| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is pdtaS [H]
Identifier: 45657316
GI number: 45657316
Start: 1775899
End: 1777350
Strand: Direct
Name: pdtaS [H]
Synonym: LIC11440
Alternate gene names: 45657316
Gene position: 1775899-1777350 (Clockwise)
Preceding gene: 45657315
Following gene: 45657320
Centisome position: 41.52
GC content: 34.37
Gene sequence:
>1452_bases ATGTTTAAAGATACTTTTTCAGTTCTTTTGATCGAGGATTCAAATGCGGATTACAGATTGATTCAGGAATATCTGGGTGA ATCTCAAAGTCCTTCTTTTCAAATCAGTCGTAGCACTGATTTTTCTGCCGGGCTTAGTTTTATCACTAATGAAAGTCCTG ATTTAGTGATGTTGGATCTTTCTCTTCCAGATCGAACCGGTTTAGAAGCGTTATCCGAAATTAAAAGAAAGTTCCCTCAA ATTCCTGTTATCATTTGTAGTGGAGCGGAAGACAAAGATATTACCGTAAATGCTCTTCAGATAGGAGCCCAGGATTACGT TTATAAGGGTAAGTTCGACTCTTATTCTTTAAGTCGTTCTCTCGTTTTTGCTTACGAAAGAAATCGTTTAGCTTTGGAAC TTGAAAAGAAAAGTGTTTTTGAACAAGAAAGTGAAGAAAGGTATCGTTTATTTTTTCAATACAATCCTCATCCTGCTTTT TTATTTGAACATGATTCTTTGGAAATTTTAGAAATAAATCGAGCCGTTCTTGAAAAATACGGTTATGAAGAGAAGGATTT GATTGGTAAATCGATTCTACAGATTTTTGAACTGTCTGATTTCGATAAAGTAAAACAGGAAATTATTTTTTTTCAGTTTG GGGCCAATCAAGCTTCCTCGTTTGTCCACAAAAAAAAGAACGGAGAAAAATTGATCGCGGATACTACCGTTTATAAGTTT CGTTATCAAAATCAAATTTTGGATTTAGCGGTTGTTACAGATATTACCGAGATGGTTCGAAATAGAGAATCGATTCTTGC TACTCTTGCAGAAAAAGATGCTTTGATTCAGGAAATTCATCATAGAGTCAAAAACAACATGCAGATCATGATTTCTCTTT TAAATCTACAAGCGGACAACGCTATGTCTAGAAATCTCACTGCAAAAGAACTTTATAATTTATTAAAAGATACTGAAAGC AGGGTTTTTTCTATGTCCTTGGTTCATAATGAACTTTATAAATCCAACGATCTTTCTCATGTGGATTTTCATAGTTATTT GAATATGCTTTTAGAAAATCTTTGGAATTTATACGGAGTAGGTTTAAAAATTAAACATTTGGTAGAAGCCCAAGGTTTGG TCTTAAGCATGAACATCGCAATTTCACTTGGGCTCATCGTTTGTGAGCTAGTCACAAATGCTATCAAACACGCGTTTCCA GACGGTTACGAAGGGCTTTTAAAAATTTTCGCTCGTTGTGAATTGGGAAGTACGATCGTAACCATTGAAGATAATGGAAA AGGAATTCCGAAAGAAATGATAAGTAAAAATCATGAAACCCTTGGATTACAACTTGTTAATATTCTTACAAAGCAAATCC AGGGTAAGTTACATCTTGAGGTTTTGGATCCAGGAACTAAATTTGAAATCCGATTTCCGGAACAAAAAGGAACGGTTCAA AGAAAACTATAA
Upstream 100 bases:
>100_bases CTGGAAATAGAAACCGATCGTACTTCCGGTTTTGGTGTAATCATACGTTTTCCCAGAGAATTTATTTTAGAACGATGAAT ATGTAGAGAGTTTCATTCTT
Downstream 100 bases:
>100_bases ATTTCGAAATAGTTATCAATTATAGGAATTTAGGATCTATTACTGCTTGAACACATGAAAATGTTACCCGAAATTAACTA TCGATTTTACAAAAATACGG
Product: histidine kinase response regulator hybrid protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MFKDTFSVLLIEDSNADYRLIQEYLGESQSPSFQISRSTDFSAGLSFITNESPDLVMLDLSLPDRTGLEALSEIKRKFPQ IPVIICSGAEDKDITVNALQIGAQDYVYKGKFDSYSLSRSLVFAYERNRLALELEKKSVFEQESEERYRLFFQYNPHPAF LFEHDSLEILEINRAVLEKYGYEEKDLIGKSILQIFELSDFDKVKQEIIFFQFGANQASSFVHKKKNGEKLIADTTVYKF RYQNQILDLAVVTDITEMVRNRESILATLAEKDALIQEIHHRVKNNMQIMISLLNLQADNAMSRNLTAKELYNLLKDTES RVFSMSLVHNELYKSNDLSHVDFHSYLNMLLENLWNLYGVGLKIKHLVEAQGLVLSMNIAISLGLIVCELVTNAIKHAFP DGYEGLLKIFARCELGSTIVTIEDNGKGIPKEMISKNHETLGLQLVNILTKQIQGKLHLEVLDPGTKFEIRFPEQKGTVQ RKL
Sequences:
>Translated_483_residues MFKDTFSVLLIEDSNADYRLIQEYLGESQSPSFQISRSTDFSAGLSFITNESPDLVMLDLSLPDRTGLEALSEIKRKFPQ IPVIICSGAEDKDITVNALQIGAQDYVYKGKFDSYSLSRSLVFAYERNRLALELEKKSVFEQESEERYRLFFQYNPHPAF LFEHDSLEILEINRAVLEKYGYEEKDLIGKSILQIFELSDFDKVKQEIIFFQFGANQASSFVHKKKNGEKLIADTTVYKF RYQNQILDLAVVTDITEMVRNRESILATLAEKDALIQEIHHRVKNNMQIMISLLNLQADNAMSRNLTAKELYNLLKDTES RVFSMSLVHNELYKSNDLSHVDFHSYLNMLLENLWNLYGVGLKIKHLVEAQGLVLSMNIAISLGLIVCELVTNAIKHAFP DGYEGLLKIFARCELGSTIVTIEDNGKGIPKEMISKNHETLGLQLVNILTKQIQGKLHLEVLDPGTKFEIRFPEQKGTVQ RKL >Mature_483_residues MFKDTFSVLLIEDSNADYRLIQEYLGESQSPSFQISRSTDFSAGLSFITNESPDLVMLDLSLPDRTGLEALSEIKRKFPQ IPVIICSGAEDKDITVNALQIGAQDYVYKGKFDSYSLSRSLVFAYERNRLALELEKKSVFEQESEERYRLFFQYNPHPAF LFEHDSLEILEINRAVLEKYGYEEKDLIGKSILQIFELSDFDKVKQEIIFFQFGANQASSFVHKKKNGEKLIADTTVYKF RYQNQILDLAVVTDITEMVRNRESILATLAEKDALIQEIHHRVKNNMQIMISLLNLQADNAMSRNLTAKELYNLLKDTES RVFSMSLVHNELYKSNDLSHVDFHSYLNMLLENLWNLYGVGLKIKHLVEAQGLVLSMNIAISLGLIVCELVTNAIKHAFP DGYEGLLKIFARCELGSTIVTIEDNGKGIPKEMISKNHETLGLQLVNILTKQIQGKLHLEVLDPGTKFEIRFPEQKGTVQ RKL
Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR022066 - InterPro: IPR011495 - InterPro: IPR005467 [H]
Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 55245; Mature: 55245
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKDTFSVLLIEDSNADYRLIQEYLGESQSPSFQISRSTDFSAGLSFITNESPDLVMLDL CCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHCHHHEECCCCCEEEEEE SLPDRTGLEALSEIKRKFPQIPVIICSGAEDKDITVNALQIGAQDYVYKGKFDSYSLSRS CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCE LVFAYERNRLALELEKKSVFEQESEERYRLFFQYNPHPAFLFEHDSLEILEINRAVLEKY EEEEEECCEEEEEEHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEHHHHHHHHHC GYEEKDLIGKSILQIFELSDFDKVKQEIIFFQFGANQASSFVHKKKNGEKLIADTTVYKF CCCHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEE RYQNQILDLAVVTDITEMVRNRESILATLAEKDALIQEIHHRVKNNMQIMISLLNLQADN EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCC AMSRNLTAKELYNLLKDTESRVFSMSLVHNELYKSNDLSHVDFHSYLNMLLENLWNLYGV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC GLKIKHLVEAQGLVLSMNIAISLGLIVCELVTNAIKHAFPDGYEGLLKIFARCELGSTIV CCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE TIEDNGKGIPKEMISKNHETLGLQLVNILTKQIQGKLHLEVLDPGTKFEIRFPEQKGTVQ EEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCC RKL CCC >Mature Secondary Structure MFKDTFSVLLIEDSNADYRLIQEYLGESQSPSFQISRSTDFSAGLSFITNESPDLVMLDL CCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHCHHHEECCCCCEEEEEE SLPDRTGLEALSEIKRKFPQIPVIICSGAEDKDITVNALQIGAQDYVYKGKFDSYSLSRS CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCE LVFAYERNRLALELEKKSVFEQESEERYRLFFQYNPHPAFLFEHDSLEILEINRAVLEKY EEEEEECCEEEEEEHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEHHHHHHHHHC GYEEKDLIGKSILQIFELSDFDKVKQEIIFFQFGANQASSFVHKKKNGEKLIADTTVYKF CCCHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEE RYQNQILDLAVVTDITEMVRNRESILATLAEKDALIQEIHHRVKNNMQIMISLLNLQADN EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCC AMSRNLTAKELYNLLKDTESRVFSMSLVHNELYKSNDLSHVDFHSYLNMLLENLWNLYGV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC GLKIKHLVEAQGLVLSMNIAISLGLIVCELVTNAIKHAFPDGYEGLLKIFARCELGSTIV CCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE TIEDNGKGIPKEMISKNHETLGLQLVNILTKQIQGKLHLEVLDPGTKFEIRFPEQKGTVQ EEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCC RKL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]