Click here to switch to the map view.

The map label for this gene is 45657725

Identifier: 45657725

GI number: 45657725

Start: 2256349

End: 2257548

Strand: Reverse

Name: 45657725

Synonym: LIC11862

Alternate gene names: NA

Gene position: 2257548-2256349 (Counterclockwise)

Preceding gene: 45657726

Following gene: 45657724

Centisome position: 52.78

GC content: 32.5

Gene sequence:

>1200_bases
ATGCGATTAGAACAAAAACTAAAAAGATGGGTAAGTGCGGGATTGATCGCTTCCGAACAATCAGAGGCGATTTTAAATTT
CGAAGAAAACCGAAAATCTTCATATTTATACTATTCGTTCCTCATTTTAGGAGTAGTAATCATCGGTATTGGCGTCCTTG
CGATTATTGCGGCTAACTGGGAAGAGCTTGATGATCTTGTAAAATTGGGATTTAGTTTTATCGTTCTTACTTTTGTCGCA
GGACTAAGTTTTTGGAAACGGGAAAATCCGAATCTATTTACAGTTTTTATAGTTCTATATTCAATTTTGATTTTAGGAAT
GATTGGATTGATTTCTCAGGTTTACAATTTAGAAGGAGAGTATTATCAAGCAGCGATGCTTTGGTGTATACTCAGTTGTT
TGTTCTTAATTACGACTGATTCTAAAACCTTTTTACATCTTTGGATTTTAGGGTTTCAAATTTTTATGATTGGATGGATA
CAGCAACACACTTGGGATGATCCGGAACATCTTGAACAAAATCAGAGTTACTGGACTCAATATCTTTATTATTCTCTAAT
TGGTTTTACTGGATTTTGGTTAGCTTCTGAAAAATTTGTTTTGGAATCTAGAAAAAATACTCTATTTCTTTGGGCCGTAA
TTTTTTGGGTTATTGGAACTTGGTCAATGGGGTTTTTTCCAAATCTTTCCAATTTTTATGGTAGTTCGGGTACAGAAAAT
GGGATTAATCATCTGTTTTCATTTCCGTGGGTGATTATGATTTGTAGATTGTTGATTCTAACTCCGATTTTCTATCTTCT
AATTACTAATTCTGAAATTGATTCTAATCAAAAAAAATCTTTAGGAATCGGTTTGGTTTTATTTTTCTTACTGTGTTTTC
CACATCCATTTCGTTATATTCATTCAGCAGAAACGATAGGAGCACATATTTGGAATTATTCTATCCAGTTGTTACCTTCA
TTTTTATTCATTTTATTTTGGTTGGCAATTGCATCCGCGTTTCGAAACCATAAAAGGATTTTCGACCTTTCTTTAGCAAT
CATAGGAATTCGGTTCTTATATTTTTATTTTGATCTATTTGGAAGTCTTACCTATACTGGATTTGGGCTTATCATTTCTG
GATTATTTATTATAGTACTTACGATCGGATATTTAAAATATAGATCTAAGGTAAGAGTTTTATTAGGAGGAGGAGAATGA

Upstream 100 bases:

>100_bases
ATTGTATTTAAAAAGTTACTGATTTAAAATACGAGTTCAGATTCTTCCGTTTAAAAAAACTTCTTGTATTTAATTTGATT
CTCCTTAACGTTTCCCATCT

Downstream 100 bases:

>100_bases
AAATTTTCAAACTAATTCTTCCTATTGCTTTGGTGTTTCCGATCTTGTTTTTCGTTTCGGAGATTATAACTTTAGAATTT
ACTAAAACTAGAGGAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRLEQKLKRWVSAGLIASEQSEAILNFEENRKSSYLYYSFLILGVVIIGIGVLAIIAANWEELDDLVKLGFSFIVLTFVA
GLSFWKRENPNLFTVFIVLYSILILGMIGLISQVYNLEGEYYQAAMLWCILSCLFLITTDSKTFLHLWILGFQIFMIGWI
QQHTWDDPEHLEQNQSYWTQYLYYSLIGFTGFWLASEKFVLESRKNTLFLWAVIFWVIGTWSMGFFPNLSNFYGSSGTEN
GINHLFSFPWVIMICRLLILTPIFYLLITNSEIDSNQKKSLGIGLVLFFLLCFPHPFRYIHSAETIGAHIWNYSIQLLPS
FLFILFWLAIASAFRNHKRIFDLSLAIIGIRFLYFYFDLFGSLTYTGFGLIISGLFIIVLTIGYLKYRSKVRVLLGGGE

Sequences:

>Translated_399_residues
MRLEQKLKRWVSAGLIASEQSEAILNFEENRKSSYLYYSFLILGVVIIGIGVLAIIAANWEELDDLVKLGFSFIVLTFVA
GLSFWKRENPNLFTVFIVLYSILILGMIGLISQVYNLEGEYYQAAMLWCILSCLFLITTDSKTFLHLWILGFQIFMIGWI
QQHTWDDPEHLEQNQSYWTQYLYYSLIGFTGFWLASEKFVLESRKNTLFLWAVIFWVIGTWSMGFFPNLSNFYGSSGTEN
GINHLFSFPWVIMICRLLILTPIFYLLITNSEIDSNQKKSLGIGLVLFFLLCFPHPFRYIHSAETIGAHIWNYSIQLLPS
FLFILFWLAIASAFRNHKRIFDLSLAIIGIRFLYFYFDLFGSLTYTGFGLIISGLFIIVLTIGYLKYRSKVRVLLGGGE
>Mature_399_residues
MRLEQKLKRWVSAGLIASEQSEAILNFEENRKSSYLYYSFLILGVVIIGIGVLAIIAANWEELDDLVKLGFSFIVLTFVA
GLSFWKRENPNLFTVFIVLYSILILGMIGLISQVYNLEGEYYQAAMLWCILSCLFLITTDSKTFLHLWILGFQIFMIGWI
QQHTWDDPEHLEQNQSYWTQYLYYSLIGFTGFWLASEKFVLESRKNTLFLWAVIFWVIGTWSMGFFPNLSNFYGSSGTEN
GINHLFSFPWVIMICRLLILTPIFYLLITNSEIDSNQKKSLGIGLVLFFLLCFPHPFRYIHSAETIGAHIWNYSIQLLPS
FLFILFWLAIASAFRNHKRIFDLSLAIIGIRFLYFYFDLFGSLTYTGFGLIISGLFIIVLTIGYLKYRSKVRVLLGGGE

Specific function: Unknown

COG id: COG4872

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46208; Mature: 46208

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA