Click here to switch to the map view.

The map label for this gene is 45657724

Identifier: 45657724

GI number: 45657724

Start: 2255804

End: 2256352

Strand: Reverse

Name: 45657724

Synonym: LIC11861

Alternate gene names: NA

Gene position: 2256352-2255804 (Counterclockwise)

Preceding gene: 45657725

Following gene: 45657718

Centisome position: 52.75

GC content: 33.88

Gene sequence:

>549_bases
ATGAAAATTTTCAAACTAATTCTTCCTATTGCTTTGGTGTTTCCGATCTTGTTTTTCGTTTCGGAGATTATAACTTTAGA
ATTTACTAAAACTAGAGGAAAGGAATTGATTCTACCAATCAAAGGTTATGATCCAAGAGATTTACTTTCGGGACACTATC
TTCAATATAATATTGGGTTTAAAACTAGCGAAGGTGACGCTGTTTGTAAAAGACAAAAAAATGAAATATTGAATCAATCT
AATTCAGATGGAAAGAGTTGTATTTGTTATCCTCATTTGGGTATGATTTATGAAAACGAAGGACTTTTTGTAGAAGATTG
TGACGAGGGAACTTTAAAGGATAAGAGTCTTTGTAAAGTATATTTACGTGGAACCTGCAAATACGGACGTTTTGAGATTG
CAAACGAACGTTTTTATGTGAACGAGGCAAAGGCTCTGGAATATGAAAAGAGACTTAGAAAAGAGAAAGTACACATTCGT
TTAAAAGTAGACTCAAAAGGAAAAGCGATTACAGATTCTCTGATTTGGGAGGACGGATCTTCGCTGTGA

Upstream 100 bases:

>100_bases
CTGGATTTGGGCTTATCATTTCTGGATTATTTATTATAGTACTTACGATCGGATATTTAAAATATAGATCTAAGGTAAGA
GTTTTATTAGGAGGAGGAGA

Downstream 100 bases:

>100_bases
CTTCGTTTAAACTACAAAAGTCATTTTCCGCATAACCAGCGTTCATTCCTAAGTCGTAGATTTCCGGAAGATTTTTACAA
AGGGAAAGGTTTGTTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKIFKLILPIALVFPILFFVSEIITLEFTKTRGKELILPIKGYDPRDLLSGHYLQYNIGFKTSEGDAVCKRQKNEILNQS
NSDGKSCICYPHLGMIYENEGLFVEDCDEGTLKDKSLCKVYLRGTCKYGRFEIANERFYVNEAKALEYEKRLRKEKVHIR
LKVDSKGKAITDSLIWEDGSSL

Sequences:

>Translated_182_residues
MKIFKLILPIALVFPILFFVSEIITLEFTKTRGKELILPIKGYDPRDLLSGHYLQYNIGFKTSEGDAVCKRQKNEILNQS
NSDGKSCICYPHLGMIYENEGLFVEDCDEGTLKDKSLCKVYLRGTCKYGRFEIANERFYVNEAKALEYEKRLRKEKVHIR
LKVDSKGKAITDSLIWEDGSSL
>Mature_182_residues
MKIFKLILPIALVFPILFFVSEIITLEFTKTRGKELILPIKGYDPRDLLSGHYLQYNIGFKTSEGDAVCKRQKNEILNQS
NSDGKSCICYPHLGMIYENEGLFVEDCDEGTLKDKSLCKVYLRGTCKYGRFEIANERFYVNEAKALEYEKRLRKEKVHIR
LKVDSKGKAITDSLIWEDGSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20959; Mature: 20959

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFKLILPIALVFPILFFVSEIITLEFTKTRGKELILPIKGYDPRDLLSGHYLQYNIGF
CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCHHHHHCCCEEEEECCE
KTSEGDAVCKRQKNEILNQSNSDGKSCICYPHLGMIYENEGLFVEDCDEGTLKDKSLCKV
ECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCCCHHHHEE
YLRGTCKYGRFEIANERFYVNEAKALEYEKRLRKEKVHIRLKVDSKGKAITDSLIWEDGS
EEECCCCCCCEEECCCEEEECHHHHHHHHHHHHHCEEEEEEEECCCCCEEEHHHEECCCC
SL
CC
>Mature Secondary Structure
MKIFKLILPIALVFPILFFVSEIITLEFTKTRGKELILPIKGYDPRDLLSGHYLQYNIGF
CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCHHHHHCCCEEEEECCE
KTSEGDAVCKRQKNEILNQSNSDGKSCICYPHLGMIYENEGLFVEDCDEGTLKDKSLCKV
ECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCCCHHHHEE
YLRGTCKYGRFEIANERFYVNEAKALEYEKRLRKEKVHIRLKVDSKGKAITDSLIWEDGS
EEECCCCCCCEEECCCEEEECHHHHHHHHHHHHHCEEEEEEEECCCCCEEEHHHEECCCC
SL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA