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The map label for this gene is 45656272

Identifier: 45656272

GI number: 45656272

Start: 418037

End: 419479

Strand: Reverse

Name: 45656272

Synonym: LIC10371

Alternate gene names: NA

Gene position: 419479-418037 (Counterclockwise)

Preceding gene: 45656273

Following gene: 45656271

Centisome position: 9.81

GC content: 36.52

Gene sequence:

>1443_bases
TTGATTCGTTTGATAATTCTAATTTTTATAATATTCTTTCAGGCTTGTTCGCCCACTTCTGGCAAAGAGATAAAAAACTT
TTTAATTCCTTTGGTCCAAGGAAATGGGATTGGGCCTATTGCAATTCACGAAAATTTAGATTCTTTAGATCCGGAAGAAA
TACCATTTCGAGAAAATCTTGTAAACTTTGAGTGGGCTTTGTTATACGGAGATCATCTTAAACTGACCAAAGACTCTCAC
CTTGCAGTCGATGATAATGGTTTTATCTACATCGCAGCTGATACGGATGGCAATCCATTTTATGACAATTCTGTCCATAG
ACTAATAACAGGTAAAAAGTTAGTTCTTGGAAAGTATGATTCTCAGAAAAATGAAATCTGGACTCATGAATTGGAAAATC
CCTATGTAAACCTTGACGTCACTGGAATTGCAGTCGATACAAAAGGAAACGCCTATGTAACCGGTTCTTCCACAATAAAA
AATTATTTTGAAAAATCACGTATAGAAAAAAAACAATTTCTGTTTGTAATTAAAATCAATTCGGAAGGAAATTTAGAATG
GATCAGAGAAATAGGATCGTCTAACGACGCGTACAAAGTTAATCCCAGAACCATAGCAGTAGATACATTAGGAAATTCTT
ATGTTGTTGGAACTTCTAACGGACCATTCGAAGGAGACAGCGTAAAACCGGAAAGTGGATTTATTACCAAATTTGATACG
AACGGAAACCAGGTTTGGGTAAAAGAGCTTTCCGCCTTAGAAGCAAAAATAACTCCAACTAGTGTCGCTTTTGATAAACG
ATCGGGAAATATTTATTTATGTGGTTCGGCAAACAACAATAACATTAGAAACGATAAGAATCCAAGAATCGGAAGAAATG
ATCTTCTCGTTTTTAAATATGATGAAAACGGCAATGGACAAATTTTTGCACGATTAGGTTTTGCTCTGGGATCGGTTTTC
GGCAATACAATTACGACAGATCCACTTGGAAATGTCCTAGTAGGCGCGTACACAGACGTAGATTTCGCCTCAAGTACAAT
TCAAGACAATAGTCACAATGGACTGATCATCAAATACGATTCGTCCGGAGCACAAAAATGGATCAGACAATTTGGTCCGA
GCACACCTTTAAAATCTACCTTTATCAGTGAAATAACCACAGACAGATTAGGTAACGTTTTTACAACCGGTTCAACCAAT
GGATTTATCAAGTTTAATGACGGTCCTTCGGAAGGAAACAGAGACGTCTTTGTAACAAAACATAGTTCTTCGGGAGACGT
TTTAAAACTCTGGCAATGGGGAGTTCAACAAAAAACTATGATTGGTTCTGGAATCGGAGCCGATTTTAATGGAAATCTTT
ATGCTACTGGGTGGACAGACGGCGAATTATTCGAAAATCGCAATATAGGAAAAATAGACATATTTCTTATAAAATTCCAA
TAA

Upstream 100 bases:

>100_bases
TTTTAGTCAAAAAATAGAAAGTATACTGTGGCTTATACTAAAATCTCAAATAAATAAAAACATACAAATATTGAGATAAT
TCTTAGGTGGAGAGAAAACT

Downstream 100 bases:

>100_bases
TTTTATATTCAGGATCTATGATAAATAAATATTCATTTGATCCTGATTCTTTTTTCATAATCAGAAATATACTATATAAC
TTTATCAATCATACAATATA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNGIGPIAIHENLDSLDPEEIPFRENLVNFEWALLYGDHLKLTKDSH
LAVDDNGFIYIAADTDGNPFYDNSVHRLITGKKLVLGKYDSQKNEIWTHELENPYVNLDVTGIAVDTKGNAYVTGSSTIK
NYFEKSRIEKKQFLFVIKINSEGNLEWIREIGSSNDAYKVNPRTIAVDTLGNSYVVGTSNGPFEGDSVKPESGFITKFDT
NGNQVWVKELSALEAKITPTSVAFDKRSGNIYLCGSANNNNIRNDKNPRIGRNDLLVFKYDENGNGQIFARLGFALGSVF
GNTITTDPLGNVLVGAYTDVDFASSTIQDNSHNGLIIKYDSSGAQKWIRQFGPSTPLKSTFISEITTDRLGNVFTTGSTN
GFIKFNDGPSEGNRDVFVTKHSSSGDVLKLWQWGVQQKTMIGSGIGADFNGNLYATGWTDGELFENRNIGKIDIFLIKFQ

Sequences:

>Translated_480_residues
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNGIGPIAIHENLDSLDPEEIPFRENLVNFEWALLYGDHLKLTKDSH
LAVDDNGFIYIAADTDGNPFYDNSVHRLITGKKLVLGKYDSQKNEIWTHELENPYVNLDVTGIAVDTKGNAYVTGSSTIK
NYFEKSRIEKKQFLFVIKINSEGNLEWIREIGSSNDAYKVNPRTIAVDTLGNSYVVGTSNGPFEGDSVKPESGFITKFDT
NGNQVWVKELSALEAKITPTSVAFDKRSGNIYLCGSANNNNIRNDKNPRIGRNDLLVFKYDENGNGQIFARLGFALGSVF
GNTITTDPLGNVLVGAYTDVDFASSTIQDNSHNGLIIKYDSSGAQKWIRQFGPSTPLKSTFISEITTDRLGNVFTTGSTN
GFIKFNDGPSEGNRDVFVTKHSSSGDVLKLWQWGVQQKTMIGSGIGADFNGNLYATGWTDGELFENRNIGKIDIFLIKFQ
>Mature_480_residues
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNGIGPIAIHENLDSLDPEEIPFRENLVNFEWALLYGDHLKLTKDSH
LAVDDNGFIYIAADTDGNPFYDNSVHRLITGKKLVLGKYDSQKNEIWTHELENPYVNLDVTGIAVDTKGNAYVTGSSTIK
NYFEKSRIEKKQFLFVIKINSEGNLEWIREIGSSNDAYKVNPRTIAVDTLGNSYVVGTSNGPFEGDSVKPESGFITKFDT
NGNQVWVKELSALEAKITPTSVAFDKRSGNIYLCGSANNNNIRNDKNPRIGRNDLLVFKYDENGNGQIFARLGFALGSVF
GNTITTDPLGNVLVGAYTDVDFASSTIQDNSHNGLIIKYDSSGAQKWIRQFGPSTPLKSTFISEITTDRLGNVFTTGSTN
GFIKFNDGPSEGNRDVFVTKHSSSGDVLKLWQWGVQQKTMIGSGIGADFNGNLYATGWTDGELFENRNIGKIDIFLIKFQ

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53130; Mature: 53130

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNGIGPIAIHENLDSLDPEEIPFRENL
CHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCEEEEECCCCCCCCCCCCHHHCC
VNFEWALLYGDHLKLTKDSHLAVDDNGFIYIAADTDGNPFYDNSVHRLITGKKLVLGKYD
CCEEEEEEECCEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEECCC
SQKNEIWTHELENPYVNLDVTGIAVDTKGNAYVTGSSTIKNYFEKSRIEKKQFLFVIKIN
CCCCCEEEEECCCCEEEEEEEEEEEECCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEC
SEGNLEWIREIGSSNDAYKVNPRTIAVDTLGNSYVVGTSNGPFEGDSVKPESGFITKFDT
CCCCHHHHHHHCCCCCCEEECCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEC
NGNQVWVKELSALEAKITPTSVAFDKRSGNIYLCGSANNNNIRNDKNPRIGRNDLLVFKY
CCCEEEEEEHHHHEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEE
DENGNGQIFARLGFALGSVFGNTITTDPLGNVLVGAYTDVDFASSTIQDNSHNGLIIKYD
CCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCCEEEEEC
SSGAQKWIRQFGPSTPLKSTFISEITTDRLGNVFTTGSTNGFIKFNDGPSEGNRDVFVTK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCEEEEEE
HSSSGDVLKLWQWGVQQKTMIGSGIGADFNGNLYATGWTDGELFENRNIGKIDIFLIKFQ
ECCCCCEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNGIGPIAIHENLDSLDPEEIPFRENL
CHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCEEEEECCCCCCCCCCCCHHHCC
VNFEWALLYGDHLKLTKDSHLAVDDNGFIYIAADTDGNPFYDNSVHRLITGKKLVLGKYD
CCEEEEEEECCEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEECCC
SQKNEIWTHELENPYVNLDVTGIAVDTKGNAYVTGSSTIKNYFEKSRIEKKQFLFVIKIN
CCCCCEEEEECCCCEEEEEEEEEEEECCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEC
SEGNLEWIREIGSSNDAYKVNPRTIAVDTLGNSYVVGTSNGPFEGDSVKPESGFITKFDT
CCCCHHHHHHHCCCCCCEEECCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEC
NGNQVWVKELSALEAKITPTSVAFDKRSGNIYLCGSANNNNIRNDKNPRIGRNDLLVFKY
CCCEEEEEEHHHHEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEE
DENGNGQIFARLGFALGSVFGNTITTDPLGNVLVGAYTDVDFASSTIQDNSHNGLIIKYD
CCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCCEEEEEC
SSGAQKWIRQFGPSTPLKSTFISEITTDRLGNVFTTGSTNGFIKFNDGPSEGNRDVFVTK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCEEEEEE
HSSSGDVLKLWQWGVQQKTMIGSGIGADFNGNLYATGWTDGELFENRNIGKIDIFLIKFQ
ECCCCCEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA