Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447283

Identifier: 46447283

GI number: 46447283

Start: 1979980

End: 1981545

Strand: Reverse

Name: 46447283

Synonym: pc1649

Alternate gene names: NA

Gene position: 1981545-1979980 (Counterclockwise)

Preceding gene: 46447286

Following gene: 46447281

Centisome position: 82.07

GC content: 31.93

Gene sequence:

>1566_bases
GTGGTAATTTTGATTACTTATTATAATAATCCAATTTCTAAACATAATAGTCTCACTACCAATACAAATACCTGCTCTAG
CTATAAATCGAACAACTATTTAAAATTTTCTGAGCGTATTAATTTACTTTGTACAACAATTTTCCAATGTTTCCTCAACT
TATTCTTTAATTGTATCCCTAGAGATCAACTTCAATCTCAATGGAAAGAAGTTTTTTGGGGAAGAAAAGTAACTGTTAAT
CGCAAATTTATGGAACATCGCCTATCATCCGATCCAACTTCACTAAGTAAGATTGAAAATAAGCTTTTAAGAAATTCTTC
AGTTACCCTAGAAGAAATTGATGAATCAACAATCCCATCTTCTAATCTTTTACCTTTATCTCAAGAATTTAAATTGAGCT
TTCAAAACAACACTTTTCTAACTATTACAAGTTCCCAAAAGTCTTTATTAATGGAAAAATCGCCCTATTTTCAAGGTCTT
TGGTCAGGAAATTTTAAAGAAACTTTTCAACATCCTCTTGCTTTGACACAAAAAGAATTTACTCGTCTAATCAATTGCCT
ATTGGATGCTAACTTTAAAGTTCCTGTGGAAGACATTACTTCTTTCATTCAACTAGCTGATTATTATCAACTGACAGATG
TTGTAAAAAATTTAGAAAAACAGCTGCTTGATGCATACAAATCAGATAAATTTGAGCTATTTAATTCCAGCGAAGACAGA
CTAGTAGAATTAAAAGAATTTTTAGATTTTGCTGAGCGATTTCAATTAAATATTTTAAAAAATTATTTACAGCTTACAGT
GGTGAATTTATTGTTAAAGCAAACTCCTCATTTAAAGGAGTTTGAAAAAATTTTAAATTATTTTTCAAATGAGATAGAAG
GACTTAATTTTTCAGAAAATGCCTATTTAACTGACGCTCATCTTTTAGCATTAAAAAATTGTAAAAATTTAAAAGTGCTT
CAACTTCAGTCATGCCACCATCTCACTGACACAGGTCTAGCATGTTTGCCATCTTTAACAAATTTACAGTATTTAAATTT
GAACGGTTGTAAAAAACTTACTGACGCTGGATTAGCGCATTTAACACCCTTAGTGAATTTACAATATTTAGACCTGGGCT
TTTGCGATAAGCTCACTAGTAAAGGATTAGGGCATTTTAAATCCTTAATAGCTTTACAACATTTGAACTTGAGTGGGTGT
AAATTTATTAGGGACAACGGGTTAGCGCATTTAACACCCTTAGTGGCTTTACAATACTTGAACTTGAGCCAGTGCACTTT
TCTTACTGACGCAGGATTAGCACATTTGGTACCACTAGTAGCTTTAAAACATTTAGATCTAAGCTGGTGCAATAGCCTTA
CCAATGCTGGATTAGCACATTTAGTACACTTAGTGGCTTTACAATATTTAAATCTGAGCGGATGCATTTATCTTTCTGAA
GCTGGGCTAGCACATTTGGCGCCTTTAACTAGTTTACAGCATTTGAATTTGGAAGATTGCGAACATTTTACAAATGCTAG
ATTTAGATTAGCGCATTTTAAAGCTTTATTAGCCGCTACAAATTGA

Upstream 100 bases:

>100_bases
CCTTCGAATTTAATTTCTATCTTTTATTGCATTAATATTGCACTAATTTTATCTTATATAATATATTTTAAGGTTAAATA
CATTTATTTAAACAAGTGGG

Downstream 100 bases:

>100_bases
ATCTGAATTGAATCCAACTTACATTAATCTGGATTAGTTATGGCATCCGTAGTGGCTGTTCCACATTATTAAATCTTTTA
AAAAATAATTTTTCTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MVILITYYNNPISKHNSLTTNTNTCSSYKSNNYLKFSERINLLCTTIFQCFLNLFFNCIPRDQLQSQWKEVFWGRKVTVN
RKFMEHRLSSDPTSLSKIENKLLRNSSVTLEEIDESTIPSSNLLPLSQEFKLSFQNNTFLTITSSQKSLLMEKSPYFQGL
WSGNFKETFQHPLALTQKEFTRLINCLLDANFKVPVEDITSFIQLADYYQLTDVVKNLEKQLLDAYKSDKFELFNSSEDR
LVELKEFLDFAERFQLNILKNYLQLTVVNLLLKQTPHLKEFEKILNYFSNEIEGLNFSENAYLTDAHLLALKNCKNLKVL
QLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGC
KFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSE
AGLAHLAPLTSLQHLNLEDCEHFTNARFRLAHFKALLAATN

Sequences:

>Translated_521_residues
MVILITYYNNPISKHNSLTTNTNTCSSYKSNNYLKFSERINLLCTTIFQCFLNLFFNCIPRDQLQSQWKEVFWGRKVTVN
RKFMEHRLSSDPTSLSKIENKLLRNSSVTLEEIDESTIPSSNLLPLSQEFKLSFQNNTFLTITSSQKSLLMEKSPYFQGL
WSGNFKETFQHPLALTQKEFTRLINCLLDANFKVPVEDITSFIQLADYYQLTDVVKNLEKQLLDAYKSDKFELFNSSEDR
LVELKEFLDFAERFQLNILKNYLQLTVVNLLLKQTPHLKEFEKILNYFSNEIEGLNFSENAYLTDAHLLALKNCKNLKVL
QLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGC
KFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSE
AGLAHLAPLTSLQHLNLEDCEHFTNARFRLAHFKALLAATN
>Mature_521_residues
MVILITYYNNPISKHNSLTTNTNTCSSYKSNNYLKFSERINLLCTTIFQCFLNLFFNCIPRDQLQSQWKEVFWGRKVTVN
RKFMEHRLSSDPTSLSKIENKLLRNSSVTLEEIDESTIPSSNLLPLSQEFKLSFQNNTFLTITSSQKSLLMEKSPYFQGL
WSGNFKETFQHPLALTQKEFTRLINCLLDANFKVPVEDITSFIQLADYYQLTDVVKNLEKQLLDAYKSDKFELFNSSEDR
LVELKEFLDFAERFQLNILKNYLQLTVVNLLLKQTPHLKEFEKILNYFSNEIEGLNFSENAYLTDAHLLALKNCKNLKVL
QLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGC
KFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSE
AGLAHLAPLTSLQHLNLEDCEHFTNARFRLAHFKALLAATN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=191, Percent_Identity=36.1256544502618, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI161333852, Length=210, Percent_Identity=30.952380952381, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI284447308, Length=385, Percent_Identity=26.4935064935065, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI284447314, Length=348, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI6912466, Length=211, Percent_Identity=31.2796208530806, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI161333854, Length=210, Percent_Identity=30.952380952381, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI289666746, Length=323, Percent_Identity=28.1733746130031, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI27734755, Length=380, Percent_Identity=27.1052631578947, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI296531375, Length=203, Percent_Identity=30.0492610837438, Blast_Score=70, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI25151694, Length=194, Percent_Identity=32.9896907216495, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25151696, Length=194, Percent_Identity=32.9896907216495, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322549, Length=152, Percent_Identity=29.6052631578947, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17647819, Length=225, Percent_Identity=32, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24662818, Length=217, Percent_Identity=33.6405529953917, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21357913, Length=234, Percent_Identity=31.1965811965812, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59344; Mature: 59344

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILITYYNNPISKHNSLTTNTNTCSSYKSNNYLKFSERINLLCTTIFQCFLNLFFNCIP
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
RDQLQSQWKEVFWGRKVTVNRKFMEHRLSSDPTSLSKIENKLLRNSSVTLEEIDESTIPS
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCC
SNLLPLSQEFKLSFQNNTFLTITSSQKSLLMEKSPYFQGLWSGNFKETFQHPLALTQKEF
CCCCCCCHHHEEEECCCEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TRLINCLLDANFKVPVEDITSFIQLADYYQLTDVVKNLEKQLLDAYKSDKFELFNSSEDR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
LVELKEFLDFAERFQLNILKNYLQLTVVNLLLKQTPHLKEFEKILNYFSNEIEGLNFSEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
AYLTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAH
CEECHHHHHHHHCCCCCEEEEECCCCCHHHCCHHHHCCCCCEEEECCCCHHHHHHCCHHH
LTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCKFIRDNGLAHLTPLVALQYL
HHHHCEEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHC
NLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSE
CCCHHHEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
AGLAHLAPLTSLQHLNLEDCEHFTNARFRLAHFKALLAATN
CCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVILITYYNNPISKHNSLTTNTNTCSSYKSNNYLKFSERINLLCTTIFQCFLNLFFNCIP
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
RDQLQSQWKEVFWGRKVTVNRKFMEHRLSSDPTSLSKIENKLLRNSSVTLEEIDESTIPS
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCC
SNLLPLSQEFKLSFQNNTFLTITSSQKSLLMEKSPYFQGLWSGNFKETFQHPLALTQKEF
CCCCCCCHHHEEEECCCEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TRLINCLLDANFKVPVEDITSFIQLADYYQLTDVVKNLEKQLLDAYKSDKFELFNSSEDR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
LVELKEFLDFAERFQLNILKNYLQLTVVNLLLKQTPHLKEFEKILNYFSNEIEGLNFSEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
AYLTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAH
CEECHHHHHHHHCCCCCEEEEECCCCCHHHCCHHHHCCCCCEEEECCCCHHHHHHCCHHH
LTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCKFIRDNGLAHLTPLVALQYL
HHHHCEEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHC
NLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSE
CCCHHHEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
AGLAHLAPLTSLQHLNLEDCEHFTNARFRLAHFKALLAATN
CCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA