Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446989

Identifier: 46446989

GI number: 46446989

Start: 1618094

End: 1620697

Strand: Reverse

Name: 46446989

Synonym: pc1355

Alternate gene names: NA

Gene position: 1620697-1618094 (Counterclockwise)

Preceding gene: 46446990

Following gene: 46446986

Centisome position: 67.12

GC content: 36.98

Gene sequence:

>2604_bases
TTGGATTGGCATGCAAATTGCACCTTAGGAGGAAAAAAAGGGGGTTTAGCTATGGTCAACCCAACCGGATCTTTTCCAAG
TCATCCATCTCAAGAACAAAATATCCAACAACCTGCGTCGCAAGCTGCAGAAGGAAAAAAAAGAAAACAAAAAGGAAAGG
AAAAAATAGAAGATACTCATCAAAAAACTGAGGAAGCGGCTCAGACCGCCATTCAAAGTTTATCTACTCCCGAATCATCT
CCCCCTCATAAATTTCCTAGGCGAACAAAAGAAGAAGAAGAGGCCTTAGAAGCCGAGGATACTAGTTCTTTGAATAGCAG
CAGGAGTTTGCCGACAAGAAAAAGCACTCAAAAAGAGAGTAAAGTTTATCAAGAAACTTTTCCGGCCGCAATGCCTTCTA
GGGGAACAAAATCCAAAGCAGGGGATAAAATAAACCCACCTAAACTTGAAAAGCGTTCTTCCTTTGGTTTAGAGAGCAAT
AGAGAAATTTATATCAATGCAAAAGAATTTATTGCAAAAGCTGTAGAACCCTTTTTCCAAATTAATAACCCCCTTTCTTT
GAAGCTTGGTCAATTCATTGCTAAAATGGATGCCTATAATAATCGGGGAGATAAAAATGAAAATCCCCCTGCAGAATTAA
TTGACATGCATGCGCAAGCGCGGCTACTTCTTTTTCTTCACATGGGCATAGCTTACTCTGGGTTGGAATGTCAAATTGAT
TGGCTACCAGCCAAAAAACAATTTTACATCGGCTCAGAACAAACAGGCACAGAAGCTTGTCATCACTCTTTATTTGCCGA
AGTGAATGATACCTATCTTTATACGCTTAAAGAGTCTTTACTGGAAGCAGTACGCGCATTGCGTGAAAACCAAAGAGAAA
TTCCTCTTCCGTTAAAAGAAAGGCTCCTTAAGATAAATGTCTCTAAAGAAAGACTTCAAAAGACAATTAAAGCTATTTTA
GACAATAAGATTCGCGCATCTGAGGGAATTGAAAACTTGTGGAAAGAGACATTTCCTTCTTCTCCAGAACATCCAGAGTT
AAAAAAGTCTTTAGTGGAAGCAGTACGCGCATTGCGTGATAACCAAAAAGAAATTCCTCTTCCGTTAAAAGAAAGGCTCC
TTGAGCTAAATGTCTCTGAAGAAGGACTTCAAAAGACCATTAAAGCTATTTTAGACAATAAGATTTACGCATCTGAGGGA
ATTGAAAACTTATGGAAAGAGACATTTCCTCTTTCTATAGAGAATCAAGCCCTAGCAAAAGATTCTTTATTCCAATATAT
AGAGGAGCGACAAAGGCAGCCGCAAGAAATAATAGGCAAGCTGCAAACAAAGGGGATTCCTAGAAATGTTATTAATGCAT
TACTAAAAAATAAACGATTAAAGAGAGTGGATGTAAATGTGGATGAAGTGTTTAAAAAATGGGTGAATCCTTCTTTATGG
GCAAACACGAACTTTTATTTTTTAAACCATCATACTTTAATAGCTCCTTCTGCCTTAAATAAAGTGGACGATTTAATTGA
AAAAAAAGTGCGCTCCGGTGCTATGAAAATCCTTAATGCTATTGCCAAAAAAGAGATTAGCCCTTTGGAAGGTACTCAAG
AAGTAGGCAAACTCATTATTGCAAGCCTGGGTAAAAGCCTAAAGTTTACACGAAAAAAAATTGCTTTAGTCACCGATTTA
GAAAAAGAATTGGAGAAGCTGGGCAAACTTTTTAACGGGTTAGAGATTGAAAAAACTAGCGCTAGTCACACCCCCTTGTA
CAAAAAGTTAGAAAATTTAAAAGAGGTGCAAAGCACCGTTAATGAACTCATGCGCATTCTCGATGCATTAGCAAATCTTA
ATCACTCTCCTTCCCATATAGCGATTGTGGATTTTAAAATAGAACAAGCAAGAATTAAAACAATGCAAGACACGTTCAAT
GAATTTAGAACAGAGTTAACAGGACGGATGGATAAAACATTTGAAAGTCGCTATCAACAGTATCGGCAAGCCCCTTTTTT
TCAACATCAAAAACAAATCGAGGAACTAAAAATCACCATAGAGGAGAAAGAGAGGGAAAAAGAAGAGTTTGAGCAAGAAT
TGAAAGAAAAGGATTTGACTCCAGAAGAAAAGAGGTTGTTGTTCTCACTAGAAGAGAATCTACCAGAAAATTCAACTTTC
CTAAATCTTGAACCTAAAGAAAAGCTAGATTTAGCTGAAAAGTTATCATATGGCGAAGCTAAACGTTATGAAGCTTATAA
AAGTGTTATAGATAAATTTCTGGAAAAAACTGCCTTAAAAAAGGGCCTAGAGGAAATAAAGAGAATAATTCAGCAAAATC
GACGTTTAATGCAGGAACTAGGAGAAGGGAAAGAGCCTGAAGATGCTTATTTCAGAACACAATATCTAAACATTTCAAAA
GTAATAATTGAATGGTCAATAAACTCTCAGTTTAGATTAATTCATTATCCTATGTCTAGCGCTACGCTTTCTTTTGTCGA
AGAGTTATTAAACCTACAATCCAGGGCGACTTTTCAGCTTGCCCAGGATTTGGAGCAAGCTGATCCTTTTATTTATGAAG
AGGAAGCTTTAAAGCAAGCCTTGATTAGACGGTCAACTGAATAA

Upstream 100 bases:

>100_bases
TAGATATTTTCATAGAGAATTCGCTTGGTTTTGATTTTCTATTGCATTCTCAGTTCAAGCTCATTTTTCCGCTATTAAAA
ACCAACTTTTCATTTTCACT

Downstream 100 bases:

>100_bases
GCTAAATTTCAAAGCTTAAGGATGTGAATGGGGGAGTGAAGCCTTAGCAAAGTCCCAAACATCTAACCCCCCTTCTTTAT
CGCAGCAAGCCAAACGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MDWHANCTLGGKKGGLAMVNPTGSFPSHPSQEQNIQQPASQAAEGKKRKQKGKEKIEDTHQKTEEAAQTAIQSLSTPESS
PPHKFPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTQKESKVYQETFPAAMPSRGTKSKAGDKINPPKLEKRSSFGLESN
REIYINAKEFIAKAVEPFFQINNPLSLKLGQFIAKMDAYNNRGDKNENPPAELIDMHAQARLLLFLHMGIAYSGLECQID
WLPAKKQFYIGSEQTGTEACHHSLFAEVNDTYLYTLKESLLEAVRALRENQREIPLPLKERLLKINVSKERLQKTIKAIL
DNKIRASEGIENLWKETFPSSPEHPELKKSLVEAVRALRDNQKEIPLPLKERLLELNVSEEGLQKTIKAILDNKIYASEG
IENLWKETFPLSIENQALAKDSLFQYIEERQRQPQEIIGKLQTKGIPRNVINALLKNKRLKRVDVNVDEVFKKWVNPSLW
ANTNFYFLNHHTLIAPSALNKVDDLIEKKVRSGAMKILNAIAKKEISPLEGTQEVGKLIIASLGKSLKFTRKKIALVTDL
EKELEKLGKLFNGLEIEKTSASHTPLYKKLENLKEVQSTVNELMRILDALANLNHSPSHIAIVDFKIEQARIKTMQDTFN
EFRTELTGRMDKTFESRYQQYRQAPFFQHQKQIEELKITIEEKEREKEEFEQELKEKDLTPEEKRLLFSLEENLPENSTF
LNLEPKEKLDLAEKLSYGEAKRYEAYKSVIDKFLEKTALKKGLEEIKRIIQQNRRLMQELGEGKEPEDAYFRTQYLNISK
VIIEWSINSQFRLIHYPMSSATLSFVEELLNLQSRATFQLAQDLEQADPFIYEEEALKQALIRRSTE

Sequences:

>Translated_867_residues
MDWHANCTLGGKKGGLAMVNPTGSFPSHPSQEQNIQQPASQAAEGKKRKQKGKEKIEDTHQKTEEAAQTAIQSLSTPESS
PPHKFPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTQKESKVYQETFPAAMPSRGTKSKAGDKINPPKLEKRSSFGLESN
REIYINAKEFIAKAVEPFFQINNPLSLKLGQFIAKMDAYNNRGDKNENPPAELIDMHAQARLLLFLHMGIAYSGLECQID
WLPAKKQFYIGSEQTGTEACHHSLFAEVNDTYLYTLKESLLEAVRALRENQREIPLPLKERLLKINVSKERLQKTIKAIL
DNKIRASEGIENLWKETFPSSPEHPELKKSLVEAVRALRDNQKEIPLPLKERLLELNVSEEGLQKTIKAILDNKIYASEG
IENLWKETFPLSIENQALAKDSLFQYIEERQRQPQEIIGKLQTKGIPRNVINALLKNKRLKRVDVNVDEVFKKWVNPSLW
ANTNFYFLNHHTLIAPSALNKVDDLIEKKVRSGAMKILNAIAKKEISPLEGTQEVGKLIIASLGKSLKFTRKKIALVTDL
EKELEKLGKLFNGLEIEKTSASHTPLYKKLENLKEVQSTVNELMRILDALANLNHSPSHIAIVDFKIEQARIKTMQDTFN
EFRTELTGRMDKTFESRYQQYRQAPFFQHQKQIEELKITIEEKEREKEEFEQELKEKDLTPEEKRLLFSLEENLPENSTF
LNLEPKEKLDLAEKLSYGEAKRYEAYKSVIDKFLEKTALKKGLEEIKRIIQQNRRLMQELGEGKEPEDAYFRTQYLNISK
VIIEWSINSQFRLIHYPMSSATLSFVEELLNLQSRATFQLAQDLEQADPFIYEEEALKQALIRRSTE
>Mature_867_residues
MDWHANCTLGGKKGGLAMVNPTGSFPSHPSQEQNIQQPASQAAEGKKRKQKGKEKIEDTHQKTEEAAQTAIQSLSTPESS
PPHKFPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTQKESKVYQETFPAAMPSRGTKSKAGDKINPPKLEKRSSFGLESN
REIYINAKEFIAKAVEPFFQINNPLSLKLGQFIAKMDAYNNRGDKNENPPAELIDMHAQARLLLFLHMGIAYSGLECQID
WLPAKKQFYIGSEQTGTEACHHSLFAEVNDTYLYTLKESLLEAVRALRENQREIPLPLKERLLKINVSKERLQKTIKAIL
DNKIRASEGIENLWKETFPSSPEHPELKKSLVEAVRALRDNQKEIPLPLKERLLELNVSEEGLQKTIKAILDNKIYASEG
IENLWKETFPLSIENQALAKDSLFQYIEERQRQPQEIIGKLQTKGIPRNVINALLKNKRLKRVDVNVDEVFKKWVNPSLW
ANTNFYFLNHHTLIAPSALNKVDDLIEKKVRSGAMKILNAIAKKEISPLEGTQEVGKLIIASLGKSLKFTRKKIALVTDL
EKELEKLGKLFNGLEIEKTSASHTPLYKKLENLKEVQSTVNELMRILDALANLNHSPSHIAIVDFKIEQARIKTMQDTFN
EFRTELTGRMDKTFESRYQQYRQAPFFQHQKQIEELKITIEEKEREKEEFEQELKEKDLTPEEKRLLFSLEENLPENSTF
LNLEPKEKLDLAEKLSYGEAKRYEAYKSVIDKFLEKTALKKGLEEIKRIIQQNRRLMQELGEGKEPEDAYFRTQYLNISK
VIIEWSINSQFRLIHYPMSSATLSFVEELLNLQSRATFQLAQDLEQADPFIYEEEALKQALIRRSTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99669; Mature: 99669

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWHANCTLGGKKGGLAMVNPTGSFPSHPSQEQNIQQPASQAAEGKKRKQKGKEKIEDTH
CCCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKTEEAAQTAIQSLSTPESSPPHKFPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTQKES
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
KVYQETFPAAMPSRGTKSKAGDKINPPKLEKRSSFGLESNREIYINAKEFIAKAVEPFFQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH
INNPLSLKLGQFIAKMDAYNNRGDKNENPPAELIDMHAQARLLLFLHMGIAYSGLECQID
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
WLPAKKQFYIGSEQTGTEACHHSLFAEVNDTYLYTLKESLLEAVRALRENQREIPLPLKE
EECCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RLLKINVSKERLQKTIKAILDNKIRASEGIENLWKETFPSSPEHPELKKSLVEAVRALRD
HHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
NQKEIPLPLKERLLELNVSEEGLQKTIKAILDNKIYASEGIENLWKETFPLSIENQALAK
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
DSLFQYIEERQRQPQEIIGKLQTKGIPRNVINALLKNKRLKRVDVNVDEVFKKWVNPSLW
HHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCEE
ANTNFYFLNHHTLIAPSALNKVDDLIEKKVRSGAMKILNAIAKKEISPLEGTQEVGKLII
CCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ASLGKSLKFTRKKIALVTDLEKELEKLGKLFNGLEIEKTSASHTPLYKKLENLKEVQSTV
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH
NELMRILDALANLNHSPSHIAIVDFKIEQARIKTMQDTFNEFRTELTGRMDKTFESRYQQ
HHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQAPFFQHQKQIEELKITIEEKEREKEEFEQELKEKDLTPEEKRLLFSLEENLPENSTF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEE
LNLEPKEKLDLAEKLSYGEAKRYEAYKSVIDKFLEKTALKKGLEEIKRIIQQNRRLMQEL
EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEGKEPEDAYFRTQYLNISKVIIEWSINSQFRLIHYPMSSATLSFVEELLNLQSRATFQL
CCCCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
AQDLEQADPFIYEEEALKQALIRRSTE
HHHHHHCCCCEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDWHANCTLGGKKGGLAMVNPTGSFPSHPSQEQNIQQPASQAAEGKKRKQKGKEKIEDTH
CCCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKTEEAAQTAIQSLSTPESSPPHKFPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTQKES
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
KVYQETFPAAMPSRGTKSKAGDKINPPKLEKRSSFGLESNREIYINAKEFIAKAVEPFFQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH
INNPLSLKLGQFIAKMDAYNNRGDKNENPPAELIDMHAQARLLLFLHMGIAYSGLECQID
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
WLPAKKQFYIGSEQTGTEACHHSLFAEVNDTYLYTLKESLLEAVRALRENQREIPLPLKE
EECCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RLLKINVSKERLQKTIKAILDNKIRASEGIENLWKETFPSSPEHPELKKSLVEAVRALRD
HHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
NQKEIPLPLKERLLELNVSEEGLQKTIKAILDNKIYASEGIENLWKETFPLSIENQALAK
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
DSLFQYIEERQRQPQEIIGKLQTKGIPRNVINALLKNKRLKRVDVNVDEVFKKWVNPSLW
HHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCEE
ANTNFYFLNHHTLIAPSALNKVDDLIEKKVRSGAMKILNAIAKKEISPLEGTQEVGKLII
CCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ASLGKSLKFTRKKIALVTDLEKELEKLGKLFNGLEIEKTSASHTPLYKKLENLKEVQSTV
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH
NELMRILDALANLNHSPSHIAIVDFKIEQARIKTMQDTFNEFRTELTGRMDKTFESRYQQ
HHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQAPFFQHQKQIEELKITIEEKEREKEEFEQELKEKDLTPEEKRLLFSLEENLPENSTF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEE
LNLEPKEKLDLAEKLSYGEAKRYEAYKSVIDKFLEKTALKKGLEEIKRIIQQNRRLMQEL
EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEGKEPEDAYFRTQYLNISKVIIEWSINSQFRLIHYPMSSATLSFVEELLNLQSRATFQL
CCCCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
AQDLEQADPFIYEEEALKQALIRRSTE
HHHHHHCCCCEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA