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The map label for this gene is yqgE [C]

Identifier: 45656419

GI number: 45656419

Start: 628614

End: 629162

Strand: Reverse

Name: yqgE [C]

Synonym: LIC10521

Alternate gene names: 45656419

Gene position: 629162-628614 (Counterclockwise)

Preceding gene: 45656420

Following gene: 45656418

Centisome position: 14.71

GC content: 36.07

Gene sequence:

>549_bases
ATGGAAGAAAATTACAGCGGAAAAATTTTAATCTCCAATTCTTCGATCGTCATGGATTATTTTAATCGAACCGTCATTCT
AATGGTGGAACATGACAATCAAGGAGCCTTTGGTTTAGTTCTCAATAAAAGACAAGAAGCATCTATAGGAGAAGTAATTC
AAGGTATTCCAGATCACGTTAGCCGAAACCTACTTATCTATTCAGGTGGCCCAGTAGATCCTACATTTATTTCCGTATTA
CATGAAGATAATAAAATTTCCCAACCGGGAATCGAAATAATTCCGGGTTTATATCTTGCGAGAAGTTTTGATACTCTTCT
AGAATTATTAAAATCTTCTTCCAAATTTCATGTATTCCAAGGTTATTCTGGCTGGGGTGCAGGGCAATTGGAAACGGAAA
TGAATCGCAAGTCCTGGGTAATTCACGAAGCCTCTAAAGACTTTGTTTTAAATCAAGATCCTGAAACTACTTGGCAAGAA
GCTCTCAGAAGCAAGGGTGGAATTTATAAATATTTCGTAGAACATACAAAAGACCCTATGTTAAATTAA

Upstream 100 bases:

>100_bases
ATAGAAATTCGGACGTTTCTACTTTAGAAATTGCTTATCAAATTCTTTCGGAAATTCACGGAACTTCTAATAAGTAATCC
AGTCTAAAATTGGTTAAAAT

Downstream 100 bases:

>100_bases
AGAAGGAACCTCTGATCGTCTTATTAGATTTCTGTATGAAATCGTCGTTTGGTGATCGTCATCAAATTAAAAATTCGTTT
TATAAAGATTCTCTTAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDHVSRNLLIYSGGPVDPTFISVL
HEDNKISQPGIEIIPGLYLARSFDTLLELLKSSSKFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFVLNQDPETTWQE
ALRSKGGIYKYFVEHTKDPMLN

Sequences:

>Translated_182_residues
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDHVSRNLLIYSGGPVDPTFISVL
HEDNKISQPGIEIIPGLYLARSFDTLLELLKSSSKFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFVLNQDPETTWQE
ALRSKGGIYKYFVEHTKDPMLN
>Mature_182_residues
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDHVSRNLLIYSGGPVDPTFISVL
HEDNKISQPGIEIIPGLYLARSFDTLLELLKSSSKFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFVLNQDPETTWQE
ALRSKGGIYKYFVEHTKDPMLN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 20565; Mature: 20565

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDHV
CCCCCCCEEEEECCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCHHHH
SRNLLIYSGGPVDPTFISVLHEDNKISQPGIEIIPGLYLARSFDTLLELLKSSSKFHVFQ
CCCEEEEECCCCCHHHHEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEE
GYSGWGAGQLETEMNRKSWVIHEASKDFVLNQDPETTWQEALRSKGGIYKYFVEHTKDPM
CCCCCCCCCCHHCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHCCCEEEEHHHCCCCCC
LN
CC
>Mature Secondary Structure
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDHV
CCCCCCCEEEEECCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCHHHH
SRNLLIYSGGPVDPTFISVLHEDNKISQPGIEIIPGLYLARSFDTLLELLKSSSKFHVFQ
CCCEEEEECCCCCHHHHEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEE
GYSGWGAGQLETEMNRKSWVIHEASKDFVLNQDPETTWQEALRSKGGIYKYFVEHTKDPM
CCCCCCCCCCHHCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHCCCEEEEHHHCCCCCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]