Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446179

Identifier: 46446179

GI number: 46446179

Start: 678519

End: 679436

Strand: Direct

Name: 46446179

Synonym: pc0545

Alternate gene names: NA

Gene position: 678519-679436 (Clockwise)

Preceding gene: 46446177

Following gene: 46446180

Centisome position: 28.1

GC content: 33.44

Gene sequence:

>918_bases
TTGCATATTTCTCTTTTCAAAGATTGCTACTTAATCGCTCTTTACTCATTTTATATTCGAATACATAAAATAAGCATCTT
TAAATTTTATAACGGTTACCATTTTATCATGAAATTTACCAATTGTATTTCTTATTTTTTAGCAATTTTTTTATTAATGA
CTATTTATAATTTCGCAGAATCAGAGAAGGGAGAAATTAATAATGGACAAGATTTCACAAAACCTTTACCGAGATTAGTT
GTATGTTGTAAATATCAAGATATCAGCGAATTTTCCAGAGCGCAAACATTTACTTTGCGAGCAGATAAGCCTTTCAATTT
GAATGAGCATTGGGTTGTATCTACTCGCGTTGATCTTCCTTATACTGATATTCGCATCAAAAAACTCGTAGGATATCGTT
ACACGATTCTTTCTCCAAAAAAACATGAAAGGGGATTATCCGATCTTTCATTTCAAGCATTATTTATTACTCCCACTTAC
GGGAAATGGACATTTGCTTTTGGATTAAAGCTGTGTTTTCCGACTGCGCAAGGGAAAAACTTAGGTTCAGGCAAATATCA
AATGCTTCCAACTTTTTCGTTTAAATATGATTTGAAAAATTGGATAAACGGGGCCTGGTGCGCACTTCTCGTACGACAAG
ACTTTGATATAGGGGGAGCTAGATCACGTCGTTCAATTAATCAAACTTGTCTTGAACCTATATTCAACATTGATTTACCT
TATAGCTGGTTTGTTACGCTTGCCCCAAAAATTCGGTATAATTGGAAGCATCGAACTTGGTTTGTTCCTTTTGACATTCA
AATAGGCAAAATGCTGACTGAAAAAATGGTTTTATCGCTCGAATATAAAAAACGTCTTGTCGACAATTTCCCTGTTTTTC
GGCAAGAAATTGAATTACGATTAGGATATTTCTTTTAA

Upstream 100 bases:

>100_bases
GTTTTTAAGTTTTATAATTTATAACATTTAACCATTTTTTTATTTATAAATCAGCGAAATCTTATGATTTTATCAGATGT
GACTTGGTTGTTTTACCTTT

Downstream 100 bases:

>100_bases
TCGATTTAAAATAAAAAAACATTTATAAGTCAAAGTAGATAGTTTGCGATTTTGCTTTTTTCTTAATTGTAAACTAATCT
GCCATAAAATTTTATTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MHISLFKDCYLIALYSFYIRIHKISIFKFYNGYHFIMKFTNCISYFLAIFLLMTIYNFAESEKGEINNGQDFTKPLPRLV
VCCKYQDISEFSRAQTFTLRADKPFNLNEHWVVSTRVDLPYTDIRIKKLVGYRYTILSPKKHERGLSDLSFQALFITPTY
GKWTFAFGLKLCFPTAQGKNLGSGKYQMLPTFSFKYDLKNWINGAWCALLVRQDFDIGGARSRRSINQTCLEPIFNIDLP
YSWFVTLAPKIRYNWKHRTWFVPFDIQIGKMLTEKMVLSLEYKKRLVDNFPVFRQEIELRLGYFF

Sequences:

>Translated_305_residues
MHISLFKDCYLIALYSFYIRIHKISIFKFYNGYHFIMKFTNCISYFLAIFLLMTIYNFAESEKGEINNGQDFTKPLPRLV
VCCKYQDISEFSRAQTFTLRADKPFNLNEHWVVSTRVDLPYTDIRIKKLVGYRYTILSPKKHERGLSDLSFQALFITPTY
GKWTFAFGLKLCFPTAQGKNLGSGKYQMLPTFSFKYDLKNWINGAWCALLVRQDFDIGGARSRRSINQTCLEPIFNIDLP
YSWFVTLAPKIRYNWKHRTWFVPFDIQIGKMLTEKMVLSLEYKKRLVDNFPVFRQEIELRLGYFF
>Mature_305_residues
MHISLFKDCYLIALYSFYIRIHKISIFKFYNGYHFIMKFTNCISYFLAIFLLMTIYNFAESEKGEINNGQDFTKPLPRLV
VCCKYQDISEFSRAQTFTLRADKPFNLNEHWVVSTRVDLPYTDIRIKKLVGYRYTILSPKKHERGLSDLSFQALFITPTY
GKWTFAFGLKLCFPTAQGKNLGSGKYQMLPTFSFKYDLKNWINGAWCALLVRQDFDIGGARSRRSINQTCLEPIFNIDLP
YSWFVTLAPKIRYNWKHRTWFVPFDIQIGKMLTEKMVLSLEYKKRLVDNFPVFRQEIELRLGYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36196; Mature: 36196

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISLFKDCYLIALYSFYIRIHKISIFKFYNGYHFIMKFTNCISYFLAIFLLMTIYNFAE
CCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SEKGEINNGQDFTKPLPRLVVCCKYQDISEFSRAQTFTLRADKPFNLNEHWVVSTRVDLP
CCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHCEEEEEECCCCCCCCCCEEEEEEECCC
YTDIRIKKLVGYRYTILSPKKHERGLSDLSFQALFITPTYGKWTFAFGLKLCFPTAQGKN
CCHHHHHHHHCEEEEEECCCHHHCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCC
LGSGKYQMLPTFSFKYDLKNWINGAWCALLVRQDFDIGGARSRRSINQTCLEPIFNIDLP
CCCCCEEEEEEEEEEECHHHHCCHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
YSWFVTLAPKIRYNWKHRTWFVPFDIQIGKMLTEKMVLSLEYKKRLVDNFPVFRQEIELR
CEEEEEECCEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHE
LGYFF
ECCCC
>Mature Secondary Structure
MHISLFKDCYLIALYSFYIRIHKISIFKFYNGYHFIMKFTNCISYFLAIFLLMTIYNFAE
CCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SEKGEINNGQDFTKPLPRLVVCCKYQDISEFSRAQTFTLRADKPFNLNEHWVVSTRVDLP
CCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHCEEEEEECCCCCCCCCCEEEEEEECCC
YTDIRIKKLVGYRYTILSPKKHERGLSDLSFQALFITPTYGKWTFAFGLKLCFPTAQGKN
CCHHHHHHHHCEEEEEECCCHHHCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCC
LGSGKYQMLPTFSFKYDLKNWINGAWCALLVRQDFDIGGARSRRSINQTCLEPIFNIDLP
CCCCCEEEEEEEEEEECHHHHCCHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
YSWFVTLAPKIRYNWKHRTWFVPFDIQIGKMLTEKMVLSLEYKKRLVDNFPVFRQEIELR
CEEEEEECCEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHE
LGYFF
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA