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The map label for this gene is 45656367

Identifier: 45656367

GI number: 45656367

Start: 541013

End: 541723

Strand: Reverse

Name: 45656367

Synonym: LIC10469

Alternate gene names: NA

Gene position: 541723-541013 (Counterclockwise)

Preceding gene: 45656368

Following gene: 45656366

Centisome position: 12.67

GC content: 31.22

Gene sequence:

>711_bases
ATGATTAACTCCTCCAATCACAGAAACAATTACCGTATAACAACCATAAGGTTAAAAATGAAAGTAGATCCGACAAAGTT
TATAAAACGAGAAGAAGCTCTTAAAGTATGGTTACGTAAAAATAACCAAAGTTTGTTTTTAGATAACATGGAAAGAATAC
TAAATGATCTTCCCAAAGAGGAAATTACGGAGAAATTTAAGTTCGGATTAAAATCAGCTCTTATACACTGCTGTCATGAT
CAAAAAATTAGAGAGTTAAATTTTATCTGGCACAACGTATCCGATCATGTCTCCCCTGCTTATGCCGTTGGAAAAGATTT
AGTTGTAGATCATCAAATTCATACTGAAAATCATTTTGACTCTCTTAAAGAAATTCCAAAAATTGAAACTATATCAAATC
ACGGAGTTACAATTGAATTGGATTTTTCGCTACCAACTGACGTTGCCATTAATAGTTATATAAAAAATTTGCTTCCTGAA
ATTTTAGATATGGCAATGAGATTAGATGATCATCGCATCCGATGGAACATTGTAGAATCTTTTACAGACATAGTTCATAT
TTGGAATTATAAAATCGGATTTGAAGTTTGTGAAGAATTAAATCATAAAAATACCAGATTGAACGAACTAAAACTTCAGT
CCCCTTTTTGGATTACTTTAAACGAATTTGATCGATGGCCCGTACCCATTTTTGTATTTTCAGATTTTTAA

Upstream 100 bases:

>100_bases
TTGGGACGGCTCCTAAGTTATGTTTTGGGAGTAGCTCGTTGAGTTTGCACAGGATCGGGCTAAGGCCTTCGGTATAACTT
TTTCTTACGGAAAAAGTTAT

Downstream 100 bases:

>100_bases
ATTTAGAAACGGTTTCTTAATCTTATATTTTATTTCTAATCATACTTAATAACAATTTCTTAATGTATAAATTTCTTAAA
TATTCCTGCATCCTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MINSSNHRNNYRITTIRLKMKVDPTKFIKREEALKVWLRKNNQSLFLDNMERILNDLPKEEITEKFKFGLKSALIHCCHD
QKIRELNFIWHNVSDHVSPAYAVGKDLVVDHQIHTENHFDSLKEIPKIETISNHGVTIELDFSLPTDVAINSYIKNLLPE
ILDMAMRLDDHRIRWNIVESFTDIVHIWNYKIGFEVCEELNHKNTRLNELKLQSPFWITLNEFDRWPVPIFVFSDF

Sequences:

>Translated_236_residues
MINSSNHRNNYRITTIRLKMKVDPTKFIKREEALKVWLRKNNQSLFLDNMERILNDLPKEEITEKFKFGLKSALIHCCHD
QKIRELNFIWHNVSDHVSPAYAVGKDLVVDHQIHTENHFDSLKEIPKIETISNHGVTIELDFSLPTDVAINSYIKNLLPE
ILDMAMRLDDHRIRWNIVESFTDIVHIWNYKIGFEVCEELNHKNTRLNELKLQSPFWITLNEFDRWPVPIFVFSDF
>Mature_236_residues
MINSSNHRNNYRITTIRLKMKVDPTKFIKREEALKVWLRKNNQSLFLDNMERILNDLPKEEITEKFKFGLKSALIHCCHD
QKIRELNFIWHNVSDHVSPAYAVGKDLVVDHQIHTENHFDSLKEIPKIETISNHGVTIELDFSLPTDVAINSYIKNLLPE
ILDMAMRLDDHRIRWNIVESFTDIVHIWNYKIGFEVCEELNHKNTRLNELKLQSPFWITLNEFDRWPVPIFVFSDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28081; Mature: 28081

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSSNHRNNYRITTIRLKMKVDPTKFIKREEALKVWLRKNNQSLFLDNMERILNDLPKE
CCCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHH
EITEKFKFGLKSALIHCCHDQKIRELNFIWHNVSDHVSPAYAVGKDLVVDHQIHTENHFD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCHHHHCCCCEEEECEECCCHHHH
SLKEIPKIETISNHGVTIELDFSLPTDVAINSYIKNLLPEILDMAMRLDDHRIRWNIVES
HHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
FTDIVHIWNYKIGFEVCEELNHKNTRLNELKLQSPFWITLNEFDRWPVPIFVFSDF
HHHHHHHHCCHHHHHHHHHCCCCCCCHHEEEECCCEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MINSSNHRNNYRITTIRLKMKVDPTKFIKREEALKVWLRKNNQSLFLDNMERILNDLPKE
CCCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHH
EITEKFKFGLKSALIHCCHDQKIRELNFIWHNVSDHVSPAYAVGKDLVVDHQIHTENHFD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCHHHHCCCCEEEECEECCCHHHH
SLKEIPKIETISNHGVTIELDFSLPTDVAINSYIKNLLPEILDMAMRLDDHRIRWNIVES
HHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
FTDIVHIWNYKIGFEVCEELNHKNTRLNELKLQSPFWITLNEFDRWPVPIFVFSDF
HHHHHHHHCCHHHHHHHHHCCCCCCCHHEEEECCCEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA