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The map label for this gene is pabC [H]

Identifier: 46446959

GI number: 46446959

Start: 1581944

End: 1582786

Strand: Reverse

Name: pabC [H]

Synonym: pc1325

Alternate gene names: 46446959

Gene position: 1582786-1581944 (Counterclockwise)

Preceding gene: 46446960

Following gene: 46446958

Centisome position: 65.55

GC content: 34.99

Gene sequence:

>843_bases
TTGGTACCGCTAATGGTCAATAAATGGGTTTGTCTAAATGGCCAATTAATGCCAGAAAATCAAGCGAGTATTCCTATCAC
AGATCGAGGATTTTTATTTGGAGATGGCCTTTTTACAACCTTGCGAGTTGAGCAAGGGCAAGTTGAGTTTTGGCAATCTC
ATTTAGAAAGATTAGTCCACCAATGCCACCAATTACGGCTCATTTTTCCTCGATTAGATTTTAAATGGATAGAAGAATTA
ATCAGGCTAAATTTGGCTCACAAAGGAATCTGGCGTTTAAAAATGATGATTACAGGGGGAGATGAACGTTATTTATCTCT
TCCCTTACGGCAATCCTCTATTCAATTATTAACTTTACAATCGTACAAATTGGAACCATTTACTCCTTGTCGACTAACTT
TATATCCCAGTCCCATCGTTAAACCGACAGCACATTTAAAATCATTATCCTATCTTGATCGATTATATGTTTATGATTAT
GCAAATTTAAAAGGATATGACGATGCGGTGGTCTGTAACTGTGAAGCTTATTTGTTAGAAACTGCTTTTTCGAATTTATT
TTGGATAAAGAATTGTCAATTATATATCCCCGATCCCAGCCTTTCATATTTACAAGGGATCTTTTTAACTAACCTCATCA
AATATTTGAAGTTTCCTATCCATTTTTTTAAAGGAGGCATAGAAGATATCCCGAACGAAGCTACTATTTTTATTAGTAAC
TCCTTGAATCATCTACGTCCCGTCACTGAAATTGATCATCGAATTTTTTCCCGTCACTTGGATCTAGAAAAACAACTACA
AGAAGTCATTCAACTAGCTTTATCTAATAACAGATATCCATAA

Upstream 100 bases:

>100_bases
CAAATAATATCAGAAATAGACAATTCAGCAGAAACGCCACGCATTAGTCGGACGCAGTTGGTTGCCAACCCCCAAAAACC
AGTTAGGCGTAAATTGGATT

Downstream 100 bases:

>100_bases
TTGACAAGGCTGATTCTTAAGATATTCTGCAGACTAGGATTGGTAAAAGAAGACGAACATAATTTTAAGCGAGAATTGAA
TTTGGATGTTAATTTTTTAG

Product: putative 4-amino-4-deoxychorismate lyase

Products: NA

Alternate protein names: BCAT; Transaminase B [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MVPLMVNKWVCLNGQLMPENQASIPITDRGFLFGDGLFTTLRVEQGQVEFWQSHLERLVHQCHQLRLIFPRLDFKWIEEL
IRLNLAHKGIWRLKMMITGGDERYLSLPLRQSSIQLLTLQSYKLEPFTPCRLTLYPSPIVKPTAHLKSLSYLDRLYVYDY
ANLKGYDDAVVCNCEAYLLETAFSNLFWIKNCQLYIPDPSLSYLQGIFLTNLIKYLKFPIHFFKGGIEDIPNEATIFISN
SLNHLRPVTEIDHRIFSRHLDLEKQLQEVIQLALSNNRYP

Sequences:

>Translated_280_residues
MVPLMVNKWVCLNGQLMPENQASIPITDRGFLFGDGLFTTLRVEQGQVEFWQSHLERLVHQCHQLRLIFPRLDFKWIEEL
IRLNLAHKGIWRLKMMITGGDERYLSLPLRQSSIQLLTLQSYKLEPFTPCRLTLYPSPIVKPTAHLKSLSYLDRLYVYDY
ANLKGYDDAVVCNCEAYLLETAFSNLFWIKNCQLYIPDPSLSYLQGIFLTNLIKYLKFPIHFFKGGIEDIPNEATIFISN
SLNHLRPVTEIDHRIFSRHLDLEKQLQEVIQLALSNNRYP
>Mature_280_residues
MVPLMVNKWVCLNGQLMPENQASIPITDRGFLFGDGLFTTLRVEQGQVEFWQSHLERLVHQCHQLRLIFPRLDFKWIEEL
IRLNLAHKGIWRLKMMITGGDERYLSLPLRQSSIQLLTLQSYKLEPFTPCRLTLYPSPIVKPTAHLKSLSYLDRLYVYDY
ANLKGYDDAVVCNCEAYLLETAFSNLFWIKNCQLYIPDPSLSYLQGIFLTNLIKYLKFPIHFFKGGIEDIPNEATIFISN
SLNHLRPVTEIDHRIFSRHLDLEKQLQEVIQLALSNNRYP

Specific function: Acts on leucine, isoleucine and valine [H]

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787338, Length=249, Percent_Identity=26.5060240963855, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001544
- InterPro:   IPR018300
- InterPro:   IPR005785 [H]

Pfam domain/function: PF01063 Aminotran_4 [H]

EC number: =2.6.1.42 [H]

Molecular weight: Translated: 32777; Mature: 32777

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLMVNKWVCLNGQLMPENQASIPITDRGFLFGDGLFTTLRVEQGQVEFWQSHLERLVH
CCCEEECCEEEECCEECCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHH
QCHQLRLIFPRLDFKWIEELIRLNLAHKGIWRLKMMITGGDERYLSLPLRQSSIQLLTLQ
HHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEE
SYKLEPFTPCRLTLYPSPIVKPTAHLKSLSYLDRLYVYDYANLKGYDDAVVCNCEAYLLE
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECHHHHHHH
TAFSNLFWIKNCQLYIPDPSLSYLQGIFLTNLIKYLKFPIHFFKGGIEDIPNEATIFISN
HHHHCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEC
SLNHLRPVTEIDHRIFSRHLDLEKQLQEVIQLALSNNRYP
CCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVPLMVNKWVCLNGQLMPENQASIPITDRGFLFGDGLFTTLRVEQGQVEFWQSHLERLVH
CCCEEECCEEEECCEECCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHH
QCHQLRLIFPRLDFKWIEELIRLNLAHKGIWRLKMMITGGDERYLSLPLRQSSIQLLTLQ
HHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEE
SYKLEPFTPCRLTLYPSPIVKPTAHLKSLSYLDRLYVYDYANLKGYDDAVVCNCEAYLLE
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECHHHHHHH
TAFSNLFWIKNCQLYIPDPSLSYLQGIFLTNLIKYLKFPIHFFKGGIEDIPNEATIFISN
HHHHCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEC
SLNHLRPVTEIDHRIFSRHLDLEKQLQEVIQLALSNNRYP
CCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]