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The map label for this gene is 45656401

Identifier: 45656401

GI number: 45656401

Start: 599481

End: 600833

Strand: Reverse

Name: 45656401

Synonym: LIC10503

Alternate gene names: NA

Gene position: 600833-599481 (Counterclockwise)

Preceding gene: 45656411

Following gene: 45656394

Centisome position: 14.05

GC content: 35.7

Gene sequence:

>1353_bases
ATGTACTTTTCTCTTTTTTACTTTACAAAACCTACTCCCAAATTGTTTTTGCGAAACTATGAAAACGGAATATATCAAAA
CAAAAACTCATATCACACCGCACTTGTATTAAAGGCGCAACTAGGAATGTTGTCTAAAAAGGAAAAATCCCGTATTCCAA
ACTCGACTTATTCCGATTGGAAAAAACGAAATCTCTCTTTAGTCGTTGGATTTACCGAAGACGATTCCGTTTATTTTAAA
GACGACGTCTACAGAAAGATTTCGGAAAGTAAAACCTTCAAAAAAACTCTTTCCGCTCTTCTTTTAGTTTTTCAGTTCTA
CTTCTCCTTAACGGAAAATATGCGGGGAAAAAGAAGAATCTGGAACGAGCAAAAGAAAAACATCGTTTCCATCATTACAA
GGATCTCTCCTCTCATCGGAATTAAAGCAGCCTGCAAGCTCTTGAAGATTTCTACACAACGTTTCTATCGTTGGAAAAAC
GAGGTTCACTGTTTCACTTTTACTTTTAATCTTTGTAGAAAACTACATCCAAAACAACTCACTTCTAAAGAACAAAAGGT
CATTTCTCGATATATTAAAAATCCTGAATTCACCAATTGGCCTCTCAGATCCATCTTCTATCAAATGTTAAACGACACAA
AAGCTTTTATGAATTTAAGTACTTTTTACAAGTATGCTCGAGCTTTAAGACCTGATTTCAAAAGGTTTCAAAAACCTAAA
CAAAAAATCGGAATTCGCGCTTCCTCTCCTTTAACATTACTGCACATGGATACTACCATCTTACGCGTGCAAGACGGTTC
TAAAGTTTATATCCACTTCATCATGGACAATTTCTCAAGAGCTATCCTCGGTTGGAAAGCTTCTTTAAAGTGGAATGCAA
AGAATACGGTTTCAAATCTTAAAGACGTTTGTGAAAAATTCAATCTATTTCACAAACCAATCCGTCTTCTCTGCGATGAT
GGTTCCGAAAATCAAGGCGAAGTCAACGGTTTCTTAGACCAACCCAATCTATCCATCGAAAAACTAATCGCTCAAGTAAA
CATCTCTTACTCAAACAGTATGATCGAAGCTGTGAACAAGAAAATGAAATATGAATTTCTGTTTCCTAAAAATATAGTTT
CATTTGAGGAAGTAATCGACACTCTTAAAATCGCTGTACCTAAATACAACTCAAGACCAAGTGGCGTTTTATTCGGTTTT
TCTCCCCAACAAGTTTTAAACGGAAAAATCCCCAACAAACATCGATTTATCGAACAAATCAAAAAGGCCGCTGCAATGCG
GCCTAATATCAACAAACAAGATCTATGCGATCCTTGTTCCGATACAGCTTCTATTTCAAAGAAAAAGAAATAG

Upstream 100 bases:

>100_bases
ATATTATTAGAACCTACGGTGCACGATTTTTATTATAGTAAAACAAGTCCCGGTATAAACGAAGGTTTCATTTTTAAAAT
TAGTATATCATATTATTTTT

Downstream 100 bases:

>100_bases
TAGGCTTTCAGATTCAATCACCGGTTAACTTCAAGATACTGGTGATTTTTTATTTTCAATATGAAATCAAATACAAAATC
ATTTTATCATTTGACTTTTT

Product: transposase, IS3

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MYFSLFYFTKPTPKLFLRNYENGIYQNKNSYHTALVLKAQLGMLSKKEKSRIPNSTYSDWKKRNLSLVVGFTEDDSVYFK
DDVYRKISESKTFKKTLSALLLVFQFYFSLTENMRGKRRIWNEQKKNIVSIITRISPLIGIKAACKLLKISTQRFYRWKN
EVHCFTFTFNLCRKLHPKQLTSKEQKVISRYIKNPEFTNWPLRSIFYQMLNDTKAFMNLSTFYKYARALRPDFKRFQKPK
QKIGIRASSPLTLLHMDTTILRVQDGSKVYIHFIMDNFSRAILGWKASLKWNAKNTVSNLKDVCEKFNLFHKPIRLLCDD
GSENQGEVNGFLDQPNLSIEKLIAQVNISYSNSMIEAVNKKMKYEFLFPKNIVSFEEVIDTLKIAVPKYNSRPSGVLFGF
SPQQVLNGKIPNKHRFIEQIKKAAAMRPNINKQDLCDPCSDTASISKKKK

Sequences:

>Translated_450_residues
MYFSLFYFTKPTPKLFLRNYENGIYQNKNSYHTALVLKAQLGMLSKKEKSRIPNSTYSDWKKRNLSLVVGFTEDDSVYFK
DDVYRKISESKTFKKTLSALLLVFQFYFSLTENMRGKRRIWNEQKKNIVSIITRISPLIGIKAACKLLKISTQRFYRWKN
EVHCFTFTFNLCRKLHPKQLTSKEQKVISRYIKNPEFTNWPLRSIFYQMLNDTKAFMNLSTFYKYARALRPDFKRFQKPK
QKIGIRASSPLTLLHMDTTILRVQDGSKVYIHFIMDNFSRAILGWKASLKWNAKNTVSNLKDVCEKFNLFHKPIRLLCDD
GSENQGEVNGFLDQPNLSIEKLIAQVNISYSNSMIEAVNKKMKYEFLFPKNIVSFEEVIDTLKIAVPKYNSRPSGVLFGF
SPQQVLNGKIPNKHRFIEQIKKAAAMRPNINKQDLCDPCSDTASISKKKK
>Mature_450_residues
MYFSLFYFTKPTPKLFLRNYENGIYQNKNSYHTALVLKAQLGMLSKKEKSRIPNSTYSDWKKRNLSLVVGFTEDDSVYFK
DDVYRKISESKTFKKTLSALLLVFQFYFSLTENMRGKRRIWNEQKKNIVSIITRISPLIGIKAACKLLKISTQRFYRWKN
EVHCFTFTFNLCRKLHPKQLTSKEQKVISRYIKNPEFTNWPLRSIFYQMLNDTKAFMNLSTFYKYARALRPDFKRFQKPK
QKIGIRASSPLTLLHMDTTILRVQDGSKVYIHFIMDNFSRAILGWKASLKWNAKNTVSNLKDVCEKFNLFHKPIRLLCDD
GSENQGEVNGFLDQPNLSIEKLIAQVNISYSNSMIEAVNKKMKYEFLFPKNIVSFEEVIDTLKIAVPKYNSRPSGVLFGF
SPQQVLNGKIPNKHRFIEQIKKAAAMRPNINKQDLCDPCSDTASISKKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52634; Mature: 52634

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFSLFYFTKPTPKLFLRNYENGIYQNKNSYHTALVLKAQLGMLSKKEKSRIPNSTYSDW
CEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHH
KKRNLSLVVGFTEDDSVYFKDDVYRKISESKTFKKTLSALLLVFQFYFSLTENMRGKRRI
HHCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
WNEQKKNIVSIITRISPLIGIKAACKLLKISTQRFYRWKNEVHCFTFTFNLCRKLHPKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHCCCHHH
TSKEQKVISRYIKNPEFTNWPLRSIFYQMLNDTKAFMNLSTFYKYARALRPDFKRFQKPK
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHH
QKIGIRASSPLTLLHMDTTILRVQDGSKVYIHFIMDNFSRAILGWKASLKWNAKNTVSNL
HHHCCCCCCCEEEEEECEEEEEEECCCEEEEEEEHHHHHHHHHCEEEEEEECCHHHHHHH
KDVCEKFNLFHKPIRLLCDDGSENQGEVNGFLDQPNLSIEKLIAQVNISYSNSMIEAVNK
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
KMKYEFLFPKNIVSFEEVIDTLKIAVPKYNSRPSGVLFGFSPQQVLNGKIPNKHRFIEQI
HHEEEEECCCHHCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCCHHHHHHHH
KKAAAMRPNINKQDLCDPCSDTASISKKKK
HHHHHCCCCCCHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MYFSLFYFTKPTPKLFLRNYENGIYQNKNSYHTALVLKAQLGMLSKKEKSRIPNSTYSDW
CEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHH
KKRNLSLVVGFTEDDSVYFKDDVYRKISESKTFKKTLSALLLVFQFYFSLTENMRGKRRI
HHCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
WNEQKKNIVSIITRISPLIGIKAACKLLKISTQRFYRWKNEVHCFTFTFNLCRKLHPKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHCCCHHH
TSKEQKVISRYIKNPEFTNWPLRSIFYQMLNDTKAFMNLSTFYKYARALRPDFKRFQKPK
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHH
QKIGIRASSPLTLLHMDTTILRVQDGSKVYIHFIMDNFSRAILGWKASLKWNAKNTVSNL
HHHCCCCCCCEEEEEECEEEEEEECCCEEEEEEEHHHHHHHHHCEEEEEEECCHHHHHHH
KDVCEKFNLFHKPIRLLCDDGSENQGEVNGFLDQPNLSIEKLIAQVNISYSNSMIEAVNK
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
KMKYEFLFPKNIVSFEEVIDTLKIAVPKYNSRPSGVLFGFSPQQVLNGKIPNKHRFIEQI
HHEEEEECCCHHCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCCHHHHHHHH
KKAAAMRPNINKQDLCDPCSDTASISKKKK
HHHHHCCCCCCHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA