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The map label for this gene is yloC [H]

Identifier: 46446294

GI number: 46446294

Start: 805188

End: 806072

Strand: Direct

Name: yloC [H]

Synonym: pc0660

Alternate gene names: 46446294

Gene position: 805188-806072 (Clockwise)

Preceding gene: 46446293

Following gene: 46446296

Centisome position: 33.35

GC content: 38.08

Gene sequence:

>885_bases
ATGCTTAAAAGTATGACTGCCTTTGGGCGAGCCACATTTAATACGGAAATGGGGCATTTTACTGTTGAAATTCAATCCGT
CAATCGGAAGTTTTTAGAAATTAATGTCTCTCTTCCTCCAGAATTAAGCTATTTTGATGTAGAAATAAAAAAATGGATAC
ATCCTTTTATTACTAGAGGTCAGGTCTCTGTCAAAATTACTGCTTCATTTGAAGGAAAATCGCCTTTTATCATTGTCCCT
AATTTAGCTTTGGCAAGGCAAATGAAAGCGGCTTGGGAAGAAATCGCTCGTGAGACAGGATTTGAGATGGATGAAATCAA
ACTTTCTCTTTTATCTAAAGCGGATGATATTCTTCTTTTTGAAGAAAACCGTTCAGAAGAAGATGCTTATCGGCGTATTT
TAAGGCAGGTCCTGGATCAGGCCTTAACAAGTTTTATCCAAATGAAATCCCATGAAGGGGCTGTTTTACAAGGGGATATT
TTAGCTAGGGCAGAAAAGATTCGGCGAGCAATCAAAATGATTGAAGAAAGAAGCCCTTTTGCAACTAAAAAATATCGCGA
AAAGTTGCTAGCCCGTTTGGAAGAAATTTTGCCTGGTCAAATCGAAAATGAAGAACGCATTTTGAGAGAAATTGCTTTAT
TTGCTGAGAAAATTGACGTGGTGGAGGAAATTGTTCGTTTTGACTGCCATCTCACAAGGTTTGAGGAGCGCGTTCAATCG
GCTGATGCGAGTGTGGGAAAAACACTGGAGTTTATTTTGCAAGAACTTGGACGAGAAGTTAATACCGTTGGGAGTAAGTC
TTCTGACATAGAAATTGCTAAATTAGTCATTGATATCAAGAGTGAATTAGAACGAATCCGTGAGCAAATTCAAAATATCG
AATAG

Upstream 100 bases:

>100_bases
ATAAATCAATTCAAAAATAGGAATATACGTGATGCTAAAATTATTTTTGCATTTATTAATGGATAAGCTAAAAATTAAGT
TTGATTGAGAGAGATAATTT

Downstream 100 bases:

>100_bases
TTTCAAATTAATCTACTTATGCTTTAAGCTTTTAAATATAGCTTTTCGCTTAACGGATAAAGCTGCAAGGGAAATTTAAA
ATTGGAATACATTTTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLKSMTAFGRATFNTEMGHFTVEIQSVNRKFLEINVSLPPELSYFDVEIKKWIHPFITRGQVSVKITASFEGKSPFIIVP
NLALARQMKAAWEEIARETGFEMDEIKLSLLSKADDILLFEENRSEEDAYRRILRQVLDQALTSFIQMKSHEGAVLQGDI
LARAEKIRRAIKMIEERSPFATKKYREKLLARLEEILPGQIENEERILREIALFAEKIDVVEEIVRFDCHLTRFEERVQS
ADASVGKTLEFILQELGREVNTVGSKSSDIEIAKLVIDIKSELERIREQIQNIE

Sequences:

>Translated_294_residues
MLKSMTAFGRATFNTEMGHFTVEIQSVNRKFLEINVSLPPELSYFDVEIKKWIHPFITRGQVSVKITASFEGKSPFIIVP
NLALARQMKAAWEEIARETGFEMDEIKLSLLSKADDILLFEENRSEEDAYRRILRQVLDQALTSFIQMKSHEGAVLQGDI
LARAEKIRRAIKMIEERSPFATKKYREKLLARLEEILPGQIENEERILREIALFAEKIDVVEEIVRFDCHLTRFEERVQS
ADASVGKTLEFILQELGREVNTVGSKSSDIEIAKLVIDIKSELERIREQIQNIE
>Mature_294_residues
MLKSMTAFGRATFNTEMGHFTVEIQSVNRKFLEINVSLPPELSYFDVEIKKWIHPFITRGQVSVKITASFEGKSPFIIVP
NLALARQMKAAWEEIARETGFEMDEIKLSLLSKADDILLFEENRSEEDAYRRILRQVLDQALTSFIQMKSHEGAVLQGDI
LARAEKIRRAIKMIEERSPFATKKYREKLLARLEEILPGQIENEERILREIALFAEKIDVVEEIVRFDCHLTRFEERVQS
ADASVGKTLEFILQELGREVNTVGSKSSDIEIAKLVIDIKSELERIREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=31.0810810810811, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33929; Mature: 33929

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSMTAFGRATFNTEMGHFTVEIQSVNRKFLEINVSLPPELSYFDVEIKKWIHPFITRG
CCCCHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
QVSVKITASFEGKSPFIIVPNLALARQMKAAWEEIARETGFEMDEIKLSLLSKADDILLF
EEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
EENRSEEDAYRRILRQVLDQALTSFIQMKSHEGAVLQGDILARAEKIRRAIKMIEERSPF
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
ATKKYREKLLARLEEILPGQIENEERILREIALFAEKIDVVEEIVRFDCHLTRFEERVQS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADASVGKTLEFILQELGREVNTVGSKSSDIEIAKLVIDIKSELERIREQIQNIE
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKSMTAFGRATFNTEMGHFTVEIQSVNRKFLEINVSLPPELSYFDVEIKKWIHPFITRG
CCCCHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
QVSVKITASFEGKSPFIIVPNLALARQMKAAWEEIARETGFEMDEIKLSLLSKADDILLF
EEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
EENRSEEDAYRRILRQVLDQALTSFIQMKSHEGAVLQGDILARAEKIRRAIKMIEERSPF
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
ATKKYREKLLARLEEILPGQIENEERILREIALFAEKIDVVEEIVRFDCHLTRFEERVQS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADASVGKTLEFILQELGREVNTVGSKSSDIEIAKLVIDIKSELERIREQIQNIE
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]