Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447286

Identifier: 46447286

GI number: 46447286

Start: 1983718

End: 1984677

Strand: Reverse

Name: 46447286

Synonym: pc1652

Alternate gene names: NA

Gene position: 1984677-1983718 (Counterclockwise)

Preceding gene: 46447289

Following gene: 46447283

Centisome position: 82.2

GC content: 31.15

Gene sequence:

>960_bases
GTGACAAAACACGTCTTTTATCTCATTTTAGATAAATGTTTTATTTTAAATTTTATAGGAGTGTTAAATATGTCAATAAA
TTTAAATTCTTCAATGTGTAATTCCGTTTATCCCGTATTAGATCAACCGACATTGAATCAAACAACATTGAATCAACCAA
AAGAAAAAGTGTGTGAAGAAGTTGTGTTGAAAATAACTAACTGTTCTCATACTCCTGAGAATAAGCCTTGTGTTATAGGC
GAGAATAAACTTCCTGTTGAAGATGGGGTGAATTTTAGATCTTTTAATTGTCCTATTACCCTTTACCCATTTACAGATCC
TGTTGTAGATGAATGTGGCCATACATTTGAACGAGAAGCAATTATGGAAATTTATAACAGAGCAATTGCAGAAGGAACTT
CATTTACGTGTCCTTTGAATCCTAGTAAAATTCTCGACGTTAGCAAACTTATTAAAAATTATAATTTAGCTGGTGCTAAA
GAAGAAGTGGACGAATTTACTAAAAAACATACTTCTGAAAAAAAGACCTCCCTTGAGTTAATGAAAGAACTTATGCAAGA
GCATACACTAGAAAGGCGAGAGTATAAAACAGAAATGCAAAAATTAATAAGCAGGCATGAACGATTTTTAGAAGATTTTA
GGCCCCTTGCACGCGATACAGAAGAATCTTTAAATACAAGTGCTAATATTTTAAACCAATGTTCTATTCTTAAGGATAAA
AACGTCATTTTGGAGAAAAAAGTTAAGAATTTTGAGACAATGAGTGTAGCAGATAGACTATTTTCATACCTTTTTCCTCG
TTATAACGAAGCTATTTCCACGAGAAATATAACGCTTGAAGAACAAGAGCTTCTTAATAAATCTACGATAACTAATACAG
AAATTGAGGCTGAAGGAAGAAAGTTAAAAAACCTAAAAAATAAGATAGAAAAATATTATCCATCAGTAGAGACAAAATAA

Upstream 100 bases:

>100_bases
GATATCCTTTGATAACTATGAATAAGCAGATATATAAACAACTAATTTTCTAAATTAAATTTAAATTTTTATTGTTTATC
AAGTTTAAGTAATTTAAAGC

Downstream 100 bases:

>100_bases
AACTTTTTGTTTTGGTTAATCTAAATTTGAAAATAATTTCTTTCAAATTTAGATTAACTCAATCTTGTCCAAACTTTGCT
CAGTTAGCTATAAATCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTKHVFYLILDKCFILNFIGVLNMSINLNSSMCNSVYPVLDQPTLNQTTLNQPKEKVCEEVVLKITNCSHTPENKPCVIG
ENKLPVEDGVNFRSFNCPITLYPFTDPVVDECGHTFEREAIMEIYNRAIAEGTSFTCPLNPSKILDVSKLIKNYNLAGAK
EEVDEFTKKHTSEKKTSLELMKELMQEHTLERREYKTEMQKLISRHERFLEDFRPLARDTEESLNTSANILNQCSILKDK
NVILEKKVKNFETMSVADRLFSYLFPRYNEAISTRNITLEEQELLNKSTITNTEIEAEGRKLKNLKNKIEKYYPSVETK

Sequences:

>Translated_319_residues
MTKHVFYLILDKCFILNFIGVLNMSINLNSSMCNSVYPVLDQPTLNQTTLNQPKEKVCEEVVLKITNCSHTPENKPCVIG
ENKLPVEDGVNFRSFNCPITLYPFTDPVVDECGHTFEREAIMEIYNRAIAEGTSFTCPLNPSKILDVSKLIKNYNLAGAK
EEVDEFTKKHTSEKKTSLELMKELMQEHTLERREYKTEMQKLISRHERFLEDFRPLARDTEESLNTSANILNQCSILKDK
NVILEKKVKNFETMSVADRLFSYLFPRYNEAISTRNITLEEQELLNKSTITNTEIEAEGRKLKNLKNKIEKYYPSVETK
>Mature_318_residues
TKHVFYLILDKCFILNFIGVLNMSINLNSSMCNSVYPVLDQPTLNQTTLNQPKEKVCEEVVLKITNCSHTPENKPCVIGE
NKLPVEDGVNFRSFNCPITLYPFTDPVVDECGHTFEREAIMEIYNRAIAEGTSFTCPLNPSKILDVSKLIKNYNLAGAKE
EVDEFTKKHTSEKKTSLELMKELMQEHTLERREYKTEMQKLISRHERFLEDFRPLARDTEESLNTSANILNQCSILKDKN
VILEKKVKNFETMSVADRLFSYLFPRYNEAISTRNITLEEQELLNKSTITNTEIEAEGRKLKNLKNKIEKYYPSVETK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36913; Mature: 36782

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKHVFYLILDKCFILNFIGVLNMSINLNSSMCNSVYPVLDQPTLNQTTLNQPKEKVCEE
CCCHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHH
VVLKITNCSHTPENKPCVIGENKLPVEDGVNFRSFNCPITLYPFTDPVVDECGHTFEREA
HHHHHHCCCCCCCCCCEEECCCCCCHHCCCCEEEECCCEEEECCCCHHHHHHCCHHHHHH
IMEIYNRAIAEGTSFTCPLNPSKILDVSKLIKNYNLAGAKEEVDEFTKKHTSEKKTSLEL
HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MKELMQEHTLERREYKTEMQKLISRHERFLEDFRPLARDTEESLNTSANILNQCSILKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVILEKKVKNFETMSVADRLFSYLFPRYNEAISTRNITLEEQELLNKSTITNTEIEAEGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH
KLKNLKNKIEKYYPSVETK
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKHVFYLILDKCFILNFIGVLNMSINLNSSMCNSVYPVLDQPTLNQTTLNQPKEKVCEE
CCHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHH
VVLKITNCSHTPENKPCVIGENKLPVEDGVNFRSFNCPITLYPFTDPVVDECGHTFEREA
HHHHHHCCCCCCCCCCEEECCCCCCHHCCCCEEEECCCEEEECCCCHHHHHHCCHHHHHH
IMEIYNRAIAEGTSFTCPLNPSKILDVSKLIKNYNLAGAKEEVDEFTKKHTSEKKTSLEL
HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MKELMQEHTLERREYKTEMQKLISRHERFLEDFRPLARDTEESLNTSANILNQCSILKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVILEKKVKNFETMSVADRLFSYLFPRYNEAISTRNITLEEQELLNKSTITNTEIEAEGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH
KLKNLKNKIEKYYPSVETK
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA