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The map label for this gene is 46446218

Identifier: 46446218

GI number: 46446218

Start: 719062

End: 719631

Strand: Direct

Name: 46446218

Synonym: pc0584

Alternate gene names: NA

Gene position: 719062-719631 (Clockwise)

Preceding gene: 46446217

Following gene: 46446219

Centisome position: 29.78

GC content: 32.46

Gene sequence:

>570_bases
ATGATCTTACCTATTAACTTAGAGCGATCTCAAACAGCTTTGTTGATCATTGATATGCAAGATAAGATATTTGCGACAGT
TGATCATGGAGTAGATGTATTGAAAGCTATTTTTAAAACGATCAAAGGTTTTCAAGCACTTCAAATCCCAATTTTTATTT
CTGAGCAATATCCTCAAGGGTTAGGAGAAACTTTAATGGATTTGAAATCTCTTCTCAGAGACCAATATTCTCCATGGGTG
AAAACGACTTTTTCTTGTTTGGATGACTCTATTATAAAAAAATATATCGAAAAATCTTACATTCAACAATGGGTCATTGT
CGGTCTTGAAGCTCATATTTGTATTTTGCAAACAGCTAAAGGGCTTTTGCAAGCTGGAAAGCAAGTCATTGTTTTAAATG
ATGCGATTGCATCTCGTTCTATCTATAATTTTTCTATTGCAATTGCCGAAATGAGAGATTTGGGAATTCGAATTAGTAGT
TCCGAAACAATTCTTTTTGAGTTGTTAAAAGATTCCAAACAACCCGAATTTAAATCAATTAGTCAAATGATTAAGTCTTG
TGAATGTTAA

Upstream 100 bases:

>100_bases
ATTAGGAAGCTTGGGATAACTTTTTCAAAAATCTATCCATTTGGATGATTCCCGAATTATTTTAATTTGGGTTTAAATAT
AAAAAAGTTTAGAAACTATT

Downstream 100 bases:

>100_bases
TGCTCAGATCTATTTTGTTAACTTTTTTGGTTCTTTATTTCTTGCAGATTTTCGGAGCTGAAAAAGAGGAAATTCAGAGG
GTCGTTCGCCGTATTGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Domain-Containing; Hydrolase; Isochorismatase Family Hydrolase; YcaC-Related Amidohydrolase; Amidohydrolase; Hydrolase Isochorismatase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase-Related Amidase; Isochorismatase; Nicotinamidase

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MILPINLERSQTALLIIDMQDKIFATVDHGVDVLKAIFKTIKGFQALQIPIFISEQYPQGLGETLMDLKSLLRDQYSPWV
KTTFSCLDDSIIKKYIEKSYIQQWVIVGLEAHICILQTAKGLLQAGKQVIVLNDAIASRSIYNFSIAIAEMRDLGIRISS
SETILFELLKDSKQPEFKSISQMIKSCEC

Sequences:

>Translated_189_residues
MILPINLERSQTALLIIDMQDKIFATVDHGVDVLKAIFKTIKGFQALQIPIFISEQYPQGLGETLMDLKSLLRDQYSPWV
KTTFSCLDDSIIKKYIEKSYIQQWVIVGLEAHICILQTAKGLLQAGKQVIVLNDAIASRSIYNFSIAIAEMRDLGIRISS
SETILFELLKDSKQPEFKSISQMIKSCEC
>Mature_189_residues
MILPINLERSQTALLIIDMQDKIFATVDHGVDVLKAIFKTIKGFQALQIPIFISEQYPQGLGETLMDLKSLLRDQYSPWV
KTTFSCLDDSIIKKYIEKSYIQQWVIVGLEAHICILQTAKGLLQAGKQVIVLNDAIASRSIYNFSIAIAEMRDLGIRISS
SETILFELLKDSKQPEFKSISQMIKSCEC

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=174, Percent_Identity=32.7586206896552, Blast_Score=103, Evalue=8e-23,
Organism=Homo sapiens, GI103471987, Length=181, Percent_Identity=31.4917127071823, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI13376007, Length=190, Percent_Identity=30, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17540156, Length=179, Percent_Identity=32.4022346368715, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21357489, Length=178, Percent_Identity=28.6516853932584, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19922924, Length=184, Percent_Identity=28.2608695652174, Blast_Score=88, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21361; Mature: 21361

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPINLERSQTALLIIDMQDKIFATVDHGVDVLKAIFKTIKGFQALQIPIFISEQYPQG
CEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCH
LGETLMDLKSLLRDQYSPWVKTTFSCLDDSIIKKYIEKSYIQQWVIVGLEAHICILQTAK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQAGKQVIVLNDAIASRSIYNFSIAIAEMRDLGIRISSSETILFELLKDSKQPEFKSI
HHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCCCHHHHH
SQMIKSCEC
HHHHHHCCC
>Mature Secondary Structure
MILPINLERSQTALLIIDMQDKIFATVDHGVDVLKAIFKTIKGFQALQIPIFISEQYPQG
CEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCH
LGETLMDLKSLLRDQYSPWVKTTFSCLDDSIIKKYIEKSYIQQWVIVGLEAHICILQTAK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQAGKQVIVLNDAIASRSIYNFSIAIAEMRDLGIRISSSETILFELLKDSKQPEFKSI
HHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCCCHHHHH
SQMIKSCEC
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA