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The map label for this gene is traH [H]

Identifier: 46447073

GI number: 46447073

Start: 1710422

End: 1711780

Strand: Direct

Name: traH [H]

Synonym: pc1439

Alternate gene names: 46447073

Gene position: 1710422-1711780 (Clockwise)

Preceding gene: 46447072

Following gene: 46447074

Centisome position: 70.84

GC content: 42.16

Gene sequence:

>1359_bases
ATGAAACCTCTTCTTTTTTTTATCCTCCTTTCCTTCTCTTTAACTTTAAGAGCTGATTTGCATAACGATCTCAAAAGTTA
TTTGAGTGAGCTCAATACCTATTCACACGTCGATAAAAATGAAATTTACCATTCGCAACGAGCAGGTTACATGACAGGAG
GAGGCATCAGCATACGAAATGGAGCTTCTCATACCGCCTTGGCTCAGGTCAGTCTACCTAAATTTGATGCTGGTTGCGGA
GGGATTGATATTTTCACGGGCGGGATCAGTTTTATTAGTCATGATCAATTGATTGCTGCCCTCAAAAATATTGCGAGCTC
TGCGCAAGGGTATGCGTTTATGTTGGGGATTGAGACTGTCTCTCCCCTGATTGCTAGCACGATGAAACAAATGGAAACGT
GGGCCAATGCGATTAATTCCTTGGGAATCAATAGCTGCGAAGTCGCAACGGGCCTTGTAGGATCGGTTTGGCCTGCACGA
ACTGCAGCTAAGCAGCAAATTTGTCGTTCAGCAAAAAATGGGGGCTTTGCCTCTAGTTTTATTAACGCTCGTCACCAATG
TGCGGATGAAGGAGACTATGCCAAGACGATGCAATCGATGGCTAAAGATCCTCTATACGATGGGATGTTGTTAGAAGAGT
ATAATCTAACCTGGAAAGCCGTTCAAAAACACCCTTTTCTTGCCAAAAAAGAAAATCGAAAAATGGCTGAGGAAATCATG
AGTTTGACAGGAACCTTGATCATTCGAAGAGATAAATCCCTTGTCGTTGAACCTTGGCCCTCCCGTATTTACGATGATTC
CTTTTTACCCATTCTTTTAGAGGGAGGGACAACACGGGTGTATCAATGCACGGGTGGCAACGCTAAACAAAACTGCCTTG
CTTTGGAGATGAAAGAGTTGACGATTCCGGCTGAACAAGCGTGGAAGGGGCGAATTAAACAGGCCTTAGCGACCATTCAA
CAAAAAATTTTAGCAGATACTCCCCTGGCAAGCGAAGAAATTGATCTTTTATCGAAATCACGGCTTCCCCTTTTTAAGAT
TGTTAATGTTTTAACCGCCTATAAACGAGAAGTTAGCCCCATCAGTTTATACGAGGTTGCGGAAATTGTCGGTAATGAAA
TGCTCATTCAATACTTAAGAGAAATCATTGGAACGGTTCGTTTAGCTGCTATTCAGCTTGAACGCGGGCAAATGTATGAT
TTTGATAGTCAAAAGTTTATTGAGGAGTTAGAGCGTGTAGAAAAAGTTGTTTCCCGCTATGAGGAACGTCATTATCAACG
CTTAGAAGCGGAAAATCAGCTTATGCTCAAAATAGAGACACTGGAACAAAAAATTGCTTCGCAGATTATTCTTTTTTAG

Upstream 100 bases:

>100_bases
AACAACAAAAAATGGTGCCTATTGCTTTTGGTCTCTCCTCCCTTGATCAAATTGAAGAAAATATTATTCTACAATTGCCC
CCTCATCCTAGGAATCATCC

Downstream 100 bases:

>100_bases
GAAACCAAATATGATCCCCCTATTTTTAGCGTCTGATTTAACGATTCATACTTATGGAGGAGGAGAAATTCTTCAAAAGG
TTTTTGTCGCCATTGCCATG

Product: putative F pilus assembly protein traH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MKPLLFFILLSFSLTLRADLHNDLKSYLSELNTYSHVDKNEIYHSQRAGYMTGGGISIRNGASHTALAQVSLPKFDAGCG
GIDIFTGGISFISHDQLIAALKNIASSAQGYAFMLGIETVSPLIASTMKQMETWANAINSLGINSCEVATGLVGSVWPAR
TAAKQQICRSAKNGGFASSFINARHQCADEGDYAKTMQSMAKDPLYDGMLLEEYNLTWKAVQKHPFLAKKENRKMAEEIM
SLTGTLIIRRDKSLVVEPWPSRIYDDSFLPILLEGGTTRVYQCTGGNAKQNCLALEMKELTIPAEQAWKGRIKQALATIQ
QKILADTPLASEEIDLLSKSRLPLFKIVNVLTAYKREVSPISLYEVAEIVGNEMLIQYLREIIGTVRLAAIQLERGQMYD
FDSQKFIEELERVEKVVSRYEERHYQRLEAENQLMLKIETLEQKIASQIILF

Sequences:

>Translated_452_residues
MKPLLFFILLSFSLTLRADLHNDLKSYLSELNTYSHVDKNEIYHSQRAGYMTGGGISIRNGASHTALAQVSLPKFDAGCG
GIDIFTGGISFISHDQLIAALKNIASSAQGYAFMLGIETVSPLIASTMKQMETWANAINSLGINSCEVATGLVGSVWPAR
TAAKQQICRSAKNGGFASSFINARHQCADEGDYAKTMQSMAKDPLYDGMLLEEYNLTWKAVQKHPFLAKKENRKMAEEIM
SLTGTLIIRRDKSLVVEPWPSRIYDDSFLPILLEGGTTRVYQCTGGNAKQNCLALEMKELTIPAEQAWKGRIKQALATIQ
QKILADTPLASEEIDLLSKSRLPLFKIVNVLTAYKREVSPISLYEVAEIVGNEMLIQYLREIIGTVRLAAIQLERGQMYD
FDSQKFIEELERVEKVVSRYEERHYQRLEAENQLMLKIETLEQKIASQIILF
>Mature_452_residues
MKPLLFFILLSFSLTLRADLHNDLKSYLSELNTYSHVDKNEIYHSQRAGYMTGGGISIRNGASHTALAQVSLPKFDAGCG
GIDIFTGGISFISHDQLIAALKNIASSAQGYAFMLGIETVSPLIASTMKQMETWANAINSLGINSCEVATGLVGSVWPAR
TAAKQQICRSAKNGGFASSFINARHQCADEGDYAKTMQSMAKDPLYDGMLLEEYNLTWKAVQKHPFLAKKENRKMAEEIM
SLTGTLIIRRDKSLVVEPWPSRIYDDSFLPILLEGGTTRVYQCTGGNAKQNCLALEMKELTIPAEQAWKGRIKQALATIQ
QKILADTPLASEEIDLLSKSRLPLFKIVNVLTAYKREVSPISLYEVAEIVGNEMLIQYLREIIGTVRLAAIQLERGQMYD
FDSQKFIEELERVEKVVSRYEERHYQRLEAENQLMLKIETLEQKIASQIILF

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 50566; Mature: 50566

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLFFILLSFSLTLRADLHNDLKSYLSELNTYSHVDKNEIYHSQRAGYMTGGGISIRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCEEECC
GASHTALAQVSLPKFDAGCGGIDIFTGGISFISHDQLIAALKNIASSAQGYAFMLGIETV
CCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
SPLIASTMKQMETWANAINSLGINSCEVATGLVGSVWPARTAAKQQICRSAKNGGFASSF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
INARHQCADEGDYAKTMQSMAKDPLYDGMLLEEYNLTWKAVQKHPFLAKKENRKMAEEIM
HHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHH
SLTGTLIIRRDKSLVVEPWPSRIYDDSFLPILLEGGTTRVYQCTGGNAKQNCLALEMKEL
HHHHHEEEEECCCEEECCCCCHHCCCCCCEEEEECCCEEEEEECCCCCCCHHHEEEHHHH
TIPAEQAWKGRIKQALATIQQKILADTPLASEEIDLLSKSRLPLFKIVNVLTAYKREVSP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
ISLYEVAEIVGNEMLIQYLREIIGTVRLAAIQLERGQMYDFDSQKFIEELERVEKVVSRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
EERHYQRLEAENQLMLKIETLEQKIASQIILF
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPLLFFILLSFSLTLRADLHNDLKSYLSELNTYSHVDKNEIYHSQRAGYMTGGGISIRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCEEECC
GASHTALAQVSLPKFDAGCGGIDIFTGGISFISHDQLIAALKNIASSAQGYAFMLGIETV
CCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
SPLIASTMKQMETWANAINSLGINSCEVATGLVGSVWPARTAAKQQICRSAKNGGFASSF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
INARHQCADEGDYAKTMQSMAKDPLYDGMLLEEYNLTWKAVQKHPFLAKKENRKMAEEIM
HHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHH
SLTGTLIIRRDKSLVVEPWPSRIYDDSFLPILLEGGTTRVYQCTGGNAKQNCLALEMKEL
HHHHHEEEEECCCEEECCCCCHHCCCCCCEEEEECCCEEEEEECCCCCCCHHHEEEHHHH
TIPAEQAWKGRIKQALATIQQKILADTPLASEEIDLLSKSRLPLFKIVNVLTAYKREVSP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
ISLYEVAEIVGNEMLIQYLREIIGTVRLAAIQLERGQMYDFDSQKFIEELERVEKVVSRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
EERHYQRLEAENQLMLKIETLEQKIASQIILF
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]