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The map label for this gene is 45656393

Identifier: 45656393

GI number: 45656393

Start: 575873

End: 577699

Strand: Reverse

Name: 45656393

Synonym: LIC10495

Alternate gene names: NA

Gene position: 577699-575873 (Counterclockwise)

Preceding gene: 45656394

Following gene: 45656392

Centisome position: 13.51

GC content: 41.32

Gene sequence:

>1827_bases
ATGACTTACACGTTTAAAAACCATAAGAGAATTTCCATCATCCGATTTTGTATTCAGATTTCGTTTTTTACCTTCGTTGT
TCTAAACTTAAACTGTCAAGATACGGGAGAAAAACTTTTAGGACTGGGGGCGTTATGGGGAGATCCACCTCCAGAAGTTA
TCTTTAGTAGCCCTGCTTCAGGAAGTGATAGTCTTCCATCTACACAGAAATTTGACGTTGGGTTTAGTAGAGAAATGAAT
ATGCAAAGTTGTAGAATTGCATTCAGTATGTCTCCACAAACTACTGGTTTTTTTACAGAACTAAATGGAACCGTTCTTAC
ATTTGCACCATCTATGCCCTTAAATCCAGGAAGTTATACTTATACGGTAACTAAAAACTGTGAAGACAAAGCTGGTCTGG
ATCTCAAAGACCCTTTCAGTGCTTCTATTACTATTGGAAGCGCAAGCGCTGCAGGACTGTCTCCCTCCATAAGTGGGATG
TTTGTTTATGCTGGGAACGCACCAGTTTGTAATGCTGGAACTGCTACAATGACCGATTTTTTTGCAAGTAACGTGACTAC
TGCCTGTATGGGAAATCCATTAGTAAATCAAGTTATTGTAAACTTTTCTAGACCAATGAACACTACGGCAACATTAAACG
CTCTTTCTATCAGTCCTACAGTATCCGCAAATTACGTTTGGAACTCTCCCAATACTCTAACAATCCAACCGGATTTCGCT
TTCAATTCTAACCAAAGATATATAGTCAATTTTGGAACGGGTGCCAAAGATCAAAACGGAATTGCTCTTAGTGGAAATAC
GGTAGGCACATTTTTTGTAGGCACTGCAAACGCAGGTCCAAATATAAACACGATCACGGTTCCAACTGGCAGTTTAGCAG
GATGTCAAGCTGGAATCGGTATTCCTACAGACATCATAGCAACAACTGTAAACAACGGTTGTTTAGGAAATCCGAATACA
CAATCCATCGTATTTAATTTTAACACTCCTATGAATACTGCGGTTACACAAGCCGCGATCAGCATCTCACCTCCAATAAG
TGGAACTTTTGCTTGGTCCGCCGGAAATCAAACCTTAGTATTTACTACGGACTCAAAATTAGAATACGGAACCAGATATA
ATATTTCGATTGGTACATCTGCCCAAGCCGCCAATCAAACATACTTAACCACACCAGTATCGGCTAGTTTTATCGCGGGT
GGAAATAATCCAAATCCAATCGTACAAGCAGTTGGTCTTGTAAGTCAAGTAGGAGCTCCTGGTTGCGCTCCTTCGTTTCC
TGCAGTCGGAAGCGCTACCGGTGGAAACTGGACCGCTGCATCTTGTTGGTGGGATAACAGTTTGCCCGTTTTACAACCTA
GCAGTTATCGTTTCGAAGGTGGAGACGAAGGAAACAATAACGCAGCTTCGTGTAACAATAAAACAACGGACGACTTCCGA
CTTGTATTTAATAATTATATGAACTTAGGAAACACTGTAGGATCAGTTTCTTTATCCAGAGAATCCGGAGCTTCTACAGT
AATTCGTTTATCTAGTTGGAGTTGGAGTGACTGCCAGGCTGTCTATCCTTTTGGATGTAGAGTTTTAGATCTCAGATTTT
CGGAAATGGAATCCAGTTGTGGAGGTGTAAACGAATTCGGAAGTTCTGCAGATTTTAATCTCACAAACGCAAAGTTTGAC
TTTAGTGCCAACAATGGAGCTATTCCTTACCCGGCTATTCCTACATCGCCTAACTATCCCGTTTATACAATCCAGATAAG
CGGGGCGGCAACGGATATATTAGGAAGACCTTTGACGCCATTCAGTTTTTCGGCGGCAAGTCAGTAA

Upstream 100 bases:

>100_bases
AATTAATCCAATACTCCAAAGGTTCGGGAAACTCGATATTATCCAATTTAATTAAAAATCAAGAAACGGGATCTAAGCCC
AAAAAATAGGATTAGAAAAA

Downstream 100 bases:

>100_bases
TAAAACGAAACGGAGAAATTTCAATGAATCAATTATTTTATAAAATTATAATATTATTTTTTACAAGTATAATACTAAAC
GGTTGCGTAATCTTTGGCAA

Product: cytoplasmic membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MTYTFKNHKRISIIRFCIQISFFTFVVLNLNCQDTGEKLLGLGALWGDPPPEVIFSSPASGSDSLPSTQKFDVGFSREMN
MQSCRIAFSMSPQTTGFFTELNGTVLTFAPSMPLNPGSYTYTVTKNCEDKAGLDLKDPFSASITIGSASAAGLSPSISGM
FVYAGNAPVCNAGTATMTDFFASNVTTACMGNPLVNQVIVNFSRPMNTTATLNALSISPTVSANYVWNSPNTLTIQPDFA
FNSNQRYIVNFGTGAKDQNGIALSGNTVGTFFVGTANAGPNINTITVPTGSLAGCQAGIGIPTDIIATTVNNGCLGNPNT
QSIVFNFNTPMNTAVTQAAISISPPISGTFAWSAGNQTLVFTTDSKLEYGTRYNISIGTSAQAANQTYLTTPVSASFIAG
GNNPNPIVQAVGLVSQVGAPGCAPSFPAVGSATGGNWTAASCWWDNSLPVLQPSSYRFEGGDEGNNNAASCNNKTTDDFR
LVFNNYMNLGNTVGSVSLSRESGASTVIRLSSWSWSDCQAVYPFGCRVLDLRFSEMESSCGGVNEFGSSADFNLTNAKFD
FSANNGAIPYPAIPTSPNYPVYTIQISGAATDILGRPLTPFSFSAASQ

Sequences:

>Translated_608_residues
MTYTFKNHKRISIIRFCIQISFFTFVVLNLNCQDTGEKLLGLGALWGDPPPEVIFSSPASGSDSLPSTQKFDVGFSREMN
MQSCRIAFSMSPQTTGFFTELNGTVLTFAPSMPLNPGSYTYTVTKNCEDKAGLDLKDPFSASITIGSASAAGLSPSISGM
FVYAGNAPVCNAGTATMTDFFASNVTTACMGNPLVNQVIVNFSRPMNTTATLNALSISPTVSANYVWNSPNTLTIQPDFA
FNSNQRYIVNFGTGAKDQNGIALSGNTVGTFFVGTANAGPNINTITVPTGSLAGCQAGIGIPTDIIATTVNNGCLGNPNT
QSIVFNFNTPMNTAVTQAAISISPPISGTFAWSAGNQTLVFTTDSKLEYGTRYNISIGTSAQAANQTYLTTPVSASFIAG
GNNPNPIVQAVGLVSQVGAPGCAPSFPAVGSATGGNWTAASCWWDNSLPVLQPSSYRFEGGDEGNNNAASCNNKTTDDFR
LVFNNYMNLGNTVGSVSLSRESGASTVIRLSSWSWSDCQAVYPFGCRVLDLRFSEMESSCGGVNEFGSSADFNLTNAKFD
FSANNGAIPYPAIPTSPNYPVYTIQISGAATDILGRPLTPFSFSAASQ
>Mature_607_residues
TYTFKNHKRISIIRFCIQISFFTFVVLNLNCQDTGEKLLGLGALWGDPPPEVIFSSPASGSDSLPSTQKFDVGFSREMNM
QSCRIAFSMSPQTTGFFTELNGTVLTFAPSMPLNPGSYTYTVTKNCEDKAGLDLKDPFSASITIGSASAAGLSPSISGMF
VYAGNAPVCNAGTATMTDFFASNVTTACMGNPLVNQVIVNFSRPMNTTATLNALSISPTVSANYVWNSPNTLTIQPDFAF
NSNQRYIVNFGTGAKDQNGIALSGNTVGTFFVGTANAGPNINTITVPTGSLAGCQAGIGIPTDIIATTVNNGCLGNPNTQ
SIVFNFNTPMNTAVTQAAISISPPISGTFAWSAGNQTLVFTTDSKLEYGTRYNISIGTSAQAANQTYLTTPVSASFIAGG
NNPNPIVQAVGLVSQVGAPGCAPSFPAVGSATGGNWTAASCWWDNSLPVLQPSSYRFEGGDEGNNNAASCNNKTTDDFRL
VFNNYMNLGNTVGSVSLSRESGASTVIRLSSWSWSDCQAVYPFGCRVLDLRFSEMESSCGGVNEFGSSADFNLTNAKFDF
SANNGAIPYPAIPTSPNYPVYTIQISGAATDILGRPLTPFSFSAASQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63916; Mature: 63785

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTFKNHKRISIIRFCIQISFFTFVVLNLNCQDTGEKLLGLGALWGDPPPEVIFSSPAS
CCEEECCCCEEHHHHHHHHHHEEEEEEEECCCCCCCCHHEEEECCCCCCCCCEEEECCCC
GSDSLPSTQKFDVGFSREMNMQSCRIAFSMSPQTTGFFTELNGTVLTFAPSMPLNPGSYT
CCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCEE
YTVTKNCEDKAGLDLKDPFSASITIGSASAAGLSPSISGMFVYAGNAPVCNAGTATMTDF
EEEECCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHH
FASNVTTACMGNPLVNQVIVNFSRPMNTTATLNALSISPTVSANYVWNSPNTLTIQPDFA
HHHCCCHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEEECCCC
FNSNQRYIVNFGTGAKDQNGIALSGNTVGTFFVGTANAGPNINTITVPTGSLAGCQAGIG
CCCCCEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
IPTDIIATTVNNGCLGNPNTQSIVFNFNTPMNTAVTQAAISISPPISGTFAWSAGNQTLV
CCHHHEEEECCCCCCCCCCCCEEEEEECCCCCHHHEEEEEEECCCCCCEEEEECCCEEEE
FTTDSKLEYGTRYNISIGTSAQAANQTYLTTPVSASFIAGGNNPNPIVQAVGLVSQVGAP
EEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
GCAPSFPAVGSATGGNWTAASCWWDNSLPVLQPSSYRFEGGDEGNNNAASCNNKTTDDFR
CCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCEEECCCCCCCCCCCCCCCCCCHHHH
LVFNNYMNLGNTVGSVSLSRESGASTVIRLSSWSWSDCQAVYPFGCRVLDLRFSEMESSC
HHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEECCCCEEEEEEEHHHHHHHC
GGVNEFGSSADFNLTNAKFDFSANNGAIPYPAIPTSPNYPVYTIQISGAATDILGRPLTP
CCHHHCCCCCCCEEECEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCC
FSFSAASQ
CCCCCCCC
>Mature Secondary Structure 
TYTFKNHKRISIIRFCIQISFFTFVVLNLNCQDTGEKLLGLGALWGDPPPEVIFSSPAS
CEEECCCCEEHHHHHHHHHHEEEEEEEECCCCCCCCHHEEEECCCCCCCCCEEEECCCC
GSDSLPSTQKFDVGFSREMNMQSCRIAFSMSPQTTGFFTELNGTVLTFAPSMPLNPGSYT
CCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCEE
YTVTKNCEDKAGLDLKDPFSASITIGSASAAGLSPSISGMFVYAGNAPVCNAGTATMTDF
EEEECCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHH
FASNVTTACMGNPLVNQVIVNFSRPMNTTATLNALSISPTVSANYVWNSPNTLTIQPDFA
HHHCCCHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEEECCCC
FNSNQRYIVNFGTGAKDQNGIALSGNTVGTFFVGTANAGPNINTITVPTGSLAGCQAGIG
CCCCCEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
IPTDIIATTVNNGCLGNPNTQSIVFNFNTPMNTAVTQAAISISPPISGTFAWSAGNQTLV
CCHHHEEEECCCCCCCCCCCCEEEEEECCCCCHHHEEEEEEECCCCCCEEEEECCCEEEE
FTTDSKLEYGTRYNISIGTSAQAANQTYLTTPVSASFIAGGNNPNPIVQAVGLVSQVGAP
EEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
GCAPSFPAVGSATGGNWTAASCWWDNSLPVLQPSSYRFEGGDEGNNNAASCNNKTTDDFR
CCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCEEECCCCCCCCCCCCCCCCCCHHHH
LVFNNYMNLGNTVGSVSLSRESGASTVIRLSSWSWSDCQAVYPFGCRVLDLRFSEMESSC
HHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEECCCCEEEEEEEHHHHHHHC
GGVNEFGSSADFNLTNAKFDFSANNGAIPYPAIPTSPNYPVYTIQISGAATDILGRPLTP
CCHHHCCCCCCCEEECEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCC
FSFSAASQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA