Click here to switch to the map view.

The map label for this gene is traW [H]

Identifier: 46447066

GI number: 46447066

Start: 1705741

End: 1706373

Strand: Direct

Name: traW [H]

Synonym: pc1432

Alternate gene names: 46447066

Gene position: 1705741-1706373 (Clockwise)

Preceding gene: 46447065

Following gene: 46447067

Centisome position: 70.65

GC content: 40.6

Gene sequence:

>633_bases
ATGCCCCCTTTTCTAACAGGAATCTTGACAGTTTTGCTTATCTTTTCTTCATTAGAAGCCAAAAATTTAGGAATTTATGG
AGCAACTGCTTCAATTGAGGAAGAAGATCTCCTCATTTTCATGCAAAAAAATATGCAATTGATCACGGAAGCTGACCATG
AAAAGTGGATGCAAAATTTACAGAGTCATTTGCTTGCTCAGATGAAAAAACCTTTTGTCATCAAGGGAATTGGAAAAACC
CAAACGTACACGGTGAGCTATTTTGATCCGAGCATTACGGTAGATCGAGATATCCTCAATCATTCTCAGCAAATCGTGGT
GAAAAAAGGAACGCGGATCAATCCTCTGTCTTTAGTAATGCTGGATCAAGATTTATTATTCGTTGATGCCACAGATACAG
AGCAATTGGCTTGGGCGCAGGCACTTTATCCTTCTGGAAAGTGGATTCTGGTTAAAGGACAACCCATGCAACTCGAAGAA
GAGCTCCAACGTCCCATCTATTTTGACCAAGGAGGAGTCCTTCTTAAAAAATTTGGCATCCAAAGTGTTCCAGCACGCGT
CTCCCAAGAAGGGTTGCGACTCAAAATAGAATTAATTCCGATTGGAGAGAGTTCATGCGTGCCTATTTCTTAA

Upstream 100 bases:

>100_bases
CACAAGGATTTTTCTTTGTCCATGCGACACATCCTCAAAGTTTTGATTCTCGTTATGCTGAATTTGGCCTTGTTTCCAAA
GAGCAGTTAAAGGAGCGTTT

Downstream 100 bases:

>100_bases
GGGTGATTTTGTTGCTGAATGGAGGACTATGGGGAGAAGAAATGCAACATTTTGCTTTAGACTCCAATTGGCTTAAGCAA
GCGCAACAAGTCGATGAAAA

Product: putative F pilus assembly protein traW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MPPFLTGILTVLLIFSSLEAKNLGIYGATASIEEEDLLIFMQKNMQLITEADHEKWMQNLQSHLLAQMKKPFVIKGIGKT
QTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQDLLFVDATDTEQLAWAQALYPSGKWILVKGQPMQLEE
ELQRPIYFDQGGVLLKKFGIQSVPARVSQEGLRLKIELIPIGESSCVPIS

Sequences:

>Translated_210_residues
MPPFLTGILTVLLIFSSLEAKNLGIYGATASIEEEDLLIFMQKNMQLITEADHEKWMQNLQSHLLAQMKKPFVIKGIGKT
QTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQDLLFVDATDTEQLAWAQALYPSGKWILVKGQPMQLEE
ELQRPIYFDQGGVLLKKFGIQSVPARVSQEGLRLKIELIPIGESSCVPIS
>Mature_209_residues
PPFLTGILTVLLIFSSLEAKNLGIYGATASIEEEDLLIFMQKNMQLITEADHEKWMQNLQSHLLAQMKKPFVIKGIGKTQ
TYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQDLLFVDATDTEQLAWAQALYPSGKWILVKGQPMQLEEE
LQRPIYFDQGGVLLKKFGIQSVPARVSQEGLRLKIELIPIGESSCVPIS

Specific function: Involved in F-pilus assembly. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014114 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23616; Mature: 23485

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPFLTGILTVLLIFSSLEAKNLGIYGATASIEEEDLLIFMQKNMQLITEADHEKWMQNL
CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCHHHHHHHHH
QSHLLAQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVM
HHHHHHHHCCCEEEEECCCCEEEEEEEECCCCEECHHHHCCCCEEEEECCCCCCCEEEEE
LDQDLLFVDATDTEQLAWAQALYPSGKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGI
ECCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCEEECCCCEEEECCCC
QSVPARVSQEGLRLKIELIPIGESSCVPIS
CCCCHHHCCCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
PPFLTGILTVLLIFSSLEAKNLGIYGATASIEEEDLLIFMQKNMQLITEADHEKWMQNL
CHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCHHHHHHHHH
QSHLLAQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVM
HHHHHHHHCCCEEEEECCCCEEEEEEEECCCCEECHHHHCCCCEEEEECCCCCCCEEEEE
LDQDLLFVDATDTEQLAWAQALYPSGKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGI
ECCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCEEECCCCEEEECCCC
QSVPARVSQEGLRLKIELIPIGESSCVPIS
CCCCHHHCCCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1355084; 7915817; 2198250 [H]