Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is ackA
Identifier: 46446996
GI number: 46446996
Start: 1628686
End: 1629873
Strand: Reverse
Name: ackA
Synonym: pc1362
Alternate gene names: 46446996
Gene position: 1629873-1628686 (Counterclockwise)
Preceding gene: 46446998
Following gene: 46446991
Centisome position: 67.5
GC content: 35.77
Gene sequence:
>1188_bases ATGCCGAAGGTACTGGTGATGAATGCAGGTTCAAGCTCGCATAAACTTTCGCTTTTTAGTGATAAAATTGAGAATGCCGG ATCAGCTTTATGGAAAGCTCATATAGAATGGGGAAAAAAAAATCCTAGTTATACTTTGAAAAACGGAAGCCAAGAGTCCA ATCCCATTTATTTGCAAACAACTTCAGTTAAACAAGGGATCCAAGAAGTGATAGAAAAGTTGTGGATAGGAGATTTTGCT GTCATTAAAGAAGTGCATGAGATTGAATGGATTGGGCATCGCGTTGTTCATGGAGGTTCTTTATTCCATCAGCCTGTTTT GATCAATGCATCGGTAAAAAAAGACATTAGCAATTTAAGTTCTTTAGCCCCTTTACATAATCCTATCAATTTAGAGGGGA TTGAATTATTAGAAAAAATATTTCCCTCGATTCCTCATTTTGCCGTTTTTGATACTGCTTTTCACCGGACAATGCGTGAA GAGATTAAAACCTATCCTATTCCTTATGAATGGAAGGAAAAGGGGATTGAACGTTATGGTTTTCATGGAATAAGTCATTC TTACTGTGCAAAACAAATAAAAAAATGGATAAAGCCTCAAGAAACTCCTTTTAAGCTTATTAATTGTCATTTAGGAAATG GAGCATCTCTTTGTGCGATACGAGATGGGTTCAGCATAGATACAACCATGGGATTTACTCCGATGGAAGGTTTGATGATG GGGACTCGATCAGGTTCTATTGATCCCGGCATTTTGATTTACTGTTTGAGAAATAAAAATCTTTCCTTAGAAGAACTCGA TCATCTTTTAAATTTTGAATCGGGATTAAAAGGAATTGGAGGAACTTCTGATATGAGAGAGATTCATGCTTTTAAAAATA AGCAGTCACAGCTGGCTCTAGATATGTATATTTATCGTTTAAAAACTGGAATAGGAGCTATGACAGCTTCTCTTGGAGGA ATTGATGCTTTGTGTTTTACAGGTGGAATTGGAGAAAATGATAGTTATCTTCGAAAAAAAACTTGTGAAGAATTAGCTTA TCTTGGCATTCAACTGGATTTGCAAAAAAATCAAGGGGGGAATCAGGATAAAGAAATTAGTTTGCATGATTCACCTGTCA AAGTTTTCGTCATTCATACACAAGAAGAATGGATGATTGCTAAATCTTGCTTAGAGTATTTGACTTGA
Upstream 100 bases:
>100_bases GAATAGATGAAAAAAGAATGCCAAAACAGCCTCTTTACAAAAATAAATTTCCTGATAGCTTGAATTTAGAGTTTTATTTT TTCCAAATTTAGGAGTCAGC
Downstream 100 bases:
>100_bases GGTTAAAAATTCAGAAATTGAGCGTTGAATAAGTTCTCGATTCACCCTAGCAACATCTTGAAGAAATGTAAGACGATTGA TTTGAAGAGAAATTTTTTGA
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MPKVLVMNAGSSSHKLSLFSDKIENAGSALWKAHIEWGKKNPSYTLKNGSQESNPIYLQTTSVKQGIQEVIEKLWIGDFA VIKEVHEIEWIGHRVVHGGSLFHQPVLINASVKKDISNLSSLAPLHNPINLEGIELLEKIFPSIPHFAVFDTAFHRTMRE EIKTYPIPYEWKEKGIERYGFHGISHSYCAKQIKKWIKPQETPFKLINCHLGNGASLCAIRDGFSIDTTMGFTPMEGLMM GTRSGSIDPGILIYCLRNKNLSLEELDHLLNFESGLKGIGGTSDMREIHAFKNKQSQLALDMYIYRLKTGIGAMTASLGG IDALCFTGGIGENDSYLRKKTCEELAYLGIQLDLQKNQGGNQDKEISLHDSPVKVFVIHTQEEWMIAKSCLEYLT
Sequences:
>Translated_395_residues MPKVLVMNAGSSSHKLSLFSDKIENAGSALWKAHIEWGKKNPSYTLKNGSQESNPIYLQTTSVKQGIQEVIEKLWIGDFA VIKEVHEIEWIGHRVVHGGSLFHQPVLINASVKKDISNLSSLAPLHNPINLEGIELLEKIFPSIPHFAVFDTAFHRTMRE EIKTYPIPYEWKEKGIERYGFHGISHSYCAKQIKKWIKPQETPFKLINCHLGNGASLCAIRDGFSIDTTMGFTPMEGLMM GTRSGSIDPGILIYCLRNKNLSLEELDHLLNFESGLKGIGGTSDMREIHAFKNKQSQLALDMYIYRLKTGIGAMTASLGG IDALCFTGGIGENDSYLRKKTCEELAYLGIQLDLQKNQGGNQDKEISLHDSPVKVFVIHTQEEWMIAKSCLEYLT >Mature_394_residues PKVLVMNAGSSSHKLSLFSDKIENAGSALWKAHIEWGKKNPSYTLKNGSQESNPIYLQTTSVKQGIQEVIEKLWIGDFAV IKEVHEIEWIGHRVVHGGSLFHQPVLINASVKKDISNLSSLAPLHNPINLEGIELLEKIFPSIPHFAVFDTAFHRTMREE IKTYPIPYEWKEKGIERYGFHGISHSYCAKQIKKWIKPQETPFKLINCHLGNGASLCAIRDGFSIDTTMGFTPMEGLMMG TRSGSIDPGILIYCLRNKNLSLEELDHLLNFESGLKGIGGTSDMREIHAFKNKQSQLALDMYIYRLKTGIGAMTASLGGI DALCFTGGIGENDSYLRKKTCEELAYLGIQLDLQKNQGGNQDKEISLHDSPVKVFVIHTQEEWMIAKSCLEYLT
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI145693184, Length=394, Percent_Identity=38.8324873096447, Blast_Score=264, Evalue=6e-72, Organism=Escherichia coli, GI1788633, Length=406, Percent_Identity=38.6699507389163, Blast_Score=241, Evalue=8e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACKA_PARUW (Q6MBG3)
Other databases:
- EMBL: BX908798 - RefSeq: YP_008361.1 - HSSP: P38502 - ProteinModelPortal: Q6MBG3 - SMR: Q6MBG3 - STRING: Q6MBG3 - GeneID: 2781315 - GenomeReviews: BX908798_GR - KEGG: pcu:pc1362 - NMPDR: fig|264201.1.peg.1362 - eggNOG: COG0282 - HOGENOM: HBG285863 - OMA: LVERISM - PhylomeDB: Q6MBG3 - BioCyc: CPRO264201:PC1362-MONOMER - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 44254; Mature: 44122
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVLVMNAGSSSHKLSLFSDKIENAGSALWKAHIEWGKKNPSYTLKNGSQESNPIYLQT CCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEE TSVKQGIQEVIEKLWIGDFAVIKEVHEIEWIGHRVVHGGSLFHQPVLINASVKKDISNLS CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCHHCCCEEEECHHHHHHHHHH SLAPLHNPINLEGIELLEKIFPSIPHFAVFDTAFHRTMREEIKTYPIPYEWKEKGIERYG HHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHC FHGISHSYCAKQIKKWIKPQETPFKLINCHLGNGASLCAIRDGFSIDTTMGFTPMEGLMM CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCEECCCCCCCCHHHHEE GTRSGSIDPGILIYCLRNKNLSLEELDHLLNFESGLKGIGGTSDMREIHAFKNKQSQLAL ECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHH DMYIYRLKTGIGAMTASLGGIDALCFTGGIGENDSYLRKKTCEELAYLGIQLDLQKNQGG HHHHHHHHHCHHHHHHHCCCCEEHEEECCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCC NQDKEISLHDSPVKVFVIHTQEEWMIAKSCLEYLT CCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure PKVLVMNAGSSSHKLSLFSDKIENAGSALWKAHIEWGKKNPSYTLKNGSQESNPIYLQT CCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEE TSVKQGIQEVIEKLWIGDFAVIKEVHEIEWIGHRVVHGGSLFHQPVLINASVKKDISNLS CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCHHCCCEEEECHHHHHHHHHH SLAPLHNPINLEGIELLEKIFPSIPHFAVFDTAFHRTMREEIKTYPIPYEWKEKGIERYG HHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHC FHGISHSYCAKQIKKWIKPQETPFKLINCHLGNGASLCAIRDGFSIDTTMGFTPMEGLMM CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCEECCCCCCCCHHHHEE GTRSGSIDPGILIYCLRNKNLSLEELDHLLNFESGLKGIGGTSDMREIHAFKNKQSQLAL ECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHH DMYIYRLKTGIGAMTASLGGIDALCFTGGIGENDSYLRKKTCEELAYLGIQLDLQKNQGG HHHHHHHHHCHHHHHHHCCCCEEHEEECCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCC NQDKEISLHDSPVKVFVIHTQEEWMIAKSCLEYLT CCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA