Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46446990
Identifier: 46446990
GI number: 46446990
Start: 1620670
End: 1620855
Strand: Reverse
Name: 46446990
Synonym: pc1356
Alternate gene names: NA
Gene position: 1620855-1620670 (Counterclockwise)
Preceding gene: 46446991
Following gene: 46446989
Centisome position: 67.13
GC content: 32.26
Gene sequence:
>186_bases TTGGGTAGTTTTGCAAATTTAAGCAGGTCAAAAAAAACGGCTATTTATTTCTTTTACCTAGATATTTTCATAGAGAATTC GCTTGGTTTTGATTTTCTATTGCATTCTCAGTTCAAGCTCATTTTTCCGCTATTAAAAACCAACTTTTCATTTTCACTTT GGATTGGCATGCAAATTGCACCTTAG
Upstream 100 bases:
>100_bases CTGACCAGATTACTTGCTAACTGGTTGATGTTGACTCCAAAGAATGGTTTCATAATAGACATTAAATTTATCCGTGAAAT AGAGAGCTTTTTTTAATGAT
Downstream 100 bases:
>100_bases GAGGAAAAAAAGGGGGTTTAGCTATGGTCAACCCAACCGGATCTTTTCCAAGTCATCCATCTCAAGAACAAAATATCCAA CAACCTGCGTCGCAAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MGSFANLSRSKKTAIYFFYLDIFIENSLGFDFLLHSQFKLIFPLLKTNFSFSLWIGMQIAP
Sequences:
>Translated_61_residues MGSFANLSRSKKTAIYFFYLDIFIENSLGFDFLLHSQFKLIFPLLKTNFSFSLWIGMQIAP >Mature_60_residues GSFANLSRSKKTAIYFFYLDIFIENSLGFDFLLHSQFKLIFPLLKTNFSFSLWIGMQIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7116; Mature: 6985
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFANLSRSKKTAIYFFYLDIFIENSLGFDFLLHSQFKLIFPLLKTNFSFSLWIGMQIA CCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCHHHEEHHHHCCCCEEEEEEEEEC P C >Mature Secondary Structure GSFANLSRSKKTAIYFFYLDIFIENSLGFDFLLHSQFKLIFPLLKTNFSFSLWIGMQIA CCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEECCCHHHEEHHHHCCCCEEEEEEEEEC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA