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The map label for this gene is atpH

Identifier: 46447305

GI number: 46447305

Start: 2009921

End: 2010466

Strand: Reverse

Name: atpH

Synonym: pc1671

Alternate gene names: 46447305

Gene position: 2010466-2009921 (Counterclockwise)

Preceding gene: 46447306

Following gene: 46447304

Centisome position: 83.27

GC content: 31.32

Gene sequence:

>546_bases
ATGATAGCTAAAGGTGTTTCTTTAAGATATTCAAAAGCTTTAGTAGATATTGCAACAAATCCAGAACAAATCAAAAGCCA
TTTGTTGGCTTTAGAAGAGTTTGTGGGGATATTGGAAACCATTCCTAAGCTAAAAGAATTATTATTTGATCCTCACCTCA
GTACTTTAACAAAAAAGAGTATCCTTCAACGATTGTTTAAAGATCGTTTAGATGAAACTATTTTAAATTTTCTGTTCGTG
TTAATTGAAAAAAATCGTTTTAAATACATTGTGGATATCAGAAAAGAATATCATCGCTTAGCTAAAAAACGGTTGGGAAT
TTTAGAAGTTCGCTTGTTAACTGCTGTTTCCGTGAGTGACATACCTCAAGAAAAAGTTCGAATAAAACTACAAAAAACTT
ATCAGAAAGAAGTTGAAATTCAAAATGTTGTCAATCCAGATATAGTTGGAGGGATGATTCTGATCATGGATCATCAAATT
TTTGATAACAGTGTGAAGAAAAGACTTGCAAAACTAAAAGTTAGCTTATTAACGGCTAAGGTCTAG

Upstream 100 bases:

>100_bases
ATATCTCCTTCGCTATTACAGAAAAGCTTATCCATGAAAAAGTGGATATAAGTAAACATCAAAAATTAGTTGAAGAAGCT
GTAGAGCAAGTTGAAATCCG

Downstream 100 bases:

>100_bases
GAGAGAGAATGCGTTTAAATCCTGAAGAAGTATCTTGGGTCATTCAACAAGAAATTGAAAAATATCATGAAGATCTCTCC
TTAAAATTTGAATCTGCTGG

Product: putative H+-transporting two-sector ATPase (delta chain, atpH)

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIAKGVSLRYSKALVDIATNPEQIKSHLLALEEFVGILETIPKLKELLFDPHLSTLTKKSILQRLFKDRLDETILNFLFV
LIEKNRFKYIVDIRKEYHRLAKKRLGILEVRLLTAVSVSDIPQEKVRIKLQKTYQKEVEIQNVVNPDIVGGMILIMDHQI
FDNSVKKRLAKLKVSLLTAKV

Sequences:

>Translated_181_residues
MIAKGVSLRYSKALVDIATNPEQIKSHLLALEEFVGILETIPKLKELLFDPHLSTLTKKSILQRLFKDRLDETILNFLFV
LIEKNRFKYIVDIRKEYHRLAKKRLGILEVRLLTAVSVSDIPQEKVRIKLQKTYQKEVEIQNVVNPDIVGGMILIMDHQI
FDNSVKKRLAKLKVSLLTAKV
>Mature_181_residues
MIAKGVSLRYSKALVDIATNPEQIKSHLLALEEFVGILETIPKLKELLFDPHLSTLTKKSILQRLFKDRLDETILNFLFV
LIEKNRFKYIVDIRKEYHRLAKKRLGILEVRLLTAVSVSDIPQEKVRIKLQKTYQKEVEIQNVVNPDIVGGMILIMDHQI
FDNSVKKRLAKLKVSLLTAKV

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_PARUW (Q6MAK4)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008670.1
- ProteinModelPortal:   Q6MAK4
- STRING:   Q6MAK4
- GeneID:   2779814
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1671
- NMPDR:   fig|264201.1.peg.1671
- eggNOG:   COG0712
- OMA:   NNIEVDA
- PhylomeDB:   Q6MAK4
- BioCyc:   CPRO264201:PC1671-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20915; Mature: 20915

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKGVSLRYSKALVDIATNPEQIKSHLLALEEFVGILETIPKLKELLFDPHLSTLTKKS
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILQRLFKDRLDETILNFLFVLIEKNRFKYIVDIRKEYHRLAKKRLGILEVRLLTAVSVSD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC
IPQEKVRIKLQKTYQKEVEIQNVVNPDIVGGMILIMDHQIFDNSVKKRLAKLKVSLLTAK
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure
MIAKGVSLRYSKALVDIATNPEQIKSHLLALEEFVGILETIPKLKELLFDPHLSTLTKKS
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILQRLFKDRLDETILNFLFVLIEKNRFKYIVDIRKEYHRLAKKRLGILEVRLLTAVSVSD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC
IPQEKVRIKLQKTYQKEVEIQNVVNPDIVGGMILIMDHQIFDNSVKKRLAKLKVSLLTAK
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA