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The map label for this gene is 45656394

Identifier: 45656394

GI number: 45656394

Start: 577711

End: 579240

Strand: Reverse

Name: 45656394

Synonym: LIC10496

Alternate gene names: NA

Gene position: 579240-577711 (Counterclockwise)

Preceding gene: 45656401

Following gene: 45656393

Centisome position: 13.54

GC content: 35.49

Gene sequence:

>1530_bases
ATGAAAAGAAAATATCACACCTTAATCCTAGGCTTAATGTTCTTAACGCTTTTTTTCTCATCGAAGATTCGATCCCAAAC
TACAAAACAACCTCCGATAAAGATAACCTTGGATCAAGCTGTGCTCATCGGTTCCAGCAATAGTGTGGTCCTCAAAGTAT
TAGAAGCCAAAAAAGAAGTAAGTAAAATGTTGATTACAGAAAAATGGAGAGAGTTTCTTCCTAAATTCGGAATTCAATAC
TATGGCCTCAGAAATCAAAACGTAAATTCAGCGGATAATATATACAACGATATTCGTTTAACGGTTCAACAGTTGATCTT
TGACGGCGGAGAAGCGAATCTCAATTTAGAAATTGCAAAGTTATCCGAACTACTCAACGAACAAGACTTTAAAATCAATC
TTTCCAGACTTCGCCTAGACATTCAAAAAGCATATTTCAGAGCATTAGCACTAAAAGGAAAAGTTTATATTCAAAAAAAA
GCTCAAGAAAAAGCTCAAGAAGCACTTCGAAAAGGACAAGTAGAATTAAGACAAGGGTTTATCACGAAAGTTCAATTAAT
GGATTTAGAAAGTAAATTAAAACAAACTGAGTTTAATGTGCAAAAATCTAAAAATGACAGTGATCAAGCCTTATTAGACT
TAAAACAGGTCATGAACTTAGATTATTACGCAGAAATTGAACTAAACGAAAGTATATTTTTTGACTTTATCATCAATGCA
CCACCTAACACGCATAATTTGGATGAGTTAATTTCTAAAGCAAAAAACGGGCGCGAAGATTTGAAAAAAATGCAAATCAT
TGTTAAAAAGTTAAAAAACGAAAAAGAAGTATTAGATAATCAGTATATGCCAAAAGTTTATGTAGGTGCCTACGCCGGAA
GAAACGGAAACAATAATCAATTCACTCATGATAGTTACGGGGTCAATTTTAATCTAGTGATGCCTTTGGGTAGTAGTGTG
GTTCAATCCAATGGAAACACTGGGGTTCAAAAAGACGGAAACGGAATTCAAACCTATCCCGGATTTGGAAATCAAACCGT
GGGTCCCGGAACAAACAGTTATAACTCCACTTCCGTTCGATTGTTCGACAATTTAAGTCAGTCCAGAAAAGCTATGGAAG
GTGAGATACAACTTGCCGAAGCACTATTAAATTATCGTAATATGGAAAACCAAGTTGGATTCGAAATTAAAAAAAGTGTA
GATAAGCTTAATCAATCTTGGGAGCTCATCAACATCGCTAATTCGAGAATTAACCTTCAGGTAGAATCCGGAAGGGCAAT
GGCCGCAAAGGTAGCCTACGGCCATGCGAAAAAAGAAGATCAGATCAATTCCGAATTAGAAATGATCAAATCCCAAGAAG
ATCTCACGGATGCATTAACTTCCTATGCAATTAACTGTTATGAGTACGCTCAAATTACAACGGACGAAGGTGGCTTAAGA
AAATTAATCCAATACTCCAAAGGTTCGGGAAACTCGATATTATCCAATTTAATTAAAAATCAAGAAACGGGATCTAAGCC
CAAAAAATAG

Upstream 100 bases:

>100_bases
TGTAAAAAACAGAAAGTTTTTGTAAAAATCTCGGATTTTATAAAGAGAAACGGGAAAACCTAAGTAAGGTTTAAAAGAAA
AAGCGGAATCGACTTAAAAG

Downstream 100 bases:

>100_bases
GATTAGAAAAAATGACTTACACGTTTAAAAACCATAAGAGAATTTCCATCATCCGATTTTGTATTCAGATTTCGTTTTTT
ACCTTCGTTGTTCTAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Efflux Protein; LC-Like Outer Membrane Transposase

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MKRKYHTLILGLMFLTLFFSSKIRSQTTKQPPIKITLDQAVLIGSSNSVVLKVLEAKKEVSKMLITEKWREFLPKFGIQY
YGLRNQNVNSADNIYNDIRLTVQQLIFDGGEANLNLEIAKLSELLNEQDFKINLSRLRLDIQKAYFRALALKGKVYIQKK
AQEKAQEALRKGQVELRQGFITKVQLMDLESKLKQTEFNVQKSKNDSDQALLDLKQVMNLDYYAEIELNESIFFDFIINA
PPNTHNLDELISKAKNGREDLKKMQIIVKKLKNEKEVLDNQYMPKVYVGAYAGRNGNNNQFTHDSYGVNFNLVMPLGSSV
VQSNGNTGVQKDGNGIQTYPGFGNQTVGPGTNSYNSTSVRLFDNLSQSRKAMEGEIQLAEALLNYRNMENQVGFEIKKSV
DKLNQSWELINIANSRINLQVESGRAMAAKVAYGHAKKEDQINSELEMIKSQEDLTDALTSYAINCYEYAQITTDEGGLR
KLIQYSKGSGNSILSNLIKNQETGSKPKK

Sequences:

>Translated_509_residues
MKRKYHTLILGLMFLTLFFSSKIRSQTTKQPPIKITLDQAVLIGSSNSVVLKVLEAKKEVSKMLITEKWREFLPKFGIQY
YGLRNQNVNSADNIYNDIRLTVQQLIFDGGEANLNLEIAKLSELLNEQDFKINLSRLRLDIQKAYFRALALKGKVYIQKK
AQEKAQEALRKGQVELRQGFITKVQLMDLESKLKQTEFNVQKSKNDSDQALLDLKQVMNLDYYAEIELNESIFFDFIINA
PPNTHNLDELISKAKNGREDLKKMQIIVKKLKNEKEVLDNQYMPKVYVGAYAGRNGNNNQFTHDSYGVNFNLVMPLGSSV
VQSNGNTGVQKDGNGIQTYPGFGNQTVGPGTNSYNSTSVRLFDNLSQSRKAMEGEIQLAEALLNYRNMENQVGFEIKKSV
DKLNQSWELINIANSRINLQVESGRAMAAKVAYGHAKKEDQINSELEMIKSQEDLTDALTSYAINCYEYAQITTDEGGLR
KLIQYSKGSGNSILSNLIKNQETGSKPKK
>Mature_509_residues
MKRKYHTLILGLMFLTLFFSSKIRSQTTKQPPIKITLDQAVLIGSSNSVVLKVLEAKKEVSKMLITEKWREFLPKFGIQY
YGLRNQNVNSADNIYNDIRLTVQQLIFDGGEANLNLEIAKLSELLNEQDFKINLSRLRLDIQKAYFRALALKGKVYIQKK
AQEKAQEALRKGQVELRQGFITKVQLMDLESKLKQTEFNVQKSKNDSDQALLDLKQVMNLDYYAEIELNESIFFDFIINA
PPNTHNLDELISKAKNGREDLKKMQIIVKKLKNEKEVLDNQYMPKVYVGAYAGRNGNNNQFTHDSYGVNFNLVMPLGSSV
VQSNGNTGVQKDGNGIQTYPGFGNQTVGPGTNSYNSTSVRLFDNLSQSRKAMEGEIQLAEALLNYRNMENQVGFEIKKSV
DKLNQSWELINIANSRINLQVESGRAMAAKVAYGHAKKEDQINSELEMIKSQEDLTDALTSYAINCYEYAQITTDEGGLR
KLIQYSKGSGNSILSNLIKNQETGSKPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57625; Mature: 57625

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKYHTLILGLMFLTLFFSSKIRSQTTKQPPIKITLDQAVLIGSSNSVVLKVLEAKKEV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHH
SKMLITEKWREFLPKFGIQYYGLRNQNVNSADNIYNDIRLTVQQLIFDGGEANLNLEIAK
HHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHH
LSELLNEQDFKINLSRLRLDIQKAYFRALALKGKVYIQKKAQEKAQEALRKGQVELRQGF
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCHHHHHHCH
ITKVQLMDLESKLKQTEFNVQKSKNDSDQALLDLKQVMNLDYYAEIELNESIFFDFIINA
HHHEEEHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEC
PPNTHNLDELISKAKNGREDLKKMQIIVKKLKNEKEVLDNQYMPKVYVGAYAGRNGNNNQ
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEECCCCCCCC
FTHDSYGVNFNLVMPLGSSVVQSNGNTGVQKDGNGIQTYPGFGNQTVGPGTNSYNSTSVR
CCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEH
LFDNLSQSRKAMEGEIQLAEALLNYRNMENQVGFEIKKSVDKLNQSWELINIANSRINLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCCCEEEEEEECCEEEEE
VESGRAMAAKVAYGHAKKEDQINSELEMIKSQEDLTDALTSYAINCYEYAQITTDEGGLR
EECCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHH
KLIQYSKGSGNSILSNLIKNQETGSKPKK
HHHHHCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRKYHTLILGLMFLTLFFSSKIRSQTTKQPPIKITLDQAVLIGSSNSVVLKVLEAKKEV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHH
SKMLITEKWREFLPKFGIQYYGLRNQNVNSADNIYNDIRLTVQQLIFDGGEANLNLEIAK
HHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHH
LSELLNEQDFKINLSRLRLDIQKAYFRALALKGKVYIQKKAQEKAQEALRKGQVELRQGF
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCHHHHHHCH
ITKVQLMDLESKLKQTEFNVQKSKNDSDQALLDLKQVMNLDYYAEIELNESIFFDFIINA
HHHEEEHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEC
PPNTHNLDELISKAKNGREDLKKMQIIVKKLKNEKEVLDNQYMPKVYVGAYAGRNGNNNQ
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEECCCCCCCC
FTHDSYGVNFNLVMPLGSSVVQSNGNTGVQKDGNGIQTYPGFGNQTVGPGTNSYNSTSVR
CCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEH
LFDNLSQSRKAMEGEIQLAEALLNYRNMENQVGFEIKKSVDKLNQSWELINIANSRINLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCCCEEEEEEECCEEEEE
VESGRAMAAKVAYGHAKKEDQINSELEMIKSQEDLTDALTSYAINCYEYAQITTDEGGLR
EECCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHH
KLIQYSKGSGNSILSNLIKNQETGSKPKK
HHHHHCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA