Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446211

Identifier: 46446211

GI number: 46446211

Start: 711124

End: 711729

Strand: Reverse

Name: 46446211

Synonym: pc0577

Alternate gene names: NA

Gene position: 711729-711124 (Counterclockwise)

Preceding gene: 46446213

Following gene: 46446207

Centisome position: 29.48

GC content: 36.14

Gene sequence:

>606_bases
ATGATTCCTAATGTACCGGATCAACAATTAGCTGTACAAAATCCTTCAACTGCCATGCAACAAATGAATAATTTCTTGCA
AGACTCCAGCCTTCCTTTAGAAGATAGAATGGTAATGATGGGCCATGCTTGTAGTGAAATGTTCCGATTTATTGAAATTC
GCGGAAGATTATTAAACCAACAAATTACCCATCTCACTAACGAAGTAAGACACCTCCAAGATAATAATGAAAACCTGCAA
CATCAACTTGAGGCTATAGAAGCTGAACAATACAAAGAAAATTTAATAAAAGATTACCAAAATTCAGCTGGAATTATTAA
CAATATTGTATTGGCAACGGGTCTTACTTTAAGTTTTATTAATCCTATAAATACGCCTGCATCTGTTTTGGCGCTTGGAA
TGTCTCATCTTTATCAAAAATCTGAAGTTTCAAATCATTTACGCTTGTTAGAAGCATTTGAACAAGAATATCGAACCAAC
CATCCCAATTGCTCACGATTAGAAGCGCTAAAATATGCTGATAATAAAGTGCGCGAAACGATTCAGGAGTTAGCAAACCT
TGATACCCCTAATGCGGCTTCTGTTGATGGCTCAGACTATGCCTAA

Upstream 100 bases:

>100_bases
TTAGTGTTCTTAATTGAATATGTTTACAGATTACTATTTAAATAGTATGCATATTTGATGATAAACAATAAAAATCATTT
ATAAGTTAAGGAGAGCAATT

Downstream 100 bases:

>100_bases
ATTGGTTTTTATTTTAAGAGGGAAAATTTCCCTCTTATTTTTTAACTCTCACGACACTAATGTCTATTAATTTTTATTGA
TGAATAAAGCTTTTATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MIPNVPDQQLAVQNPSTAMQQMNNFLQDSSLPLEDRMVMMGHACSEMFRFIEIRGRLLNQQITHLTNEVRHLQDNNENLQ
HQLEAIEAEQYKENLIKDYQNSAGIINNIVLATGLTLSFINPINTPASVLALGMSHLYQKSEVSNHLRLLEAFEQEYRTN
HPNCSRLEALKYADNKVRETIQELANLDTPNAASVDGSDYA

Sequences:

>Translated_201_residues
MIPNVPDQQLAVQNPSTAMQQMNNFLQDSSLPLEDRMVMMGHACSEMFRFIEIRGRLLNQQITHLTNEVRHLQDNNENLQ
HQLEAIEAEQYKENLIKDYQNSAGIINNIVLATGLTLSFINPINTPASVLALGMSHLYQKSEVSNHLRLLEAFEQEYRTN
HPNCSRLEALKYADNKVRETIQELANLDTPNAASVDGSDYA
>Mature_201_residues
MIPNVPDQQLAVQNPSTAMQQMNNFLQDSSLPLEDRMVMMGHACSEMFRFIEIRGRLLNQQITHLTNEVRHLQDNNENLQ
HQLEAIEAEQYKENLIKDYQNSAGIINNIVLATGLTLSFINPINTPASVLALGMSHLYQKSEVSNHLRLLEAFEQEYRTN
HPNCSRLEALKYADNKVRETIQELANLDTPNAASVDGSDYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22808; Mature: 22808

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPNVPDQQLAVQNPSTAMQQMNNFLQDSSLPLEDRMVMMGHACSEMFRFIEIRGRLLNQ
CCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QITHLTNEVRHLQDNNENLQHQLEAIEAEQYKENLIKDYQNSAGIINNIVLATGLTLSFI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NPINTPASVLALGMSHLYQKSEVSNHLRLLEAFEQEYRTNHPNCSRLEALKYADNKVRET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IQELANLDTPNAASVDGSDYA
HHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPNVPDQQLAVQNPSTAMQQMNNFLQDSSLPLEDRMVMMGHACSEMFRFIEIRGRLLNQ
CCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QITHLTNEVRHLQDNNENLQHQLEAIEAEQYKENLIKDYQNSAGIINNIVLATGLTLSFI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NPINTPASVLALGMSHLYQKSEVSNHLRLLEAFEQEYRTNHPNCSRLEALKYADNKVRET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IQELANLDTPNAASVDGSDYA
HHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA