Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446213
Identifier: 46446213
GI number: 46446213
Start: 713169
End: 713774
Strand: Reverse
Name: 46446213
Synonym: pc0579
Alternate gene names: NA
Gene position: 713774-713169 (Counterclockwise)
Preceding gene: 46446215
Following gene: 46446211
Centisome position: 29.56
GC content: 36.3
Gene sequence:
>606_bases ATGATTCCTAATGCACTGGATCAACAATTAGCTGTACAAAATCCATCGACTGCCATGCAACAAATGAATAATTTCTTGCA AGATTCCAACCTTTCTTTAGAAGATAGGTTTGAGATTATGAATAATGTATTTATTAGCTGTATGCAAATTTTTGGAAGAG TCGAAGGAAAATTAAACCAACAAATTACTCGTCTCACGAACGAAGTGAGACACCTCCAAGATAATAACGAAAACTTGCAA CATCAACTTGAGGCTATAGAAGCTGAACAATACAAAGAGAAGTTAATAAAGGATTATCAAAATTCGGCTGGAATTATCAA CAATATTGTATTGGCAACGGGTCTTACTTTAAGTTTTATCAATCCTATAAATATGCCTGCATCTGTTTTGGCGCTTGGAG TGTCTCATCTTTATCAAAAATCTGAAGTTTCGAATGATCTACGCTTGTTAGAAGCATTTGAACAAGAATATCGAACCAAT CATCCTAATTGCTCACGATTAGAAGCGCTAAAATATGCTGATAATAAAGTGCGCGAAACGATTCAGGAGTTAGCGAACCT TGATACCCCTAATGCGGCTTCTGTTGATGGCTCCGACTATGCCTAA
Upstream 100 bases:
>100_bases TTAGTGTTCTTAATTGAATATGTTTACAGATTACTATTTAAATAGTACGCATATTTAATGATCAACAATAAAAATCATTT ATAAGTTAAGGAGAGCAATT
Downstream 100 bases:
>100_bases ATTGGCTTTTATTTTAAGAGGGAAAATTTCCCTCTTATTTTTTAACTCTCACGACACTGATGATTTATTAATTTTTATTG GTGAATAAAGCTTTTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MIPNALDQQLAVQNPSTAMQQMNNFLQDSNLSLEDRFEIMNNVFISCMQIFGRVEGKLNQQITRLTNEVRHLQDNNENLQ HQLEAIEAEQYKEKLIKDYQNSAGIINNIVLATGLTLSFINPINMPASVLALGVSHLYQKSEVSNDLRLLEAFEQEYRTN HPNCSRLEALKYADNKVRETIQELANLDTPNAASVDGSDYA
Sequences:
>Translated_201_residues MIPNALDQQLAVQNPSTAMQQMNNFLQDSNLSLEDRFEIMNNVFISCMQIFGRVEGKLNQQITRLTNEVRHLQDNNENLQ HQLEAIEAEQYKEKLIKDYQNSAGIINNIVLATGLTLSFINPINMPASVLALGVSHLYQKSEVSNDLRLLEAFEQEYRTN HPNCSRLEALKYADNKVRETIQELANLDTPNAASVDGSDYA >Mature_201_residues MIPNALDQQLAVQNPSTAMQQMNNFLQDSNLSLEDRFEIMNNVFISCMQIFGRVEGKLNQQITRLTNEVRHLQDNNENLQ HQLEAIEAEQYKEKLIKDYQNSAGIINNIVLATGLTLSFINPINMPASVLALGVSHLYQKSEVSNDLRLLEAFEQEYRTN HPNCSRLEALKYADNKVRETIQELANLDTPNAASVDGSDYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22770; Mature: 22770
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPNALDQQLAVQNPSTAMQQMNNFLQDSNLSLEDRFEIMNNVFISCMQIFGRVEGKLNQ CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QITRLTNEVRHLQDNNENLQHQLEAIEAEQYKEKLIKDYQNSAGIINNIVLATGLTLSFI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NPINMPASVLALGVSHLYQKSEVSNDLRLLEAFEQEYRTNHPNCSRLEALKYADNKVRET CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IQELANLDTPNAASVDGSDYA HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPNALDQQLAVQNPSTAMQQMNNFLQDSNLSLEDRFEIMNNVFISCMQIFGRVEGKLNQ CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QITRLTNEVRHLQDNNENLQHQLEAIEAEQYKEKLIKDYQNSAGIINNIVLATGLTLSFI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NPINMPASVLALGVSHLYQKSEVSNDLRLLEAFEQEYRTNHPNCSRLEALKYADNKVRET CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IQELANLDTPNAASVDGSDYA HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA