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The map label for this gene is 45656377

Identifier: 45656377

GI number: 45656377

Start: 552776

End: 554374

Strand: Reverse

Name: 45656377

Synonym: LIC10479

Alternate gene names: NA

Gene position: 554374-552776 (Counterclockwise)

Preceding gene: 45656378

Following gene: 45656376

Centisome position: 12.96

GC content: 27.33

Gene sequence:

>1599_bases
ATGAAACTTAAAAACTTGTTCTTAAAATATTCAATTCGATTTCTACTTTTAATTTTTTTGATGGGATTAATTTTTTACGC
AACGTATTATACAATACCTAAATTCTCCTTTGCTTCCGATAGTCTTGTTAAAGTTCTTCAGACAAAAGGTTGGATCGAAT
CGAATTTTCAGTCTCAAGAGATCTATTATTTAGGAAAAAAATTAGATCCAAATTTTAATTTTTTATTGGTTCAAACAATT
ATTTCTACAAAAGGGGAAAAGATTGGCCCTTTTCCATTTGCAAACACTTTGATCACTACACCTTTTGTTTGGATTGGACA
TCCAGAATGGATTTTATATTTATCAGCGTTTTTTTTTGGTTCATACTTAATCATTTTATATGCGATTTCAAAAAAATGGA
TTATTCCCATTATCGCAATGATTTCAACTCCTTTGTTTCATCATTTTATTTCTTTTTCAGACGTTTCCATAGCTGCTACA
CTGGTTTTGTTAGGAATTTTAATTCTACAAAATGAGAAATTGCTCTTTTCGAAAAATCATTCCGTGCAAACTTTCTTTTC
TGGAGTTTTATTGAGTATAGCTTGTTGGTATAGACAAGAAGTGTTTGTACTGACTTCGTGTTTGATCGTTTCCACACTTA
CAATTAAAGTTTTTTCAGAAAAGGAAGAACTAATTAAAGAATCTAAACAGATTTTAATTTTTTTAAGTGGATTTTTATTG
ATCTTTAGTATATTTATATTTTATAATTTTATAAATTATGGATTTTTATTAGGGCCTCGTATTATTCTAAATAAAACAAT
TACAAATTTTGATTTAACAAACAAGGTTTCAGACATTCAAAGTCTACTTTTTGCCGGAAAGGGACGTTTAGGATTTTTAG
GATATTCGCCCTGGTATCTTTTTATCTTTTTGCTTTTTATATGGAAATGGAAAAAAACAAGTCAATACGTTAAAATTTGG
ATACTTACCTTTGTTTTAAACTTAATTTTAGTCAGCATATTTACCCCTAACAATTCTAATATAGACTGGGGATCACGATA
TTTAACCTGTAGCGTTTTTATTCCACTTTTACTTTTAAGTGAAATTAAAATTTCGATGAACATCTTTTGGTCTTTTCGAA
AAAATTCAAAGTTTAAAAAAACATATGAAAATAAAGTAGAATTACCTAAAATTGAAAACATAGAAATAAAAGAAAATTAT
AAAAAAATAATATTATTTGGACTTTTAATTCTGATTCTGTATTCGATCAGTGTTAATTTTAAAATGATCCAATTAATGAG
AAAAATTTCAATTCAACTTTCTGAAATTCAGTCAGAAATTCCTTGGGACAATTCTAAAATTTTCATCACGTCAAAAAGCA
ATATTGCCAATACGTTCGGGCTCAATTATTTTTCTCAAACGATTCTACTGATCAAAAAACCAAAGGATTTAATACAAATC
CTACAATTACATCCTAACGAAAGATTCATTTTAATCGAAGATAAATTGGATAAACCTTGGTCAGAATCTATTAGAAATCA
ATTTGTAAATAAACTGAAAATCACTATAATTAAAAGTCCTAAAGTACATTTACGTTTCACGGAAATTCAATCCCGCTAA

Upstream 100 bases:

>100_bases
TTGGGTATCGGTGATCATTGAATATTTATATATTTTTTTGGCACTAAATTTGATTCAGACAAGTATGTAGAATGTTGGAA
AAGTTCTAATTTTATAAACA

Downstream 100 bases:

>100_bases
AAAACCTTTTTCGATTTGCCACGTTCAGGAAGATTTTTAAACATTGTCTTACGTTAATATGAAAAGTATCATAATGCAAA
AAAGTACGAGAAAGTATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKLKNLFLKYSIRFLLLIFLMGLIFYATYYTIPKFSFASDSLVKVLQTKGWIESNFQSQEIYYLGKKLDPNFNFLLVQTI
ISTKGEKIGPFPFANTLITTPFVWIGHPEWILYLSAFFFGSYLIILYAISKKWIIPIIAMISTPLFHHFISFSDVSIAAT
LVLLGILILQNEKLLFSKNHSVQTFFSGVLLSIACWYRQEVFVLTSCLIVSTLTIKVFSEKEELIKESKQILIFLSGFLL
IFSIFIFYNFINYGFLLGPRIILNKTITNFDLTNKVSDIQSLLFAGKGRLGFLGYSPWYLFIFLLFIWKWKKTSQYVKIW
ILTFVLNLILVSIFTPNNSNIDWGSRYLTCSVFIPLLLLSEIKISMNIFWSFRKNSKFKKTYENKVELPKIENIEIKENY
KKIILFGLLILILYSISVNFKMIQLMRKISIQLSEIQSEIPWDNSKIFITSKSNIANTFGLNYFSQTILLIKKPKDLIQI
LQLHPNERFILIEDKLDKPWSESIRNQFVNKLKITIIKSPKVHLRFTEIQSR

Sequences:

>Translated_532_residues
MKLKNLFLKYSIRFLLLIFLMGLIFYATYYTIPKFSFASDSLVKVLQTKGWIESNFQSQEIYYLGKKLDPNFNFLLVQTI
ISTKGEKIGPFPFANTLITTPFVWIGHPEWILYLSAFFFGSYLIILYAISKKWIIPIIAMISTPLFHHFISFSDVSIAAT
LVLLGILILQNEKLLFSKNHSVQTFFSGVLLSIACWYRQEVFVLTSCLIVSTLTIKVFSEKEELIKESKQILIFLSGFLL
IFSIFIFYNFINYGFLLGPRIILNKTITNFDLTNKVSDIQSLLFAGKGRLGFLGYSPWYLFIFLLFIWKWKKTSQYVKIW
ILTFVLNLILVSIFTPNNSNIDWGSRYLTCSVFIPLLLLSEIKISMNIFWSFRKNSKFKKTYENKVELPKIENIEIKENY
KKIILFGLLILILYSISVNFKMIQLMRKISIQLSEIQSEIPWDNSKIFITSKSNIANTFGLNYFSQTILLIKKPKDLIQI
LQLHPNERFILIEDKLDKPWSESIRNQFVNKLKITIIKSPKVHLRFTEIQSR
>Mature_532_residues
MKLKNLFLKYSIRFLLLIFLMGLIFYATYYTIPKFSFASDSLVKVLQTKGWIESNFQSQEIYYLGKKLDPNFNFLLVQTI
ISTKGEKIGPFPFANTLITTPFVWIGHPEWILYLSAFFFGSYLIILYAISKKWIIPIIAMISTPLFHHFISFSDVSIAAT
LVLLGILILQNEKLLFSKNHSVQTFFSGVLLSIACWYRQEVFVLTSCLIVSTLTIKVFSEKEELIKESKQILIFLSGFLL
IFSIFIFYNFINYGFLLGPRIILNKTITNFDLTNKVSDIQSLLFAGKGRLGFLGYSPWYLFIFLLFIWKWKKTSQYVKIW
ILTFVLNLILVSIFTPNNSNIDWGSRYLTCSVFIPLLLLSEIKISMNIFWSFRKNSKFKKTYENKVELPKIENIEIKENY
KKIILFGLLILILYSISVNFKMIQLMRKISIQLSEIQSEIPWDNSKIFITSKSNIANTFGLNYFSQTILLIKKPKDLIQI
LQLHPNERFILIEDKLDKPWSESIRNQFVNKLKITIIKSPKVHLRFTEIQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62238; Mature: 62238

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKNLFLKYSIRFLLLIFLMGLIFYATYYTIPKFSFASDSLVKVLQTKGWIESNFQSQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCCCE
IYYLGKKLDPNFNFLLVQTIISTKGEKIGPFPFANTLITTPFVWIGHPEWILYLSAFFFG
EEEECCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHH
SYLIILYAISKKWIIPIIAMISTPLFHHFISFSDVSIAATLVLLGILILQNEKLLFSKNH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCC
SVQTFFSGVLLSIACWYRQEVFVLTSCLIVSTLTIKVFSEKEELIKESKQILIFLSGFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH
IFSIFIFYNFINYGFLLGPRIILNKTITNFDLTNKVSDIQSLLFAGKGRLGFLGYSPWYL
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHH
FIFLLFIWKWKKTSQYVKIWILTFVLNLILVSIFTPNNSNIDWGSRYLTCSVFIPLLLLS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHH
EIKISMNIFWSFRKNSKFKKTYENKVELPKIENIEIKENYKKIILFGLLILILYSISVNF
HHHEEEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCH
KMIQLMRKISIQLSEIQSEIPWDNSKIFITSKSNIANTFGLNYFSQTILLIKKPKDLIQI
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCHHHHHCEEEEEECCHHHHHH
LQLHPNERFILIEDKLDKPWSESIRNQFVNKLKITIIKSPKVHLRFTEIQSR
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEEECCCEEEEEECCCCC
>Mature Secondary Structure
MKLKNLFLKYSIRFLLLIFLMGLIFYATYYTIPKFSFASDSLVKVLQTKGWIESNFQSQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCCCE
IYYLGKKLDPNFNFLLVQTIISTKGEKIGPFPFANTLITTPFVWIGHPEWILYLSAFFFG
EEEECCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHH
SYLIILYAISKKWIIPIIAMISTPLFHHFISFSDVSIAATLVLLGILILQNEKLLFSKNH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCC
SVQTFFSGVLLSIACWYRQEVFVLTSCLIVSTLTIKVFSEKEELIKESKQILIFLSGFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH
IFSIFIFYNFINYGFLLGPRIILNKTITNFDLTNKVSDIQSLLFAGKGRLGFLGYSPWYL
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHH
FIFLLFIWKWKKTSQYVKIWILTFVLNLILVSIFTPNNSNIDWGSRYLTCSVFIPLLLLS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHH
EIKISMNIFWSFRKNSKFKKTYENKVELPKIENIEIKENYKKIILFGLLILILYSISVNF
HHHEEEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCH
KMIQLMRKISIQLSEIQSEIPWDNSKIFITSKSNIANTFGLNYFSQTILLIKKPKDLIQI
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCHHHHHCEEEEEECCHHHHHH
LQLHPNERFILIEDKLDKPWSESIRNQFVNKLKITIIKSPKVHLRFTEIQSR
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA