTGACGACAATGATTATTGGCGCTGCTTTGATTGAAGCCCTAACAATTTATGCTTTAATTGTGTTCTTCGTTGTTTTAGA
AAAAATGGCATAATTTAATT

Downstream 100 bases:

>100_bases
TAGCTAAAGGTGTTTCTTTAAGATATTCAAAAGCTTTAGTAGATATTGCAACAAATCCAGAACAAATCAAAAGCCATTTG
TTGGCTTTAGAAGAGTTTGT

Product: putative H+-transporting two-sector ATPase (chain b, atpF)

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNFEIEQILTQIIAFLIMLGVLKKFVWKRLLNLIEERKQLIQSEFDKIENQKEEVTKLSEEYKAKLHDIDAEARRRIQEA
VVKGRDIAHDIEQETRQKVTSLLNNAQEEMKLELAQAKEQLKKDVINISFAITEKLIHEKVDISKHQKLVEEAVEQVEIR

Sequences:

>Translated_160_residues
MNFEIEQILTQIIAFLIMLGVLKKFVWKRLLNLIEERKQLIQSEFDKIENQKEEVTKLSEEYKAKLHDIDAEARRRIQEA
VVKGRDIAHDIEQETRQKVTSLLNNAQEEMKLELAQAKEQLKKDVINISFAITEKLIHEKVDISKHQKLVEEAVEQVEIR
>Mature_160_residues
MNFEIEQILTQIIAFLIMLGVLKKFVWKRLLNLIEERKQLIQSEFDKIENQKEEVTKLSEEYKAKLHDIDAEARRRIQEA
VVKGRDIAHDIEQETRQKVTSLLNNAQEEMKLELAQAKEQLKKDVINISFAITEKLIHEKVDISKHQKLVEEAVEQVEIR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PARUW (Q6MAK3)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008671.1
- STRING:   Q6MAK3
- GeneID:   2779828
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1672
- NMPDR:   fig|264201.1.peg.1672
- eggNOG:   COG0711
- OMA:   IRIMNER
- ProtClustDB:   CLSK2762448
- BioCyc:   CPRO264201:PC1672-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 18873; Mature: 18873

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe6d343c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEIEQILTQIIAFLIMLGVLKKFVWKRLLNLIEERKQLIQSEFDKIENQKEEVTKLSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYKAKLHDIDAEARRRIQEAVVKGRDIAHDIEQETRQKVTSLLNNAQEEMKLELAQAKEQ
HHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKDVINISFAITEKLIHEKVDISKHQKLVEEAVEQVEIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MNFEIEQILTQIIAFLIMLGVLKKFVWKRLLNLIEERKQLIQSEFDKIENQKEEVTKLSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYKAKLHDIDAEARRRIQEAVVKGRDIAHDIEQETRQKVTSLLNNAQEEMKLELAQAKEQ
HHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKDVINISFAITEKLIHEKVDISKHQKLVEEAVEQVEIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA