Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446219

Identifier: 46446219

GI number: 46446219

Start: 719625

End: 721367

Strand: Direct

Name: 46446219

Synonym: pc0585

Alternate gene names: NA

Gene position: 719625-721367 (Clockwise)

Preceding gene: 46446218

Following gene: 46446220

Centisome position: 29.8

GC content: 35.97

Gene sequence:

>1743_bases
ATGTTAATGCTCAGATCTATTTTGTTAACTTTTTTGGTTCTTTATTTCTTGCAGATTTTCGGAGCTGAAAAAGAGGAAAT
TCAGAGGGTCGTTCGCCGTATTGAAGCTCATCTGCATATTCAAGATACCCCTTCCGCTTACTTTGAAGCTAAACAAGCGA
TAGCTTCTTATTCTAGTTCTCAAAGCATTCATGAAGTTTATATTAAGGCAACAGCGCGTTCTGGTTACGAAAAAGAAATG
CTTTGTGCTTGGCAAAACTATTTTAAGCAATTTCCAAATCAAATAGAAAATCGAGAATTAATAGAAGAAATGGCTTGGGG
GGTTTTAGGCAAGGCCGCTCAATCTCATTCATTAATTACTCGGCACCTTGCTTTATTGGCAGCTTTTTTCTGTAAGGATA
CTAAAGGAGTAGAAATTCTTTTTCAGGGCATGCAAGATTCAAATTATGCGATCAGAGCCTTTGCTGTGAAATTGTCCAGC
CATTTACACGATGACAAATTAATAAAATCAGTTAAAGAACTTTTTCGAAATGAGAAAGTTAGGTTAGTTAAACATGAAGT
GATCAAAGCAATTGGGAAAATGAAAATACTAGAATTAAAAGAAGAGTTAGAATTTTTAATTAGTTCAGAGCAAAGTCTTT
CCGAAGAAAAAGCCTTAGCTATCGAGTCTCTAGTTGCTTTATTGAATTCTTTAAAAAGAGAAGAAGTCGTTCGTTTAATT
CAAAGCGATCGAGTCGGTTTGCGTTTAGTGGCTTGTCAGGCTATTGCTCATTTTCAATCTCAACGGGATGTCGACCAATT
GTTAATCTTAACAAATGATTATCATCCCCAGGTGAAAATGGCTAGCTATCAAGCAATGGGCTTGCTTAAGTCGAAAGAGC
AAAATGATAGTGTTATAGAAGCTGCTCGAAAGGGAATAAAAGATGATCATTTTAAAGTTGCATTGTCTGCTGCCTGGTTA
TTATTGCTCTATCATCCAAACGAAGCTAAAGAAGTTTTTCAATGTTACTTATTAAGCGATAAACCCGAAGTCCGTTTGAC
GGCTTCAGCTGCTTTAGCTTTAGCAGGTAGAGCAGGTATAGATTTGGCTTCGCAATTTCTTGAAAATCATCAAGATCCCT
ATATCCGTCTCAATCTTGCTTGTGGATTAGTCAAACAAAGATGTTGTTTGAAACAAGCTGCTCAAGTCATCAAGCAAGTC
TTGCTTTCGCAAAAAGATAAGTTTTGTGAAATTGAGTGTGGAATATTTAAATCGATTGCAGGTTGTCATTATAGTCGATC
TGAAAAAATAACAGAAAATCCAGAAATGAATAATCAGCTTCTTCGTTTAGAGTTATTCAATATTCTATCGATTTTAAAAG
AACCTAATACACAAAATGCGATACGAGAATTTTTATCAGAAAGAAACTGGGGCATTACGGGTGCCGCTGCCGCCTTACTT
TTAACAGAAGGTGATGAAGAGTCTATTGAAGTGGTATTGGAACTTCTTAAAGACCCCTGCACCAAAGTACGAATACAGGC
CGCTTTAGTTTTATCAATATGGTCACACGAAGAAGATCCTATTCATGTTTTACAGGAAGAGTATTTAAATAGTGATCGGG
AAACAAAAGCAAAAATCTTAGAGGGCATTGGACGGATTGGATCTATGAAATCTATTCCATTTTTAATTGAAACTTTAAAA
GAACCTTCTCAAACGTTACGCTTAATTGCAGCAATGGCATTAATTCAATCCCTGAATAACTAA

Upstream 100 bases:

>100_bases
GAATTCGAATTAGTAGTTCCGAAACAATTCTTTTTGAGTTGTTAAAAGATTCCAAACAACCCGAATTTAAATCAATTAGT
CAAATGATTAAGTCTTGTGA

Downstream 100 bases:

>100_bases
ATTAATTCTAGTGCATTTAACATCCCTAGGGGAAATTTAAATGAATATCCGTTTATGGCATTTTGAAACCCTTACTTATT
ATTTACTAGAGGAATTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MLMLRSILLTFLVLYFLQIFGAEKEEIQRVVRRIEAHLHIQDTPSAYFEAKQAIASYSSSQSIHEVYIKATARSGYEKEM
LCAWQNYFKQFPNQIENRELIEEMAWGVLGKAAQSHSLITRHLALLAAFFCKDTKGVEILFQGMQDSNYAIRAFAVKLSS
HLHDDKLIKSVKELFRNEKVRLVKHEVIKAIGKMKILELKEELEFLISSEQSLSEEKALAIESLVALLNSLKREEVVRLI
QSDRVGLRLVACQAIAHFQSQRDVDQLLILTNDYHPQVKMASYQAMGLLKSKEQNDSVIEAARKGIKDDHFKVALSAAWL
LLLYHPNEAKEVFQCYLLSDKPEVRLTASAALALAGRAGIDLASQFLENHQDPYIRLNLACGLVKQRCCLKQAAQVIKQV
LLSQKDKFCEIECGIFKSIAGCHYSRSEKITENPEMNNQLLRLELFNILSILKEPNTQNAIREFLSERNWGITGAAAALL
LTEGDEESIEVVLELLKDPCTKVRIQAALVLSIWSHEEDPIHVLQEEYLNSDRETKAKILEGIGRIGSMKSIPFLIETLK
EPSQTLRLIAAMALIQSLNN

Sequences:

>Translated_580_residues
MLMLRSILLTFLVLYFLQIFGAEKEEIQRVVRRIEAHLHIQDTPSAYFEAKQAIASYSSSQSIHEVYIKATARSGYEKEM
LCAWQNYFKQFPNQIENRELIEEMAWGVLGKAAQSHSLITRHLALLAAFFCKDTKGVEILFQGMQDSNYAIRAFAVKLSS
HLHDDKLIKSVKELFRNEKVRLVKHEVIKAIGKMKILELKEELEFLISSEQSLSEEKALAIESLVALLNSLKREEVVRLI
QSDRVGLRLVACQAIAHFQSQRDVDQLLILTNDYHPQVKMASYQAMGLLKSKEQNDSVIEAARKGIKDDHFKVALSAAWL
LLLYHPNEAKEVFQCYLLSDKPEVRLTASAALALAGRAGIDLASQFLENHQDPYIRLNLACGLVKQRCCLKQAAQVIKQV
LLSQKDKFCEIECGIFKSIAGCHYSRSEKITENPEMNNQLLRLELFNILSILKEPNTQNAIREFLSERNWGITGAAAALL
LTEGDEESIEVVLELLKDPCTKVRIQAALVLSIWSHEEDPIHVLQEEYLNSDRETKAKILEGIGRIGSMKSIPFLIETLK
EPSQTLRLIAAMALIQSLNN
>Mature_580_residues
MLMLRSILLTFLVLYFLQIFGAEKEEIQRVVRRIEAHLHIQDTPSAYFEAKQAIASYSSSQSIHEVYIKATARSGYEKEM
LCAWQNYFKQFPNQIENRELIEEMAWGVLGKAAQSHSLITRHLALLAAFFCKDTKGVEILFQGMQDSNYAIRAFAVKLSS
HLHDDKLIKSVKELFRNEKVRLVKHEVIKAIGKMKILELKEELEFLISSEQSLSEEKALAIESLVALLNSLKREEVVRLI
QSDRVGLRLVACQAIAHFQSQRDVDQLLILTNDYHPQVKMASYQAMGLLKSKEQNDSVIEAARKGIKDDHFKVALSAAWL
LLLYHPNEAKEVFQCYLLSDKPEVRLTASAALALAGRAGIDLASQFLENHQDPYIRLNLACGLVKQRCCLKQAAQVIKQV
LLSQKDKFCEIECGIFKSIAGCHYSRSEKITENPEMNNQLLRLELFNILSILKEPNTQNAIREFLSERNWGITGAAAALL
LTEGDEESIEVVLELLKDPCTKVRIQAALVLSIWSHEEDPIHVLQEEYLNSDRETKAKILEGIGRIGSMKSIPFLIETLK
EPSQTLRLIAAMALIQSLNN

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65759; Mature: 65759

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMLRSILLTFLVLYFLQIFGAEKEEIQRVVRRIEAHLHIQDTPSAYFEAKQAIASYSSS
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCC
QSIHEVYIKATARSGYEKEMLCAWQNYFKQFPNQIENRELIEEMAWGVLGKAAQSHSLIT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLALLAAFFCKDTKGVEILFQGMQDSNYAIRAFAVKLSSHLHDDKLIKSVKELFRNEKV
HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
RLVKHEVIKAIGKMKILELKEELEFLISSEQSLSEEKALAIESLVALLNSLKREEVVRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSDRVGLRLVACQAIAHFQSQRDVDQLLILTNDYHPQVKMASYQAMGLLKSKEQNDSVIE
HCCCCCHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCEEHHHHHHHHHHHCCCCCHHHHH
AARKGIKDDHFKVALSAAWLLLLYHPNEAKEVFQCYLLSDKPEVRLTASAALALAGRAGI
HHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCH
DLASQFLENHQDPYIRLNLACGLVKQRCCLKQAAQVIKQVLLSQKDKFCEIECGIFKSIA
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
GCHYSRSEKITENPEMNNQLLRLELFNILSILKEPNTQNAIREFLSERNWGITGAAAALL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
LTEGDEESIEVVLELLKDPCTKVRIQAALVLSIWSHEEDPIHVLQEEYLNSDRETKAKIL
EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
EGIGRIGSMKSIPFLIETLKEPSQTLRLIAAMALIQSLNN
HHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLMLRSILLTFLVLYFLQIFGAEKEEIQRVVRRIEAHLHIQDTPSAYFEAKQAIASYSSS
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCC
QSIHEVYIKATARSGYEKEMLCAWQNYFKQFPNQIENRELIEEMAWGVLGKAAQSHSLIT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLALLAAFFCKDTKGVEILFQGMQDSNYAIRAFAVKLSSHLHDDKLIKSVKELFRNEKV
HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
RLVKHEVIKAIGKMKILELKEELEFLISSEQSLSEEKALAIESLVALLNSLKREEVVRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSDRVGLRLVACQAIAHFQSQRDVDQLLILTNDYHPQVKMASYQAMGLLKSKEQNDSVIE
HCCCCCHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCEEHHHHHHHHHHHCCCCCHHHHH
AARKGIKDDHFKVALSAAWLLLLYHPNEAKEVFQCYLLSDKPEVRLTASAALALAGRAGI
HHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCH
DLASQFLENHQDPYIRLNLACGLVKQRCCLKQAAQVIKQVLLSQKDKFCEIECGIFKSIA
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
GCHYSRSEKITENPEMNNQLLRLELFNILSILKEPNTQNAIREFLSERNWGITGAAAALL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
LTEGDEESIEVVLELLKDPCTKVRIQAALVLSIWSHEEDPIHVLQEEYLNSDRETKAKIL
EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
EGIGRIGSMKSIPFLIETLKEPSQTLRLIAAMALIQSLNN
HHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA