| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is traG [H]
Identifier: 46447074
GI number: 46447074
Start: 1711791
End: 1714574
Strand: Direct
Name: traG [H]
Synonym: pc1440
Alternate gene names: 46447074
Gene position: 1711791-1714574 (Clockwise)
Preceding gene: 46447073
Following gene: 46447075
Centisome position: 70.9
GC content: 42.21
Gene sequence:
>2784_bases ATGATCCCCCTATTTTTAGCGTCTGATTTAACGATTCATACTTATGGAGGAGGAGAAATTCTTCAAAAGGTTTTTGTCGC CATTGCCATGTTATCTGGGGAAGGGGGGATGGTTTTTCCTTTGATGTTTCTTTGTGCTGCTTTAGGGTTTGGTTTTATGG TTTGCCAACTTTTAGTCACTTTGTCATTTGATCGCTTTTTTACGCATTATTTTGTTCCTTTTCTCGTCATCTATACAGCT TTTATCATTCCGAAAACGACTATCCACATCGAAGATGCATTACATAAACCCAAAATTTACAAAGTCGACCATGTTCCTCG CTTGCTCGCTCACTTTGCCGAAATCGCTAGTTCAATTGGCTATTATGCAACATGTGGCGTGGAAAAAGCGATGCATACTG TCGATGATGTCAAATATAGTCAGACAGGATTAATTTTTGGCTCCGACACTGCCTTGGATTATCGACGCTTTCAATTGACC AACCCCGATTTGCAAAAAGATTTTAAAGAATTTTCTAAACAATGTGTGCTTTACGATTTGGCACTTGGGCGCTACTCCCT CAAAGAATTAAAAACCTCTACTGATCTTTGGAAATTTTTAAAAGAACGAACTTCAACGCTTGGAATGATTTATTATTGTC CGCCAACAGCCAAAGGGGGAACAAAAAAAGAGGCCTGTGAATACCTGACCTGCAGGCAAGCTTTAGAGAAATTTGAACCT CTATTTAGCAAAGAAAAGGCTTATTATGCGAAGCAAGAAATTGGGAAAAATTTGCCTTTGACTTTTCAGGCTTTAACCCA CATCAAGCAAGATAGCCAAACTTTAATTAGTCAACAGCTCATGATGCATGTGCTAGCAGATTCATTTAGCCCTGAGAAAT TTGCGCAAGAAAGAGCACATCTTCAGCAAAACTCCACCTATCAAGCTGCCGGTTTTACCGCTGCAAAAGGAATTGTGTAC ATGCGAGTGCTTTTTGAAGCCTTGATTTATACCTCCTTTCTTTTTGTGCTTCCTTTATCTTTACTTCCAAGCGGAATTAA AATACTCATGAATTGGGCGTGGTCAGTTGTCTGGATTCAGTTTTGGCCACCTTTTTATGCCATTTTGAATTATTTGGCTT CGATTGTGGCAAAACATACCACAGCTGGCATCGCAGATGGTTTGGCGGAAAAAGGGCTTAGCATTTTTACAAGTGTCGGA ATTGAAAACTTTGCCAATGACACATTTGCCTTAGCGGGATACTTAACGCTGAGCGTTCCTTTTCTTAGTTATGTGCTTTT ACAGGGAGGATTGAGTCAATTTGTTCAACTTGCCGGTACGCTTACCTCCCCTGCGCAAAGTGCTGCCTCTGCAGCGGCTG GAGAACAAATCTCTGGCAATTACTCTTATGACAATATCAGCATGGGCCAAACCTCCTATGGGAATACCACAGCTTTTCAA AATCAGTTAGCGCCCTCTGTTTCCGATGGATATTTCATAGAAAATAATGGATCCGAAAGGATGGATTATACCTCTAGTGG GGTCATTTATACGCAAAATGCTTCGAACCTAACCAGTAGTATTAACGCCGATCAAGTTTTCGGGGAAAGTCTCCAACATC AAAAGCAACATGCGACCTCTTATGCAGAAACGACGAGTCAGCAATACCAAGAGAGCCTATCTGCAGCTACCAATGTGGGA TCCAATTTAGTCAGTCACTTGGCCCATGCGGATCAATTCAATGAAGGATTCTCTTCACGAGAAGCTTATGATGCGCAGCA ATCTGTGAGACATATGGAATCGGCAGCCGATAACTGGGGACGCCAATATGGCCTTAGCTCCAAACAAAGTATGGATTTTG CCATGGCCGGTGCCATTGGAGGGGAACTGGGAGTTAATCAACTTCTTAATTCAATTACCGGGGTGGGATTAAGTGCCAGC GGCAGAGGGACAGCGGGCTATAATTTTGGGGCTGATGAGAGTAAATTTGTCAGCGCTGCGACGAATTTTGCACAAAGTGA AGAATTTCAAAGCAACTTCCTAAAAGTCAAAGATTACGCTATGACACAAGCCTCCTCCTCCTCGATGGATGAAGGCGTTC GCTTGGCGCAAGACTTTACGCAATCGTTAAGTGAAGTGCAAAACTCGCAAGAATCTTACCAAATTGCCCAGACTCAGCTT GACCAAATCTCTGAGACAGGAGCTTGGTATCAACAAAACTCCCATTTAATCAAAGACAATCTCAATCAAAAATATGTGGA TTGGGCTGTTGAGCGCTTGAATGATCAGTACCAAGATGGAACCGGGTTTGAGCGTTTCAAAGCGATCGCAAATGGGAATA CCCTTGAGAATATCAATCAATCCCAAGCCCTTGTGTATGAATTTGTGCAAACGGAAATGAATAAGCAAGCAGGAATTGCT CATCAAATCCCGGCGGATATAGATCCTCAATCTTCTTATATGAAAGCTCAAGTGCCGCAAGTCCATCGAGAAGAAAAATT AAACGAAATTTTTGAGGACTATACGCAGCAAGCGCAAGGAATTCAACAAGTGTATGGATCTCAGCCAAAAACGCGAGAGG GCCTTGAACAAGCCTATGAGCAAGCAAAAGGAACGCATGATGCTTATTCTTACTTTACCGATCATGGCATTCAGTATCAG CGCAATGCCACAGAAAATCGCTTTGATATAGAAAGACAAAAAACTCTTCCCAAACGTGCCTGGAAATCAACGGAAGCCCA AACGGAAACCTCGCAAGATTACAAATTAGATGTTCCATTTTTTTGGAAACGAGGAGAGTCATGA
Upstream 100 bases:
>100_bases CATTATCAACGCTTAGAAGCGGAAAATCAGCTTATGCTCAAAATAGAGACACTGGAACAAAAAATTGCTTCGCAGATTAT TCTTTTTTAGGAAACCAAAT
Downstream 100 bases:
>100_bases AGCTATTTCAAACTATCACCGAAGGAGGTCAATTAACCACGCACAGTGTGCGTATGTTCAAGCAGGTTACGAAAACCTCT TTTTTTATTACCTTTGTCTT
Product: putative conjugative transfer protein traG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 927; Mature: 927
Protein sequence:
>927_residues MIPLFLASDLTIHTYGGGEILQKVFVAIAMLSGEGGMVFPLMFLCAALGFGFMVCQLLVTLSFDRFFTHYFVPFLVIYTA FIIPKTTIHIEDALHKPKIYKVDHVPRLLAHFAEIASSIGYYATCGVEKAMHTVDDVKYSQTGLIFGSDTALDYRRFQLT NPDLQKDFKEFSKQCVLYDLALGRYSLKELKTSTDLWKFLKERTSTLGMIYYCPPTAKGGTKKEACEYLTCRQALEKFEP LFSKEKAYYAKQEIGKNLPLTFQALTHIKQDSQTLISQQLMMHVLADSFSPEKFAQERAHLQQNSTYQAAGFTAAKGIVY MRVLFEALIYTSFLFVLPLSLLPSGIKILMNWAWSVVWIQFWPPFYAILNYLASIVAKHTTAGIADGLAEKGLSIFTSVG IENFANDTFALAGYLTLSVPFLSYVLLQGGLSQFVQLAGTLTSPAQSAASAAAGEQISGNYSYDNISMGQTSYGNTTAFQ NQLAPSVSDGYFIENNGSERMDYTSSGVIYTQNASNLTSSINADQVFGESLQHQKQHATSYAETTSQQYQESLSAATNVG SNLVSHLAHADQFNEGFSSREAYDAQQSVRHMESAADNWGRQYGLSSKQSMDFAMAGAIGGELGVNQLLNSITGVGLSAS GRGTAGYNFGADESKFVSAATNFAQSEEFQSNFLKVKDYAMTQASSSSMDEGVRLAQDFTQSLSEVQNSQESYQIAQTQL DQISETGAWYQQNSHLIKDNLNQKYVDWAVERLNDQYQDGTGFERFKAIANGNTLENINQSQALVYEFVQTEMNKQAGIA HQIPADIDPQSSYMKAQVPQVHREEKLNEIFEDYTQQAQGIQQVYGSQPKTREGLEQAYEQAKGTHDAYSYFTDHGIQYQ RNATENRFDIERQKTLPKRAWKSTEAQTETSQDYKLDVPFFWKRGES
Sequences:
>Translated_927_residues MIPLFLASDLTIHTYGGGEILQKVFVAIAMLSGEGGMVFPLMFLCAALGFGFMVCQLLVTLSFDRFFTHYFVPFLVIYTA FIIPKTTIHIEDALHKPKIYKVDHVPRLLAHFAEIASSIGYYATCGVEKAMHTVDDVKYSQTGLIFGSDTALDYRRFQLT NPDLQKDFKEFSKQCVLYDLALGRYSLKELKTSTDLWKFLKERTSTLGMIYYCPPTAKGGTKKEACEYLTCRQALEKFEP LFSKEKAYYAKQEIGKNLPLTFQALTHIKQDSQTLISQQLMMHVLADSFSPEKFAQERAHLQQNSTYQAAGFTAAKGIVY MRVLFEALIYTSFLFVLPLSLLPSGIKILMNWAWSVVWIQFWPPFYAILNYLASIVAKHTTAGIADGLAEKGLSIFTSVG IENFANDTFALAGYLTLSVPFLSYVLLQGGLSQFVQLAGTLTSPAQSAASAAAGEQISGNYSYDNISMGQTSYGNTTAFQ NQLAPSVSDGYFIENNGSERMDYTSSGVIYTQNASNLTSSINADQVFGESLQHQKQHATSYAETTSQQYQESLSAATNVG SNLVSHLAHADQFNEGFSSREAYDAQQSVRHMESAADNWGRQYGLSSKQSMDFAMAGAIGGELGVNQLLNSITGVGLSAS GRGTAGYNFGADESKFVSAATNFAQSEEFQSNFLKVKDYAMTQASSSSMDEGVRLAQDFTQSLSEVQNSQESYQIAQTQL DQISETGAWYQQNSHLIKDNLNQKYVDWAVERLNDQYQDGTGFERFKAIANGNTLENINQSQALVYEFVQTEMNKQAGIA HQIPADIDPQSSYMKAQVPQVHREEKLNEIFEDYTQQAQGIQQVYGSQPKTREGLEQAYEQAKGTHDAYSYFTDHGIQYQ RNATENRFDIERQKTLPKRAWKSTEAQTETSQDYKLDVPFFWKRGES >Mature_927_residues MIPLFLASDLTIHTYGGGEILQKVFVAIAMLSGEGGMVFPLMFLCAALGFGFMVCQLLVTLSFDRFFTHYFVPFLVIYTA FIIPKTTIHIEDALHKPKIYKVDHVPRLLAHFAEIASSIGYYATCGVEKAMHTVDDVKYSQTGLIFGSDTALDYRRFQLT NPDLQKDFKEFSKQCVLYDLALGRYSLKELKTSTDLWKFLKERTSTLGMIYYCPPTAKGGTKKEACEYLTCRQALEKFEP LFSKEKAYYAKQEIGKNLPLTFQALTHIKQDSQTLISQQLMMHVLADSFSPEKFAQERAHLQQNSTYQAAGFTAAKGIVY MRVLFEALIYTSFLFVLPLSLLPSGIKILMNWAWSVVWIQFWPPFYAILNYLASIVAKHTTAGIADGLAEKGLSIFTSVG IENFANDTFALAGYLTLSVPFLSYVLLQGGLSQFVQLAGTLTSPAQSAASAAAGEQISGNYSYDNISMGQTSYGNTTAFQ NQLAPSVSDGYFIENNGSERMDYTSSGVIYTQNASNLTSSINADQVFGESLQHQKQHATSYAETTSQQYQESLSAATNVG SNLVSHLAHADQFNEGFSSREAYDAQQSVRHMESAADNWGRQYGLSSKQSMDFAMAGAIGGELGVNQLLNSITGVGLSAS GRGTAGYNFGADESKFVSAATNFAQSEEFQSNFLKVKDYAMTQASSSSMDEGVRLAQDFTQSLSEVQNSQESYQIAQTQL DQISETGAWYQQNSHLIKDNLNQKYVDWAVERLNDQYQDGTGFERFKAIANGNTLENINQSQALVYEFVQTEMNKQAGIA HQIPADIDPQSSYMKAQVPQVHREEKLNEIFEDYTQQAQGIQQVYGSQPKTREGLEQAYEQAKGTHDAYSYFTDHGIQYQ RNATENRFDIERQKTLPKRAWKSTEAQTETSQDYKLDVPFFWKRGES
Specific function: Plays a crucial role in donor-recipient cell interactions. Required for two stages of the conjugation process:pilus biosynthesis and mating aggregate stabilization. May interact with traN [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012931 [H]
Pfam domain/function: PF07916 TraG_N [H]
EC number: NA
Molecular weight: Translated: 103419; Mature: 103419
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLFLASDLTIHTYGGGEILQKVFVAIAMLSGEGGMVFPLMFLCAALGFGFMVCQLLVT CCCEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSFDRFFTHYFVPFLVIYTAFIIPKTTIHIEDALHKPKIYKVDHVPRLLAHFAEIASSIG HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCC YYATCGVEKAMHTVDDVKYSQTGLIFGSDTALDYRRFQLTNPDLQKDFKEFSKQCVLYDL CEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHEECCCCHHHHHHHHHHHHHHHHHH ALGRYSLKELKTSTDLWKFLKERTSTLGMIYYCPPTAKGGTKKEACEYLTCRQALEKFEP HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LFSKEKAYYAKQEIGKNLPLTFQALTHIKQDSQTLISQQLMMHVLADSFSPEKFAQERAH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQQNSTYQAAGFTAAKGIVYMRVLFEALIYTSFLFVLPLSLLPSGIKILMNWAWSVVWIQ HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEE FWPPFYAILNYLASIVAKHTTAGIADGLAEKGLSIFTSVGIENFANDTFALAGYLTLSVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FLSYVLLQGGLSQFVQLAGTLTSPAQSAASAAAGEQISGNYSYDNISMGQTSYGNTTAFQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH NQLAPSVSDGYFIENNGSERMDYTSSGVIYTQNASNLTSSINADQVFGESLQHQKQHATS HHCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHH YAETTSQQYQESLSAATNVGSNLVSHLAHADQFNEGFSSREAYDAQQSVRHMESAADNWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RQYGLSSKQSMDFAMAGAIGGELGVNQLLNSITGVGLSASGRGTAGYNFGADESKFVSAA HHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH TNFAQSEEFQSNFLKVKDYAMTQASSSSMDEGVRLAQDFTQSLSEVQNSQESYQIAQTQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQISETGAWYQQNSHLIKDNLNQKYVDWAVERLNDQYQDGTGFERFKAIANGNTLENINQ HHHHHCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCH SQALVYEFVQTEMNKQAGIAHQIPADIDPQSSYMKAQVPQVHREEKLNEIFEDYTQQAQG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH IQQVYGSQPKTREGLEQAYEQAKGTHDAYSYFTDHGIQYQRNATENRFDIERQKTLPKRA HHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCHHHH WKSTEAQTETSQDYKLDVPFFWKRGES HCCCCCCCCCCCCCEECCCHHCCCCCC >Mature Secondary Structure MIPLFLASDLTIHTYGGGEILQKVFVAIAMLSGEGGMVFPLMFLCAALGFGFMVCQLLVT CCCEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSFDRFFTHYFVPFLVIYTAFIIPKTTIHIEDALHKPKIYKVDHVPRLLAHFAEIASSIG HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCC YYATCGVEKAMHTVDDVKYSQTGLIFGSDTALDYRRFQLTNPDLQKDFKEFSKQCVLYDL CEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHEECCCCHHHHHHHHHHHHHHHHHH ALGRYSLKELKTSTDLWKFLKERTSTLGMIYYCPPTAKGGTKKEACEYLTCRQALEKFEP HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LFSKEKAYYAKQEIGKNLPLTFQALTHIKQDSQTLISQQLMMHVLADSFSPEKFAQERAH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQQNSTYQAAGFTAAKGIVYMRVLFEALIYTSFLFVLPLSLLPSGIKILMNWAWSVVWIQ HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEE FWPPFYAILNYLASIVAKHTTAGIADGLAEKGLSIFTSVGIENFANDTFALAGYLTLSVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FLSYVLLQGGLSQFVQLAGTLTSPAQSAASAAAGEQISGNYSYDNISMGQTSYGNTTAFQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH NQLAPSVSDGYFIENNGSERMDYTSSGVIYTQNASNLTSSINADQVFGESLQHQKQHATS HHCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHH YAETTSQQYQESLSAATNVGSNLVSHLAHADQFNEGFSSREAYDAQQSVRHMESAADNWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RQYGLSSKQSMDFAMAGAIGGELGVNQLLNSITGVGLSASGRGTAGYNFGADESKFVSAA HHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH TNFAQSEEFQSNFLKVKDYAMTQASSSSMDEGVRLAQDFTQSLSEVQNSQESYQIAQTQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQISETGAWYQQNSHLIKDNLNQKYVDWAVERLNDQYQDGTGFERFKAIANGNTLENINQ HHHHHCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCH SQALVYEFVQTEMNKQAGIAHQIPADIDPQSSYMKAQVPQVHREEKLNEIFEDYTQQAQG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH IQQVYGSQPKTREGLEQAYEQAKGTHDAYSYFTDHGIQYQRNATENRFDIERQKTLPKRA HHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCHHHH WKSTEAQTETSQDYKLDVPFFWKRGES HCCCCCCCCCCCCCEECCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1348105; 7915817 [H]