Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410249

Identifier: 41410249

GI number: 41410249

Start: 4629536

End: 4630168

Strand: Reverse

Name: 41410249

Synonym: MAP4151c

Alternate gene names: NA

Gene position: 4630168-4629536 (Counterclockwise)

Preceding gene: 41410270

Following gene: 41410248

Centisome position: 95.87

GC content: 68.09

Gene sequence:

>633_bases
ATGGCATCGAGTGCCGAAATGGAAGGGCCGGGGTCCGGGATGCCGCAGCAGCGGGTGGGCAGGCGCCGCTCGACCACGCC
GCACCACATCACCGACGTCGCCATCGACCTGTTCACCGCCCGGGGTTTCGCCGAGGTCAGCGTGGACGACGTCGCGGCGG
CCGCCGGCATCTCGCGGCGCACCCTGTTCCGCTACTACGCCTCCAAGAACGCCATCCCCTGGGGCGATTTCGACACTCAT
TTGGCCCGGCTGCGCGAGTTGCTGGACAACGTCGAATCCCGGGTACCGCTGGGCGATGCGCTGCGCACCGCGTTGTTGGC
CTTCAACACCTTTGACGAATCCGAGACCGCGCGGCACCGACAGCGCATGCGCGTCATCCTGCAAACCGCTGAGCTGCAAG
CGTATTCGATGACGATGTACGCCGGATGGCGCGAGGTGATCGCCGGGTTCGTGGCCCGCCGCTGCGAGTGCAAGACGACC
GACCTGGCGCCCCAGACCGTCGCCTGGATGATGCTGGGGGTGGCGCTGTCGGCCTACGAGCATTGGCTGGGCGATGAGTC
AGTGCCGTTGCCGGTGGCCCTGGGCAACGCCTTCGACGTGGTCGGCGCCGGGCTGAACGGGCTGGACCGGTGA

Upstream 100 bases:

>100_bases
GTGACGAGTTGGGCGTCGGTTTCGGTCTCGTGCTCCACGGGGCCTTGCCTTTCCTGCGGTCTTGACGACGATGGGTCTGA
GTCACACTCGCGGCCAGAAT

Downstream 100 bases:

>100_bases
GCGTCGAGCACCTGGTGCACATGCTGCGGGCGCAGGGCAGCTTCTGCGCCTCCTCGGGCTCGCCGATGTACGGCGACCTG
TTCGAACTGGTGGCCTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; Transcriptional Regulatory Protein TetR; Transcriptional Regulator TetR Family; AcrR Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRRTLFRYYASKNAIPWGDFDTH
LARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHRQRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTT
DLAPQTVAWMMLGVALSAYEHWLGDESVPLPVALGNAFDVVGAGLNGLDR

Sequences:

>Translated_210_residues
MASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRRTLFRYYASKNAIPWGDFDTH
LARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHRQRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTT
DLAPQTVAWMMLGVALSAYEHWLGDESVPLPVALGNAFDVVGAGLNGLDR
>Mature_209_residues
ASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRRTLFRYYASKNAIPWGDFDTHL
ARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHRQRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTTD
LAPQTVAWMMLGVALSAYEHWLGDESVPLPVALGNAFDVVGAGLNGLDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23132; Mature: 23000

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRR
CCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
TLFRYYASKNAIPWGDFDTHLARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
QRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTTDLAPQTVAWMMLGVALSAYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
HWLGDESVPLPVALGNAFDVVGAGLNGLDR
HHCCCCCCCCEEECCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASSAEMEGPGSGMPQQRVGRRRSTTPHHITDVAIDLFTARGFAEVSVDDVAAAAGISRR
CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
TLFRYYASKNAIPWGDFDTHLARLRELLDNVESRVPLGDALRTALLAFNTFDESETARHR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
QRMRVILQTAELQAYSMTMYAGWREVIAGFVARRCECKTTDLAPQTVAWMMLGVALSAYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
HWLGDESVPLPVALGNAFDVVGAGLNGLDR
HHCCCCCCCCEEECCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA