Click here to switch to the map view.

The map label for this gene is 45656418

Identifier: 45656418

GI number: 45656418

Start: 627768

End: 628052

Strand: Reverse

Name: 45656418

Synonym: LIC10520

Alternate gene names: NA

Gene position: 628052-627768 (Counterclockwise)

Preceding gene: 45656419

Following gene: 304570513

Centisome position: 14.68

GC content: 32.28

Gene sequence:

>285_bases
ATGAAAAAATTTCAAGGCCTGTTTTTTACTTTCACGATTTTAATTTCTTTATTTCTAATTAAAGATCTTTCCGCAGATGG
TTGTTATATTTGTACTTCTGGTTCTACAGATCTTTGTAGAGATTATTGCAGATACACCGGTTCTGATACATTTGATAACA
GAAAAAAATGTCAAGACAAAGGTTGTAAAGTAGGTGGAACAGCTTCTTGTCCTACCGCTTCCAATTATAAGGTTTGTTCC
GCTCAAATTAATATTTCGACATACAAACTTTTCGCTTCAAATTGA

Upstream 100 bases:

>100_bases
ACTCGTTTAACTTTTTTGAAACTTTAAGACAATTCTAAAGTCTTTTTAACCTTTACAACAAAGTTAAAATTTCTAAGATC
ATCAATCAAGGGGTTAAGGT

Downstream 100 bases:

>100_bases
TAAGACTCTCAATCAATATTAAAAAAGGCGAAAGTAATTCAAGTAACGAGTGGTTAGGAGTTAGGGATTAGGGAACTTTG
TAAAGTTTTTAACCACTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKKFQGLFFTFTILISLFLIKDLSADGCYICTSGSTDLCRDYCRYTGSDTFDNRKKCQDKGCKVGGTASCPTASNYKVCS
AQINISTYKLFASN

Sequences:

>Translated_94_residues
MKKFQGLFFTFTILISLFLIKDLSADGCYICTSGSTDLCRDYCRYTGSDTFDNRKKCQDKGCKVGGTASCPTASNYKVCS
AQINISTYKLFASN
>Mature_94_residues
MKKFQGLFFTFTILISLFLIKDLSADGCYICTSGSTDLCRDYCRYTGSDTFDNRKKCQDKGCKVGGTASCPTASNYKVCS
AQINISTYKLFASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10391; Mature: 10391

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFQGLFFTFTILISLFLIKDLSADGCYICTSGSTDLCRDYCRYTGSDTFDNRKKCQDK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHC
GCKVGGTASCPTASNYKVCSAQINISTYKLFASN
CCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECC
>Mature Secondary Structure
MKKFQGLFFTFTILISLFLIKDLSADGCYICTSGSTDLCRDYCRYTGSDTFDNRKKCQDK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHC
GCKVGGTASCPTASNYKVCSAQINISTYKLFASN
CCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA