Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410249
Identifier: 41410249
GI number: 41410249
Start: 4629536
End: 4630168
Strand: Reverse
Name: 41410249
Synonym: MAP4151c
Alternate gene names: NA
Gene position: 4630168-4629536 (Counterclockwise)
Preceding gene: 41410270
Following gene: 41410248
Centisome position: 95.87
GC content: 68.09
Gene sequence:
>633_bases ATGGCATCGAGTGCCGAAATGGAAGGGCCGGGGTCCGGGATGCCGCAGCAGCGGGTGGGCAGGCGCCGCTCGACCACGCC GCACCACATCACCGACGTCGCCATCGACCTGTTCACCGCCCGGGGTTTCGCCGAGGTCAGCGTGGACGACGTCGCGGCGG CCGCCGGCATCTCGCGGCGCACCCTGTTCCGCTACTACGCCTCCAAGAACGCCATCCCCTGGGGCGATTTCGACACTCAT TTGGCCCGGCTGCGCGAGTTGCTGGACAACGTCGAATCCCGGGTACCGCTGGGCGATGCGCTGCGCACCGCGTTGTTGGC CTTCAACACCTTTGACGAATCCGAGACCGCGCGGCACCGACAGCGCATGCGCGTCATCCTGCAAACCGCTGAGCTGCAAG CGTATTCGATGACGATGTACGCCGGATGGCGCGAGGTGATCGCCGGGTTCGTGGCCCGCCGCTGCGAGTGCAAGACGACC GACCTGGCGCCCCAGACCGTCGCCTGGATGATGCTGGGGGTGGCGCTGTCGGCCTACGAGCATTGGCTGGGCGATGAGTC AGTGCCGTTGCCGGTGGCCCTGGGCAACGCCTTCGACGTGGTCGGCGCCGGGCTGAACGGGCTGGACCGGTGA
Upstream 100 bases:
>100_bases GTGACGAGTTGGGCGTCGGTTTCGGTCTCGTGCTCCACGGGGCCTTGCCTTTCCTGCGGTCTTGACGACGATGGGTCTGA GTCACACTCGCGGCCAGAAT
Downstream 100 bases:
>100_bases GCGTCGAGCACCTGGTGCACATGCTGCGGGCGCAGGGCAGCTTCTGCGCCTCCTCGGGCTCGCCGATGTACGGCGACCTG TTCGAACTGGTGGCCTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; Transcriptional Regulatory Protein TetR; Transcriptional Regulator TetR Family; AcrR Family Transcriptional Regulator; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRRTLFRYYASKNAIPWGDFDTH LARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHRQRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTT DLAPQTVAWMMLGVALSAYEHWLGDESVPLPVALGNAFDVVGAGLNGLDR
Sequences:
>Translated_210_residues MASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRRTLFRYYASKNAIPWGDFDTH LARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHRQRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTT DLAPQTVAWMMLGVALSAYEHWLGDESVPLPVALGNAFDVVGAGLNGLDR >Mature_209_residues ASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRRTLFRYYASKNAIPWGDFDTHL ARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHRQRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTTD LAPQTVAWMMLGVALSAYEHWLGDESVPLPVALGNAFDVVGAGLNGLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23132; Mature: 23000
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRR CCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH TLFRYYASKNAIPWGDFDTHLARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH QRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTTDLAPQTVAWMMLGVALSAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH HWLGDESVPLPVALGNAFDVVGAGLNGLDR HHCCCCCCCCEEECCCHHHHHHCCCCCCCC >Mature Secondary Structure ASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRR CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH TLFRYYASKNAIPWGDFDTHLARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH QRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTTDLAPQTVAWMMLGVALSAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH HWLGDESVPLPVALGNAFDVVGAGLNGLDR HHCCCCCCCCEEECCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA