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The map label for this gene is 45659292

Identifier: 45659292

GI number: 45659292

Start: 4251001

End: 4252575

Strand: Reverse

Name: 45659292

Synonym: LIC13477

Alternate gene names: NA

Gene position: 4252575-4251001 (Counterclockwise)

Preceding gene: 45659293

Following gene: 45659285

Centisome position: 99.42

GC content: 36.13

Gene sequence:

>1575_bases
GTGTCTGACAACCTTTTAAAAAAGGCTTATCTATTCTATTTCCTTGTGTTGATTTTATTTCCATCTTTGCTTTTTTCTCA
AGAAATTGAGGAAAAAACAAAACTCGATTTTCAAGGAAATTACAGAGTGAGAGGATTTAATCTTGGAAGAGATATTTATA
CATCTCGTCAAACTGCGGCGACTCCTTATGATAAAAACACTTTTAAAACCGAAGAAGAACAAAGAAACCAAGCTGCCGTC
GATACTGAGATTGCGGAAAGATTAAAAGGAAATCCAAGTACTTTATCTCCTCGCAAGGAAGACATTTCATATTTCGATAC
AAGAATGACGGTCAACATGAACTTTAATACTTCAAAATATTTTGAAGCTCTTTGGGGTGTTCAAGTTGGTGATATTACTT
TCGGAGGAAAAGGTTTTGGTCAAAACTCTACAACTGGTCCGGGACAAGGAGGTGAAGCAGGTTTCACTTCTCCTGTAAAT
ATACAAACTACATTTTTATATTTGAATTTTAAACTTCCGGAAGACGCTTTCAGTTTGAGGGTTGGTCAGCAACTTTTTTC
TTCTCCGAGAGGAAGGGTTGTTTTTACTCCTGGAACGGGTGTTACAGTCAATAAGGACTTTCGTTTATGGAATACTACAA
TTGAAGCGGGTTGGTTTGTAGCGAGACAGAACGCTCAACTTGATTTAGATAAGAACACATACGCAGATAAAAATTATGTC
GGCACTAATATTTATTTTTACGAAATCAAAACAAGTTTTTTAAACAATATAAAACACGAACTCTATTCTTATTTTTTAGA
TGATACGATCAAATCTATAGACAAGACGACTAACGTAAGGGGGGCTGTGATTGCTTTGGATAGTGAAGTTGGTCAATTGT
TTTGGCATGGACTTATGAACGAAATTAATCTTTCTAATTTTGGATTTGTAATTCACGGGATTTACAATCATGGAACCGTG
CAGACTTTGGATCCGTATCGAGATGGTATCGGAAATATTTTATATAATCGATACAACAAACATACTATATCCGGTGGAAT
GGTCGATCTTCAGTTTTCTTATCGTTATAGTGAAAATCTTACCTTTAACTTGGTGGGTGTAGGTAGTACAGGTCGTCCCG
GTTTTGATAAAGACGGAAACAGAGCGAACCTAAAAGGTGGCGGTTATAAAACTTTAATGCCCGGTTATTCTATATCAAAC
ATAGCAAACGACTTTACAGGTGGTTACGCGCTTTTTTCTGGAAAAGATTCAAGCGGTTTATATGAGTATGGAATCAACGG
TGATTTTGTAGTTTATGGTCCGTTACTTTTGACTTTGGGTTATTATCGGTTGTATGGAACTAAGTCCCCTTTTATTGAAA
ACAATCGTTACTTCAATTATGAGAATGGATATAAAACGAGCGCTTTTTTCGGGCACGAAGTCAATGTAAACTTAAGATGG
AATGCATTTCGAGATATGCAAATTTTAATGAGGTCCGGTTACTTTGTTGCCGGAGACGGTTTAAAGGCTTATTTAGATAC
AACTCAGGGAAAAATTCTCAGAGAATTTTTTGTAACCGCCGAACACAGATTTTAA

Upstream 100 bases:

>100_bases
GGATAATTTAAATTTCTTTATTAAAGAATTGAAACGAACCGGTGTTTTAGACGATTTAAGAAACCGATATTTTAATCAGA
ACAACTGGGTAAAATGATCC

Downstream 100 bases:

>100_bases
ATTTAATTGTTTGTTTTAAAGTTTTTAGTATATAATAAATTTAGAATATTTTTTATTAAATAACGTGAGTTCGGCGTAAG
AAAAAATTCTAAAAATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MSDNLLKKAYLFYFLVLILFPSLLFSQEIEEKTKLDFQGNYRVRGFNLGRDIYTSRQTAATPYDKNTFKTEEEQRNQAAV
DTEIAERLKGNPSTLSPRKEDISYFDTRMTVNMNFNTSKYFEALWGVQVGDITFGGKGFGQNSTTGPGQGGEAGFTSPVN
IQTTFLYLNFKLPEDAFSLRVGQQLFSSPRGRVVFTPGTGVTVNKDFRLWNTTIEAGWFVARQNAQLDLDKNTYADKNYV
GTNIYFYEIKTSFLNNIKHELYSYFLDDTIKSIDKTTNVRGAVIALDSEVGQLFWHGLMNEINLSNFGFVIHGIYNHGTV
QTLDPYRDGIGNILYNRYNKHTISGGMVDLQFSYRYSENLTFNLVGVGSTGRPGFDKDGNRANLKGGGYKTLMPGYSISN
IANDFTGGYALFSGKDSSGLYEYGINGDFVVYGPLLLTLGYYRLYGTKSPFIENNRYFNYENGYKTSAFFGHEVNVNLRW
NAFRDMQILMRSGYFVAGDGLKAYLDTTQGKILREFFVTAEHRF

Sequences:

>Translated_524_residues
MSDNLLKKAYLFYFLVLILFPSLLFSQEIEEKTKLDFQGNYRVRGFNLGRDIYTSRQTAATPYDKNTFKTEEEQRNQAAV
DTEIAERLKGNPSTLSPRKEDISYFDTRMTVNMNFNTSKYFEALWGVQVGDITFGGKGFGQNSTTGPGQGGEAGFTSPVN
IQTTFLYLNFKLPEDAFSLRVGQQLFSSPRGRVVFTPGTGVTVNKDFRLWNTTIEAGWFVARQNAQLDLDKNTYADKNYV
GTNIYFYEIKTSFLNNIKHELYSYFLDDTIKSIDKTTNVRGAVIALDSEVGQLFWHGLMNEINLSNFGFVIHGIYNHGTV
QTLDPYRDGIGNILYNRYNKHTISGGMVDLQFSYRYSENLTFNLVGVGSTGRPGFDKDGNRANLKGGGYKTLMPGYSISN
IANDFTGGYALFSGKDSSGLYEYGINGDFVVYGPLLLTLGYYRLYGTKSPFIENNRYFNYENGYKTSAFFGHEVNVNLRW
NAFRDMQILMRSGYFVAGDGLKAYLDTTQGKILREFFVTAEHRF
>Mature_523_residues
SDNLLKKAYLFYFLVLILFPSLLFSQEIEEKTKLDFQGNYRVRGFNLGRDIYTSRQTAATPYDKNTFKTEEEQRNQAAVD
TEIAERLKGNPSTLSPRKEDISYFDTRMTVNMNFNTSKYFEALWGVQVGDITFGGKGFGQNSTTGPGQGGEAGFTSPVNI
QTTFLYLNFKLPEDAFSLRVGQQLFSSPRGRVVFTPGTGVTVNKDFRLWNTTIEAGWFVARQNAQLDLDKNTYADKNYVG
TNIYFYEIKTSFLNNIKHELYSYFLDDTIKSIDKTTNVRGAVIALDSEVGQLFWHGLMNEINLSNFGFVIHGIYNHGTVQ
TLDPYRDGIGNILYNRYNKHTISGGMVDLQFSYRYSENLTFNLVGVGSTGRPGFDKDGNRANLKGGGYKTLMPGYSISNI
ANDFTGGYALFSGKDSSGLYEYGINGDFVVYGPLLLTLGYYRLYGTKSPFIENNRYFNYENGYKTSAFFGHEVNVNLRWN
AFRDMQILMRSGYFVAGDGLKAYLDTTQGKILREFFVTAEHRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59409; Mature: 59278

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLLKKAYLFYFLVLILFPSLLFSQEIEEKTKLDFQGNYRVRGFNLGRDIYTSRQTAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCCCCC
TPYDKNTFKTEEEQRNQAAVDTEIAERLKGNPSTLSPRKEDISYFDTRMTVNMNFNTSKY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEEEEECCCHHHH
FEALWGVQVGDITFGGKGFGQNSTTGPGQGGEAGFTSPVNIQTTFLYLNFKLPEDAFSLR
HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHH
VGQQLFSSPRGRVVFTPGTGVTVNKDFRLWNTTIEAGWFVARQNAQLDLDKNTYADKNYV
HHHHHHCCCCCCEEECCCCCEEECCCCEEEEEEEECCEEEEECCCEEEECCCCCCCCCEE
GTNIYFYEIKTSFLNNIKHELYSYFLDDTIKSIDKTTNVRGAVIALDSEVGQLFWHGLMN
CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
EINLSNFGFVIHGIYNHGTVQTLDPYRDGIGNILYNRYNKHTISGGMVDLQFSYRYSENL
HCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEECCCC
TFNLVGVGSTGRPGFDKDGNRANLKGGGYKTLMPGYSISNIANDFTGGYALFSGKDSSGL
EEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCCC
YEYGINGDFVVYGPLLLTLGYYRLYGTKSPFIENNRYFNYENGYKTSAFFGHEVNVNLRW
EEECCCCCEEEECHHHHHHHHHEEECCCCCCCCCCCEECCCCCEEEEEEECEEEEEEEEE
NAFRDMQILMRSGYFVAGDGLKAYLDTTQGKILREFFVTAEHRF
CCHHHHHHHHHCCCEEECCCCEEEEECHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDNLLKKAYLFYFLVLILFPSLLFSQEIEEKTKLDFQGNYRVRGFNLGRDIYTSRQTAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCCCCC
TPYDKNTFKTEEEQRNQAAVDTEIAERLKGNPSTLSPRKEDISYFDTRMTVNMNFNTSKY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEEEEECCCHHHH
FEALWGVQVGDITFGGKGFGQNSTTGPGQGGEAGFTSPVNIQTTFLYLNFKLPEDAFSLR
HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHH
VGQQLFSSPRGRVVFTPGTGVTVNKDFRLWNTTIEAGWFVARQNAQLDLDKNTYADKNYV
HHHHHHCCCCCCEEECCCCCEEECCCCEEEEEEEECCEEEEECCCEEEECCCCCCCCCEE
GTNIYFYEIKTSFLNNIKHELYSYFLDDTIKSIDKTTNVRGAVIALDSEVGQLFWHGLMN
CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
EINLSNFGFVIHGIYNHGTVQTLDPYRDGIGNILYNRYNKHTISGGMVDLQFSYRYSENL
HCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEECCCC
TFNLVGVGSTGRPGFDKDGNRANLKGGGYKTLMPGYSISNIANDFTGGYALFSGKDSSGL
EEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCCC
YEYGINGDFVVYGPLLLTLGYYRLYGTKSPFIENNRYFNYENGYKTSAFFGHEVNVNLRW
EEECCCCCEEEECHHHHHHHHHEEECCCCCCCCCCCEECCCCCEEEEEEECEEEEEEEEE
NAFRDMQILMRSGYFVAGDGLKAYLDTTQGKILREFFVTAEHRF
CCHHHHHHHHHCCCEEECCCCEEEEECHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA