Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410248
Identifier: 41410248
GI number: 41410248
Start: 4628496
End: 4629539
Strand: Reverse
Name: 41410248
Synonym: MAP4150c
Alternate gene names: NA
Gene position: 4629539-4628496 (Counterclockwise)
Preceding gene: 41410249
Following gene: 41410246
Centisome position: 95.85
GC content: 75.57
Gene sequence:
>1044_bases GTGAGCGTCGAGCACCTGGTGCACATGCTGCGGGCGCAGGGCAGCTTCTGCGCCTCCTCGGGCTCGCCGATGTACGGCGA CCTGTTCGAACTGGTGGCCTCCGACGTCGAGGCCGGCGGGGTGTTCGCCGACATCCTGTCCGGGCACCGGGACGCCCCGT CGCGCGACGCGATTCCGCTGCGGCTGCTCGGTGGCCTGCACCGACTGGTGCTCGATGGCCGCGCCGGCTCCCTGCGCCGC TGGTATCCCAGCACCGGCGGCAGCTGGGACGCCGGGGCGGCGTGGCCGCCGATCCTGGCCGCCGCGGCCGAGCACGCCGC CGCGCTGCGCGCGGCGCTGGACCGCCCACCGCAGACCAACGAGGTGGGCCGGTCGGCCGCGCTGATCGGCGGGCTGCTGC ACATCAATGAATCCTGTTTGCCGGTAAGACTTTTCGAGATCGGGTCGAGCGCGGGGCTGAACCTGCGGGCCGACCACTAC CGGTACCGGTATGCCGGCGGCGGGTGGGGACCGGCCGACTCGCCGGTTTGCATCGACGACGCCTGGCGCGGCGCGCTGCC GCCGGCGCGCGGGGTGCGGATCGTCGAGCGGCACGGCTTCGACATCGCGCCCGTCGACGTCGGGAACCCCGACGGTGAGC TGACGGTGCTGAGCTACGTCTGGCCCGACCAGGCCGCGCGGCTGGCGCGGCTGCGCGGCGCCATCGAGGTCGCCCGCCGG GTCCCGGCCACCCTCGAGCGCCGGACGGCGGCCGACGCCGTCGGGCGCCTGAGCCTCGCCGAGGGCGCGTTGACCGTGCT GTGGCACTCGATCACCTGGCAGTACCTGTCCGCCGGGGAACGCGCCGCGGTGTGCGCCGGGGTGGACGCGCTGGGCGCAC GGGCCGGCGCGTCCGCCCCGTTGGTCCACCTGACCATGGAGCCGGCCCGGGACGGGCCGGGCGCACCGATCAGGTTCCTG GTGCGCGCCCGCGGCTGGCCGGACGGCGGGCCGCGCGTGCTGGCACAGTGCCATCCGCACGGCCCGCCGGTCGACTGGCT CTAA
Upstream 100 bases:
>100_bases CGGCCTACGAGCATTGGCTGGGCGATGAGTCAGTGCCGTTGCCGGTGGCCCTGGGCAACGCCTTCGACGTGGTCGGCGCC GGGCTGAACGGGCTGGACCG
Downstream 100 bases:
>100_bases AAGCCAAGGGGCGCTGGGGTTTTCGCGAAACCGTCAGGTCCCCATGAAGGTCATCGGGTCGTGCAGCACCCGGGTGCCGT CGTGCAGTCCCTCGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSVEHLVHMLRAQGSFCASSGSPMYGDLFELVASDVEAGGVFADILSGHRDAPSRDAIPLRLLGGLHRLVLDGRAGSLRR WYPSTGGSWDAGAAWPPILAAAAEHAAALRAALDRPPQTNEVGRSAALIGGLLHINESCLPVRLFEIGSSAGLNLRADHY RYRYAGGGWGPADSPVCIDDAWRGALPPARGVRIVERHGFDIAPVDVGNPDGELTVLSYVWPDQAARLARLRGAIEVARR VPATLERRTAADAVGRLSLAEGALTVLWHSITWQYLSAGERAAVCAGVDALGARAGASAPLVHLTMEPARDGPGAPIRFL VRARGWPDGGPRVLAQCHPHGPPVDWL
Sequences:
>Translated_347_residues MSVEHLVHMLRAQGSFCASSGSPMYGDLFELVASDVEAGGVFADILSGHRDAPSRDAIPLRLLGGLHRLVLDGRAGSLRR WYPSTGGSWDAGAAWPPILAAAAEHAAALRAALDRPPQTNEVGRSAALIGGLLHINESCLPVRLFEIGSSAGLNLRADHY RYRYAGGGWGPADSPVCIDDAWRGALPPARGVRIVERHGFDIAPVDVGNPDGELTVLSYVWPDQAARLARLRGAIEVARR VPATLERRTAADAVGRLSLAEGALTVLWHSITWQYLSAGERAAVCAGVDALGARAGASAPLVHLTMEPARDGPGAPIRFL VRARGWPDGGPRVLAQCHPHGPPVDWL >Mature_346_residues SVEHLVHMLRAQGSFCASSGSPMYGDLFELVASDVEAGGVFADILSGHRDAPSRDAIPLRLLGGLHRLVLDGRAGSLRRW YPSTGGSWDAGAAWPPILAAAAEHAAALRAALDRPPQTNEVGRSAALIGGLLHINESCLPVRLFEIGSSAGLNLRADHYR YRYAGGGWGPADSPVCIDDAWRGALPPARGVRIVERHGFDIAPVDVGNPDGELTVLSYVWPDQAARLARLRGAIEVARRV PATLERRTAADAVGRLSLAEGALTVLWHSITWQYLSAGERAAVCAGVDALGARAGASAPLVHLTMEPARDGPGAPIRFLV RARGWPDGGPRVLAQCHPHGPPVDWL
Specific function: Unknown
COG id: COG4427
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36756; Mature: 36625
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEHLVHMLRAQGSFCASSGSPMYGDLFELVASDVEAGGVFADILSGHRDAPSRDAIPL CCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHH RLLGGLHRLVLDGRAGSLRRWYPSTGGSWDAGAAWPPILAAAAEHAAALRAALDRPPQTN HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EVGRSAALIGGLLHINESCLPVRLFEIGSSAGLNLRADHYRYRYAGGGWGPADSPVCIDD HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCCEEECC AWRGALPPARGVRIVERHGFDIAPVDVGNPDGELTVLSYVWPDQAARLARLRGAIEVARR CCCCCCCCHHCEEEEECCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH VPATLERRTAADAVGRLSLAEGALTVLWHSITWQYLSAGERAAVCAGVDALGARAGASAP CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCC LVHLTMEPARDGPGAPIRFLVRARGWPDGGPRVLAQCHPHGPPVDWL EEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure SVEHLVHMLRAQGSFCASSGSPMYGDLFELVASDVEAGGVFADILSGHRDAPSRDAIPL CHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHH RLLGGLHRLVLDGRAGSLRRWYPSTGGSWDAGAAWPPILAAAAEHAAALRAALDRPPQTN HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EVGRSAALIGGLLHINESCLPVRLFEIGSSAGLNLRADHYRYRYAGGGWGPADSPVCIDD HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCCEEECC AWRGALPPARGVRIVERHGFDIAPVDVGNPDGELTVLSYVWPDQAARLARLRGAIEVARR CCCCCCCCHHCEEEEECCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH VPATLERRTAADAVGRLSLAEGALTVLWHSITWQYLSAGERAAVCAGVDALGARAGASAP CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCC LVHLTMEPARDGPGAPIRFLVRARGWPDGGPRVLAQCHPHGPPVDWL EEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA