Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is pepP [H]
Identifier: 46446221
GI number: 46446221
Start: 723285
End: 724478
Strand: Direct
Name: pepP [H]
Synonym: pc0587
Alternate gene names: 46446221
Gene position: 723285-724478 (Clockwise)
Preceding gene: 46446220
Following gene: 46446223
Centisome position: 29.96
GC content: 35.68
Gene sequence:
>1194_bases ATGGAATTTGAAAAAAAATTAATTGAAGTTCAACAACAATTAAAAAAAGAAAAGATCAATGGTTGGCTGCTTTATGATTT TAGGCATAGTAATTCTCTAGCTTATATTTTTTTAGAGATCCCTGCTTCAAAAATGCTTTCCAGGCGTTTTTTCTATTGGA TTCCGAGCTCAGGAGAACCCATCAAAATCGTTCCTCAAATTGAATCCCATACTCTGGATCATTTACCGGGAATAAAATGG ATTTACAAAAGTTGGCAGGAACTAGAAAGCCAGTTGTTTTCTCTGAAACTAGAAAATCATAAAGTTGCTATGGAATATTC TCCTTTTAATGCTTTGCCTACTCTTTCGAAAGTGGATGCAGGCACAATAGATTTCATGCGAAAAAATGGAGTAGAAGTTG TTAGTTCGGCAAATTTTATTCAACGTTATACCTGTGTTTGGAATCCTCAACAACTTCAAAGTCATTTAGAGGCAGCTGAA ATATTGAGCTTAATTGTAGACCAAACTTGGAATTTTATTGAGAAAAAATTAATTACTAGCCAAGCCGTTGATGAATACCA AGTTCAGCAATTTATGCTAAAACTTATGACCGAACACAATTGTGTGACAGCAGATCCTCCCACATGCGCTATCAATGCTA ATTCTGCTGATCCCCACTACAGCCCTAAAAAAGGTCAGGCATTGTCTATTCGACCTGGAGACTTCATCTTATTAGATCTT TGGTGCAAAAAAAATCAACCAAACTCTGTTTATGCAGATATTACAAGAGTTGGTGTGGCTGCAAAAAATGCACAAATAAA ACAAAAACATATTTTTAATCTTGTAAAAGAAACTCGAGATCGAGCAACTCTTTTTATTAAAGAAAATTATGAAGCAGGCC TTTCTATTCAGGGTTGGCAAGTTGATCAACTGTGTAGAGATGTGCTAAATGAAAAAGGGTATGGTGAATATTTTATTCAT CGAACTGGGCACAATATCGGACAAGATGTTCATGGACCTGGAGCTAACTTAGACAATTTTGAAACTCGAGATTTTCGGCA GCTAATCCCCGGAACTTGTTTCTCAATTGAACCTGGCATTTATCTTCCTCACGAGTTTGGCGTTCGTTTAGAATACGATG TGTATCTCTCTTTTGAAAAGAAAATACAAATCACTGGCGGAATTCAAGAAGAATTAGTTTGCCTAAATTTATGA
Upstream 100 bases:
>100_bases TTTTAGCTGAGCAGCAAGAGGTTTCACCCATGATATGGAACACTTTTCAGGAGTGGTTAAGGATTAATCAATTATTATAA AATTGTTTGGTTGGAATTTT
Downstream 100 bases:
>100_bases TAACAAAGAAGAGTCAAAGAATGAGTTATGAGTTATAGGAGTAAAAAATGAAAGTACCTCTTTTTTCATTTAAAATGAGT CGATTAGCTTTAATTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: X-Pro aminopeptidase; Aminoacylproline aminopeptidase; Aminopeptidase P; APP [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEFEKKLIEVQQQLKKEKINGWLLYDFRHSNSLAYIFLEIPASKMLSRRFFYWIPSSGEPIKIVPQIESHTLDHLPGIKW IYKSWQELESQLFSLKLENHKVAMEYSPFNALPTLSKVDAGTIDFMRKNGVEVVSSANFIQRYTCVWNPQQLQSHLEAAE ILSLIVDQTWNFIEKKLITSQAVDEYQVQQFMLKLMTEHNCVTADPPTCAINANSADPHYSPKKGQALSIRPGDFILLDL WCKKNQPNSVYADITRVGVAAKNAQIKQKHIFNLVKETRDRATLFIKENYEAGLSIQGWQVDQLCRDVLNEKGYGEYFIH RTGHNIGQDVHGPGANLDNFETRDFRQLIPGTCFSIEPGIYLPHEFGVRLEYDVYLSFEKKIQITGGIQEELVCLNL
Sequences:
>Translated_397_residues MEFEKKLIEVQQQLKKEKINGWLLYDFRHSNSLAYIFLEIPASKMLSRRFFYWIPSSGEPIKIVPQIESHTLDHLPGIKW IYKSWQELESQLFSLKLENHKVAMEYSPFNALPTLSKVDAGTIDFMRKNGVEVVSSANFIQRYTCVWNPQQLQSHLEAAE ILSLIVDQTWNFIEKKLITSQAVDEYQVQQFMLKLMTEHNCVTADPPTCAINANSADPHYSPKKGQALSIRPGDFILLDL WCKKNQPNSVYADITRVGVAAKNAQIKQKHIFNLVKETRDRATLFIKENYEAGLSIQGWQVDQLCRDVLNEKGYGEYFIH RTGHNIGQDVHGPGANLDNFETRDFRQLIPGTCFSIEPGIYLPHEFGVRLEYDVYLSFEKKIQITGGIQEELVCLNL >Mature_397_residues MEFEKKLIEVQQQLKKEKINGWLLYDFRHSNSLAYIFLEIPASKMLSRRFFYWIPSSGEPIKIVPQIESHTLDHLPGIKW IYKSWQELESQLFSLKLENHKVAMEYSPFNALPTLSKVDAGTIDFMRKNGVEVVSSANFIQRYTCVWNPQQLQSHLEAAE ILSLIVDQTWNFIEKKLITSQAVDEYQVQQFMLKLMTEHNCVTADPPTCAINANSADPHYSPKKGQALSIRPGDFILLDL WCKKNQPNSVYADITRVGVAAKNAQIKQKHIFNLVKETRDRATLFIKENYEAGLSIQGWQVDQLCRDVLNEKGYGEYFIH RTGHNIGQDVHGPGANLDNFETRDFRQLIPGTCFSIEPGIYLPHEFGVRLEYDVYLSFEKKIQITGGIQEELVCLNL
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Escherichia coli, GI1788728, Length=147, Percent_Identity=35.3741496598639, Blast_Score=79, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 45735; Mature: 45735
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEKKLIEVQQQLKKEKINGWLLYDFRHSNSLAYIFLEIPASKMLSRRFFYWIPSSGEP CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHCCEEEEEECCCCCC IKIVPQIESHTLDHLPGIKWIYKSWQELESQLFSLKLENHKVAMEYSPFNALPTLSKVDA EEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCCCHHCCC GTIDFMRKNGVEVVSSANFIQRYTCVWNPQQLQSHLEAAEILSLIVDQTWNFIEKKLITS CHHHHHHCCCHHHHHCCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVDEYQVQQFMLKLMTEHNCVTADPPTCAINANSADPHYSPKKGQALSIRPGDFILLDL HHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEE WCKKNQPNSVYADITRVGVAAKNAQIKQKHIFNLVKETRDRATLFIKENYEAGLSIQGWQ EECCCCCCCHHHHHHHHCEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCC VDQLCRDVLNEKGYGEYFIHRTGHNIGQDVHGPGANLDNFETRDFRQLIPGTCFSIEPGI HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCE YLPHEFGVRLEYDVYLSFEKKIQITGGIQEELVCLNL ECCHHCCCEEEEEEEEEEEEEEEEECCCCCCEEEECC >Mature Secondary Structure MEFEKKLIEVQQQLKKEKINGWLLYDFRHSNSLAYIFLEIPASKMLSRRFFYWIPSSGEP CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHCCEEEEEECCCCCC IKIVPQIESHTLDHLPGIKWIYKSWQELESQLFSLKLENHKVAMEYSPFNALPTLSKVDA EEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCCCHHCCC GTIDFMRKNGVEVVSSANFIQRYTCVWNPQQLQSHLEAAEILSLIVDQTWNFIEKKLITS CHHHHHHCCCHHHHHCCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVDEYQVQQFMLKLMTEHNCVTADPPTCAINANSADPHYSPKKGQALSIRPGDFILLDL HHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEE WCKKNQPNSVYADITRVGVAAKNAQIKQKHIFNLVKETRDRATLFIKENYEAGLSIQGWQ EECCCCCCCHHHHHHHHCEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCC VDQLCRDVLNEKGYGEYFIHRTGHNIGQDVHGPGANLDNFETRDFRQLIPGTCFSIEPGI HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCE YLPHEFGVRLEYDVYLSFEKKIQITGGIQEELVCLNL ECCHHCCCEEEEEEEEEEEEEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]