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The map label for this gene is 45656378

Identifier: 45656378

GI number: 45656378

Start: 555303

End: 556838

Strand: Reverse

Name: 45656378

Synonym: LIC10480

Alternate gene names: NA

Gene position: 556838-555303 (Counterclockwise)

Preceding gene: 45656379

Following gene: 45656377

Centisome position: 13.02

GC content: 31.05

Gene sequence:

>1536_bases
ATGATACAGAAAATCAAAGAACAATGGGCAGTATTCATTTTAATCGTAGCCGTACCAATTTTACATATTGGAATCGGAAC
AGAAAATACTTATATCGCAGACTCCGCTTTAAAAGCAATGCAGACAGATTCTTTAATTCAAAATAATTTTCAATCCGAAG
AAATCAGATACCCCGCAGAAAAATTAGACCCGTTACACGAAGCATTTTTTCTTCCGGGAACAGGTTTTGCAAAAGAAATC
CAAGGCAAGTTTATCGGTCAGTATCCAATAGCATTCACCTTTCTTTCATCTTTCTTAAGACTGATAGGTATCACTTGGAA
ATGGGTTCCAATGCTTTTATCTTTTTTTATGATCGTTTCTCTTTATCTACTTTCAAAAAGAAAACTGATTGGTCAAAAGA
CTGTTTTACTTGGTTACTTTGCAACAATCCTTTTCGCGCTGTGTTTGGACTTTAGCGAATATTCTATATACTTTCTTTTT
AACTCCATAGGATTTTCTTTTTGGCTTCGTTATCGAGATTTGAAAAAATCCAGAGATCTTTACCTAGCCTTCTTCGTTTG
TTCGCTTCCAATTTGGTTTCGATTAGAAACATTGCTCTTCTTAGGAAGTTTAGTACTTTCTGAAATTATAATGTATAGAA
AAAATATAAAAAACTTAATAAAAGGAATAAATCCTTTAGGAATTCTACTTGGAATTCTTCCAATAATTTTATTTTTTCTT
TGGAATCTTTGGGATTATGGACATATATTAGGCGTAAGATTTATTTTTAACTATGGAATCGAACACGCATCCATTTTAGA
TAGAATTCATCGTTTTTTTTCAATTATATTCGTAAACTATGTAAATGGGGCTCCAAAATTCGGGCTATTTTTCTGTTCTT
CATTTTTATTACTTCCGGTTCTATATTATGTTTTTTTTAAAAACGAAAAAGATGAAAAAATCAATTTTCTGCTCTTGGTA
ATCGTTATAAATACAGTATTGGTAGGAATTCTAGCACCTAACGACGGTATTACGATTACAGGAAGATACCTCATTCTCAC
GATTATACCTTTATTAATCCTTTGGGAAACATGGAATTCTCAAATCTCTAAAAAGTGGAAAACAATTTCTGTAGTTTTAA
TTATTTTTTCGTTTTTTGTCTCTGGTCTAATTTTAGCAATAATGCAACACGCGATCAAACAGGAAAAAATATATAGGAAC
TTTTATGCACAGAACCAAAGTTCTGTTTGGATTTTTACGGATCCACTTCTATGCGGACAGGCCGGATCGGATCATCTTTC
TAAAAACATACTTTGTATCAACCCGAAAACAAATCTGGATCGAATTGTAAATAATCTTATAACAGAATCTTCGATTTCTT
CTTTGACTTTATTTGAGATGAGTGAAAAAGAATTTAAAAAATTTGAATATAAAATGCCTATGATTCTACCTTCCCAATCA
AAAACACTTTTAATAAAAAAGTTGGATTTAAATTTTAGAAAAGAAAAACGTTTAGAGTATAAAGGAATAATTTCCACTCG
TTACTATAAACCCTAA

Upstream 100 bases:

>100_bases
ACCATAAGACCCATTCGCTGAGTTTAACGAGACTATCTGTTGTATTGAGTTTTTTGAGATAGGTTTTTATATAAAGTCAT
ATTAAGGATTCAATAAAACG

Downstream 100 bases:

>100_bases
CTCTTTTCTTTCCATAATTAAAAATCAGAAAAACTAAAAAGAACTATTTCTTTAAAATTTTGCAAGATACTTAAAACTAA
TTTTTAAATTAATATGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MIQKIKEQWAVFILIVAVPILHIGIGTENTYIADSALKAMQTDSLIQNNFQSEEIRYPAEKLDPLHEAFFLPGTGFAKEI
QGKFIGQYPIAFTFLSSFLRLIGITWKWVPMLLSFFMIVSLYLLSKRKLIGQKTVLLGYFATILFALCLDFSEYSIYFLF
NSIGFSFWLRYRDLKKSRDLYLAFFVCSLPIWFRLETLLFLGSLVLSEIIMYRKNIKNLIKGINPLGILLGILPIILFFL
WNLWDYGHILGVRFIFNYGIEHASILDRIHRFFSIIFVNYVNGAPKFGLFFCSSFLLLPVLYYVFFKNEKDEKINFLLLV
IVINTVLVGILAPNDGITITGRYLILTIIPLLILWETWNSQISKKWKTISVVLIIFSFFVSGLILAIMQHAIKQEKIYRN
FYAQNQSSVWIFTDPLLCGQAGSDHLSKNILCINPKTNLDRIVNNLITESSISSLTLFEMSEKEFKKFEYKMPMILPSQS
KTLLIKKLDLNFRKEKRLEYKGIISTRYYKP

Sequences:

>Translated_511_residues
MIQKIKEQWAVFILIVAVPILHIGIGTENTYIADSALKAMQTDSLIQNNFQSEEIRYPAEKLDPLHEAFFLPGTGFAKEI
QGKFIGQYPIAFTFLSSFLRLIGITWKWVPMLLSFFMIVSLYLLSKRKLIGQKTVLLGYFATILFALCLDFSEYSIYFLF
NSIGFSFWLRYRDLKKSRDLYLAFFVCSLPIWFRLETLLFLGSLVLSEIIMYRKNIKNLIKGINPLGILLGILPIILFFL
WNLWDYGHILGVRFIFNYGIEHASILDRIHRFFSIIFVNYVNGAPKFGLFFCSSFLLLPVLYYVFFKNEKDEKINFLLLV
IVINTVLVGILAPNDGITITGRYLILTIIPLLILWETWNSQISKKWKTISVVLIIFSFFVSGLILAIMQHAIKQEKIYRN
FYAQNQSSVWIFTDPLLCGQAGSDHLSKNILCINPKTNLDRIVNNLITESSISSLTLFEMSEKEFKKFEYKMPMILPSQS
KTLLIKKLDLNFRKEKRLEYKGIISTRYYKP
>Mature_511_residues
MIQKIKEQWAVFILIVAVPILHIGIGTENTYIADSALKAMQTDSLIQNNFQSEEIRYPAEKLDPLHEAFFLPGTGFAKEI
QGKFIGQYPIAFTFLSSFLRLIGITWKWVPMLLSFFMIVSLYLLSKRKLIGQKTVLLGYFATILFALCLDFSEYSIYFLF
NSIGFSFWLRYRDLKKSRDLYLAFFVCSLPIWFRLETLLFLGSLVLSEIIMYRKNIKNLIKGINPLGILLGILPIILFFL
WNLWDYGHILGVRFIFNYGIEHASILDRIHRFFSIIFVNYVNGAPKFGLFFCSSFLLLPVLYYVFFKNEKDEKINFLLLV
IVINTVLVGILAPNDGITITGRYLILTIIPLLILWETWNSQISKKWKTISVVLIIFSFFVSGLILAIMQHAIKQEKIYRN
FYAQNQSSVWIFTDPLLCGQAGSDHLSKNILCINPKTNLDRIVNNLITESSISSLTLFEMSEKEFKKFEYKMPMILPSQS
KTLLIKKLDLNFRKEKRLEYKGIISTRYYKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59397; Mature: 59397

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEEEEEEECCCCCHHHCCHHHCCCCCCCCCC
>Mature Secondary Structure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CEEEEEEECCCCCHHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA