Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446215

Identifier: 46446215

GI number: 46446215

Start: 715059

End: 717281

Strand: Reverse

Name: 46446215

Synonym: pc0581

Alternate gene names: NA

Gene position: 717281-715059 (Counterclockwise)

Preceding gene: 46446222

Following gene: 46446213

Centisome position: 29.71

GC content: 37.29

Gene sequence:

>2223_bases
ATGTTAAAAAACAATGAATTGACAAAAAGTTGCTTTAATTTAAATGTTATGGACAGCTCAGATAAATCCCCCTCTAATCA
AAATGAATTAAAAAAACATAAAATGGCTATGGAAAGTAATATTGACTTCTATCATTACGATTTAGCTACCCCTGATGGCT
CGATCACAAACCTTAACCGAATTAATGAAAAAACTGCTGAAGCAACAGTATTTATCCAAAATATCTCTCCGCATTTTGTC
GGTTTCCAGATCGACCCCCATTTGATTTTGTTTAATATTAAAAGCACTCTTGCACAATTAGGTTTGGATGGAATTGGATT
AAATTTTGAATTAGACAAAAAGAACTTATGTGCTCAAGTCCATACTAAACTCAATGCGATCGGTCCTATTGCAATTGAAA
TGTTAAAATTATTAGAAATAGGAAGTTCACTCGGAAAATTATTTGCGGCTGATGAAAGACGTCGTGTGAGAGATCCGGAT
TATTTAAGTCGAATGTTTGGGCGATCTGATAGAAGAGGTAAGCCCCTTTTATCTTTAGGAGGTTTGCATGGAAGCAATGA
CCTTATTTTGGATAAATTAGATGGACGAACAATAGTTTATTTAACTCTTCAAAATGGACGCGTTACTTACGATCCTTCAA
TTACAGGATTCCTTCCGACTTTGGCAAAAGCCCTTGTAACAAACACTAAAATGCGCGACATGTTACGTTTACATCAAGAA
TGGAATCCAATGATGACTCGCAACGTTTCTGAAGATGAAATTTTGCTTGTCCGCACATTGCCGCTCCATATTCGTACAGT
ATTTGCTAGAGTTGTCGATAATCTTTTATCACCAGGTTATCATCACACTTCGGCCTCTATTCTTCAACCTGATACATTTG
CCTCTGGAGATATTTATGAATTATTTGGAAGTAGTAAAAGAGAAATCACCGATATTCCGTTAGAATTTTATACTTTAGAA
CCTTACCGTGAACATGTTTTTTTTTCAGATAGAGATCAACTACAAACGTGTTTGGAAGACAGCAAAACTCTGTTTGAAGC
TTTTTCGACTGCTCCCCAACCTGTTGAAAATAGAGCAGCCGTATTTATTGTAAAAGGGCAACAGCTAAAATCTTTGAAAG
AATCGGATTGGATTACAAGAGAAACAAGAACCCACGAATTTCCAGGAGCTTTTCATGGAACTCGTCAAGCTTTAATGGTC
GAGCGTTATATTGAACAACAGCCCTCTTACCCATTTCTTAAAGCAATTGACAGCGGTTTGATTACGAGCCAGGGAATACT
ATTAACTCGTTACTTCCCTTCTCCCTTAATGAAAAGGATGTTGTTAAGCGATCAAGTTCAAAGATGTTTAAAAGGAATTT
ACTTCCAATACCCCTCCTTATCCCATAAAGATTTTTTCTCTGCAGAAGATAGAGCTCTTCTGCATGACCTTGAAAAATTC
GCTATTCCCGTTTTTTGGGTGGATGAAGCGACAGGACAAATTTTGCAATACCTTCAAAAACCAGATCGCGATACAGGTTT
TTTTGTTCCTTTAGCTCACGTAGATATATTTTTAAAATCCACTGTTTTTGGGATTTATGGCTCAAATTTATTAGCTGGGG
ACTTTGAACAGGAGCTTCATCACTTGTTAGCTGGAGTCTTAGAAATGCGTACGGAAATGCAACATCCTTTACTCCATAAA
AATACTCCTTTAGCATTAGTCACGGGTGGAGGGCCTGGAGCGATGGAAGTTGGCAACAGGGTCGCAAAAGATCTACGTAT
TCTATCATGTGCTAATATCGCCGATTTTAGAGCTAAAGATGGATCTGTTGTTAATGAACAGCTTCAAAACCCTTTTGTCG
AAGCTAAAATGACTTACCGACTTGATAAATTAGTGGAAAGGCAGGCTGATTTTCATCTAGACTTTCCTATTTTTTTAATG
GGTGGGATCGGAACTGACTTTGAATTTTCTCTTGAGGAAGTGAGAAGAAAAGTGGGGTCGGTCAACTCCACACCCATTCT
TCTTTTTGGAGAACCTGATTATTGGCAACAAAAGCTGAGTTCTCGATTTGAGTGCAATCTTCATTCAGGAACAATCCAAG
GATCTGAATGGATCAGTAATTGTTACTATTGCATTCAAAAAGCTGAACAAGGCTTAAAAATTTATCGTGATTTTTTCTTA
GGAAAACTTCCGATTGGTAAAGGGGGGCCAATTTATGAGCAAGGATTTAAGGTTGTCATCTAA

Upstream 100 bases:

>100_bases
CCACAATTTTAAAAAGCTTAGAAGCAGACTTTAAGCTTTTATAGGCATACAAAATAGGAACAAAAATAAAAAATTTAGTT
GGGCAAGAAAATTAAATAGA

Downstream 100 bases:

>100_bases
TCCTTCAATTAAATTTGTCGGAACCTTTTAAAATTAAACTTTATAAGTTAATATGGCATATTTTAAATTTGGAGGTAAAT
GGTCGATCAAGTTAAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 740; Mature: 740

Protein sequence:

>740_residues
MLKNNELTKSCFNLNVMDSSDKSPSNQNELKKHKMAMESNIDFYHYDLATPDGSITNLNRINEKTAEATVFIQNISPHFV
GFQIDPHLILFNIKSTLAQLGLDGIGLNFELDKKNLCAQVHTKLNAIGPIAIEMLKLLEIGSSLGKLFAADERRRVRDPD
YLSRMFGRSDRRGKPLLSLGGLHGSNDLILDKLDGRTIVYLTLQNGRVTYDPSITGFLPTLAKALVTNTKMRDMLRLHQE
WNPMMTRNVSEDEILLVRTLPLHIRTVFARVVDNLLSPGYHHTSASILQPDTFASGDIYELFGSSKREITDIPLEFYTLE
PYREHVFFSDRDQLQTCLEDSKTLFEAFSTAPQPVENRAAVFIVKGQQLKSLKESDWITRETRTHEFPGAFHGTRQALMV
ERYIEQQPSYPFLKAIDSGLITSQGILLTRYFPSPLMKRMLLSDQVQRCLKGIYFQYPSLSHKDFFSAEDRALLHDLEKF
AIPVFWVDEATGQILQYLQKPDRDTGFFVPLAHVDIFLKSTVFGIYGSNLLAGDFEQELHHLLAGVLEMRTEMQHPLLHK
NTPLALVTGGGPGAMEVGNRVAKDLRILSCANIADFRAKDGSVVNEQLQNPFVEAKMTYRLDKLVERQADFHLDFPIFLM
GGIGTDFEFSLEEVRRKVGSVNSTPILLFGEPDYWQQKLSSRFECNLHSGTIQGSEWISNCYYCIQKAEQGLKIYRDFFL
GKLPIGKGGPIYEQGFKVVI

Sequences:

>Translated_740_residues
MLKNNELTKSCFNLNVMDSSDKSPSNQNELKKHKMAMESNIDFYHYDLATPDGSITNLNRINEKTAEATVFIQNISPHFV
GFQIDPHLILFNIKSTLAQLGLDGIGLNFELDKKNLCAQVHTKLNAIGPIAIEMLKLLEIGSSLGKLFAADERRRVRDPD
YLSRMFGRSDRRGKPLLSLGGLHGSNDLILDKLDGRTIVYLTLQNGRVTYDPSITGFLPTLAKALVTNTKMRDMLRLHQE
WNPMMTRNVSEDEILLVRTLPLHIRTVFARVVDNLLSPGYHHTSASILQPDTFASGDIYELFGSSKREITDIPLEFYTLE
PYREHVFFSDRDQLQTCLEDSKTLFEAFSTAPQPVENRAAVFIVKGQQLKSLKESDWITRETRTHEFPGAFHGTRQALMV
ERYIEQQPSYPFLKAIDSGLITSQGILLTRYFPSPLMKRMLLSDQVQRCLKGIYFQYPSLSHKDFFSAEDRALLHDLEKF
AIPVFWVDEATGQILQYLQKPDRDTGFFVPLAHVDIFLKSTVFGIYGSNLLAGDFEQELHHLLAGVLEMRTEMQHPLLHK
NTPLALVTGGGPGAMEVGNRVAKDLRILSCANIADFRAKDGSVVNEQLQNPFVEAKMTYRLDKLVERQADFHLDFPIFLM
GGIGTDFEFSLEEVRRKVGSVNSTPILLFGEPDYWQQKLSSRFECNLHSGTIQGSEWISNCYYCIQKAEQGLKIYRDFFL
GKLPIGKGGPIYEQGFKVVI
>Mature_740_residues
MLKNNELTKSCFNLNVMDSSDKSPSNQNELKKHKMAMESNIDFYHYDLATPDGSITNLNRINEKTAEATVFIQNISPHFV
GFQIDPHLILFNIKSTLAQLGLDGIGLNFELDKKNLCAQVHTKLNAIGPIAIEMLKLLEIGSSLGKLFAADERRRVRDPD
YLSRMFGRSDRRGKPLLSLGGLHGSNDLILDKLDGRTIVYLTLQNGRVTYDPSITGFLPTLAKALVTNTKMRDMLRLHQE
WNPMMTRNVSEDEILLVRTLPLHIRTVFARVVDNLLSPGYHHTSASILQPDTFASGDIYELFGSSKREITDIPLEFYTLE
PYREHVFFSDRDQLQTCLEDSKTLFEAFSTAPQPVENRAAVFIVKGQQLKSLKESDWITRETRTHEFPGAFHGTRQALMV
ERYIEQQPSYPFLKAIDSGLITSQGILLTRYFPSPLMKRMLLSDQVQRCLKGIYFQYPSLSHKDFFSAEDRALLHDLEKF
AIPVFWVDEATGQILQYLQKPDRDTGFFVPLAHVDIFLKSTVFGIYGSNLLAGDFEQELHHLLAGVLEMRTEMQHPLLHK
NTPLALVTGGGPGAMEVGNRVAKDLRILSCANIADFRAKDGSVVNEQLQNPFVEAKMTYRLDKLVERQADFHLDFPIFLM
GGIGTDFEFSLEEVRRKVGSVNSTPILLFGEPDYWQQKLSSRFECNLHSGTIQGSEWISNCYYCIQKAEQGLKIYRDFFL
GKLPIGKGGPIYEQGFKVVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83970; Mature: 83970

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNNELTKSCFNLNVMDSSDKSPSNQNELKKHKMAMESNIDFYHYDLATPDGSITNLNR
CCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH
INEKTAEATVFIQNISPHFVGFQIDPHLILFNIKSTLAQLGLDGIGLNFELDKKNLCAQV
HHHHHCCEEEEEEECCCCEEEEEECCCEEEEEHHHHHHHCCCCCCCCEEEECHHHHHHHH
HTKLNAIGPIAIEMLKLLEIGSSLGKLFAADERRRVRDPDYLSRMFGRSDRRGKPLLSLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCEEEC
GLHGSNDLILDKLDGRTIVYLTLQNGRVTYDPSITGFLPTLAKALVTNTKMRDMLRLHQE
CCCCCCCEEEEECCCCEEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WNPMMTRNVSEDEILLVRTLPLHIRTVFARVVDNLLSPGYHHTSASILQPDTFASGDIYE
CCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
LFGSSKREITDIPLEFYTLEPYREHVFFSDRDQLQTCLEDSKTLFEAFSTAPQPVENRAA
HHCCCCCEEEECCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VFIVKGQQLKSLKESDWITRETRTHEFPGAFHGTRQALMVERYIEQQPSYPFLKAIDSGL
EEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
ITSQGILLTRYFPSPLMKRMLLSDQVQRCLKGIYFQYPSLSHKDFFSAEDRALLHDLEKF
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AIPVFWVDEATGQILQYLQKPDRDTGFFVPLAHVDIFLKSTVFGIYGSNLLAGDFEQELH
CEEEEEECHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
HLLAGVLEMRTEMQHPLLHKNTPLALVTGGGPGAMEVGNRVAKDLRILSCANIADFRAKD
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCC
GSVVNEQLQNPFVEAKMTYRLDKLVERQADFHLDFPIFLMGGIGTDFEFSLEEVRRKVGS
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCHHHHHHHHHHCC
VNSTPILLFGEPDYWQQKLSSRFECNLHSGTIQGSEWISNCYYCIQKAEQGLKIYRDFFL
CCCCEEEEECCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKLPIGKGGPIYEQGFKVVI
CCCCCCCCCCHHHCCCEEEC
>Mature Secondary Structure
MLKNNELTKSCFNLNVMDSSDKSPSNQNELKKHKMAMESNIDFYHYDLATPDGSITNLNR
CCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH
INEKTAEATVFIQNISPHFVGFQIDPHLILFNIKSTLAQLGLDGIGLNFELDKKNLCAQV
HHHHHCCEEEEEEECCCCEEEEEECCCEEEEEHHHHHHHCCCCCCCCEEEECHHHHHHHH
HTKLNAIGPIAIEMLKLLEIGSSLGKLFAADERRRVRDPDYLSRMFGRSDRRGKPLLSLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCEEEC
GLHGSNDLILDKLDGRTIVYLTLQNGRVTYDPSITGFLPTLAKALVTNTKMRDMLRLHQE
CCCCCCCEEEEECCCCEEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WNPMMTRNVSEDEILLVRTLPLHIRTVFARVVDNLLSPGYHHTSASILQPDTFASGDIYE
CCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
LFGSSKREITDIPLEFYTLEPYREHVFFSDRDQLQTCLEDSKTLFEAFSTAPQPVENRAA
HHCCCCCEEEECCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VFIVKGQQLKSLKESDWITRETRTHEFPGAFHGTRQALMVERYIEQQPSYPFLKAIDSGL
EEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
ITSQGILLTRYFPSPLMKRMLLSDQVQRCLKGIYFQYPSLSHKDFFSAEDRALLHDLEKF
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AIPVFWVDEATGQILQYLQKPDRDTGFFVPLAHVDIFLKSTVFGIYGSNLLAGDFEQELH
CEEEEEECHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
HLLAGVLEMRTEMQHPLLHKNTPLALVTGGGPGAMEVGNRVAKDLRILSCANIADFRAKD
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCC
GSVVNEQLQNPFVEAKMTYRLDKLVERQADFHLDFPIFLMGGIGTDFEFSLEEVRRKVGS
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCHHHHHHHHHHCC
VNSTPILLFGEPDYWQQKLSSRFECNLHSGTIQGSEWISNCYYCIQKAEQGLKIYRDFFL
CCCCEEEEECCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKLPIGKGGPIYEQGFKVVI
CCCCCCCCCCHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA