Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is phoS2_3
Identifier: 41410270
GI number: 41410270
Start: 4645850
End: 4646974
Strand: Reverse
Name: phoS2_3
Synonym: MAP4172c
Alternate gene names: 41410270
Gene position: 4646974-4645850 (Counterclockwise)
Preceding gene: 41410285
Following gene: 41410249
Centisome position: 96.22
GC content: 69.16
Gene sequence:
>1125_bases ATGCGCACCCGATCGGCGGTCATCGCCGGCGTGCTGATGGCAACCACCCTGGTGGTCTCGGCGTGCGGCGAGACGCCCGC CAGCCTGCCCTACACCGCCGGCGCCAAGGTCGATTGCGGCGGCAAGCAGACCCTGTCCGCCAGCGGCTCCACCGCGCAGG CCAACGCGATGACCCGGTTCATCGCCGCCTACCGGACCGCGTGCCCGGGACAGACGCTCGACTACACCGCCAACGGGTCG GGCAACGGAATCGGTGACTTCCTCGCGGGCAGAACGGATTTCGCGGGGTCGGACACACCGTTGTCGGGCGACCAGTATGC CGCCGCCAAGCGACGCTGCGGCGGAGCCGACGCCTGGAACCTGCCGGTGGTGTTCGGTCCGCTGGCCATCACCTACAACC TGGCCGCGGTCGACTCGCTGGTGCTCGACGCGCCCACCCTGGCCAAGATCTTCAACGGCACCATCACCCGCTGGGACGAT CCGGCCCTGGCCCTGCTCAACGCCTCCATGCCGGCCGAGGACATTCGCGTCGTCTACCGCAGCGACGGCTCGGGCACCAC CGACAACTTCCAGGCCTACCTGCAGTCGGCCGCCGGCGGAGTGTGGAACAAGGGCGCGGGCAAGACCTTCAACGGCGGCG TGGGCACCGGCGCCGTCGGCAACACCGGCACCGCCGCGGCCGTCAAGAGCACCGAGGGTGCCATCAGCTACAACGAATTG TCCTTCGCGCTGCAGCAGGGCCTGTTCGCCGCCGAGATCAAGACGCCGGCGAGCCGCCGATCGCTGCGTCCGGTGCGGAT CGGCACCGACATCTTCGGCAAGACGATCAAGGGCGCCCGGATCGTCGGCACCGGCAACGACCTGGTGCTCGACCTGTCGT CGTTCTACAACCCCGCCCAGCCCGACGTCTACCCGATCGTGCTGGCCACCTACGAGATCGTGTGCTCGAAATACCCGGGC TTCGACGTGGCCAAGGCGGTCAAGGCGTTCCTGCAGGCCGCCATCGGGCCCGGGCAGGTCGAGTTGGCCAGGACCGGCTA CATCCCGCTGTCGGCGGACTTTCAAGCCAAGGTGTCCGGCGCCGTCGACGCGATCAGCTCACCGCAGGCGCCCAACCCGG ACTGA
Upstream 100 bases:
>100_bases CCCGGCGGGGACGGCGCACTCGTTCATCCGACGTTTGTTTGCCTGTTCATCCGGTCGCGGTACATCTCGGTACCCGGACT GTCAAGGAGCCCTCGTCGTG
Downstream 100 bases:
>100_bases CCGTCGCGGCTTCAGTCCCGCGAAAAGGCAAGGGCGATCTCGGTTTCCACGTCGCGATAGGGCCGGCCGGACAGGTCGAG GGTGACCCGGGCGATGGTGC
Product: PhoS2_3
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 3; PstS-3; Antigen Ag88 [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRTRSAVIAGVLMATTLVVSACGETPASLPYTAGAKVDCGGKQTLSASGSTAQANAMTRFIAAYRTACPGQTLDYTANGS GNGIGDFLAGRTDFAGSDTPLSGDQYAAAKRRCGGADAWNLPVVFGPLAITYNLAAVDSLVLDAPTLAKIFNGTITRWDD PALALLNASMPAEDIRVVYRSDGSGTTDNFQAYLQSAAGGVWNKGAGKTFNGGVGTGAVGNTGTAAAVKSTEGAISYNEL SFALQQGLFAAEIKTPASRRSLRPVRIGTDIFGKTIKGARIVGTGNDLVLDLSSFYNPAQPDVYPIVLATYEIVCSKYPG FDVAKAVKAFLQAAIGPGQVELARTGYIPLSADFQAKVSGAVDAISSPQAPNPD
Sequences:
>Translated_374_residues MRTRSAVIAGVLMATTLVVSACGETPASLPYTAGAKVDCGGKQTLSASGSTAQANAMTRFIAAYRTACPGQTLDYTANGS GNGIGDFLAGRTDFAGSDTPLSGDQYAAAKRRCGGADAWNLPVVFGPLAITYNLAAVDSLVLDAPTLAKIFNGTITRWDD PALALLNASMPAEDIRVVYRSDGSGTTDNFQAYLQSAAGGVWNKGAGKTFNGGVGTGAVGNTGTAAAVKSTEGAISYNEL SFALQQGLFAAEIKTPASRRSLRPVRIGTDIFGKTIKGARIVGTGNDLVLDLSSFYNPAQPDVYPIVLATYEIVCSKYPG FDVAKAVKAFLQAAIGPGQVELARTGYIPLSADFQAKVSGAVDAISSPQAPNPD >Mature_374_residues MRTRSAVIAGVLMATTLVVSACGETPASLPYTAGAKVDCGGKQTLSASGSTAQANAMTRFIAAYRTACPGQTLDYTANGS GNGIGDFLAGRTDFAGSDTPLSGDQYAAAKRRCGGADAWNLPVVFGPLAITYNLAAVDSLVLDAPTLAKIFNGTITRWDD PALALLNASMPAEDIRVVYRSDGSGTTDNFQAYLQSAAGGVWNKGAGKTFNGGVGTGAVGNTGTAAAVKSTEGAISYNEL SFALQQGLFAAEIKTPASRRSLRPVRIGTDIFGKTIKGARIVGTGNDLVLDLSSFYNPAQPDVYPIVLATYEIVCSKYPG FDVAKAVKAFLQAAIGPGQVELARTGYIPLSADFQAKVSGAVDAISSPQAPNPD
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=277, Percent_Identity=31.7689530685921, Blast_Score=109, Evalue=3e-25,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38447; Mature: 38447
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRSAVIAGVLMATTLVVSACGETPASLPYTAGAKVDCGGKQTLSASGSTAQANAMTRF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCCHHHHHHHHH IAAYRTACPGQTLDYTANGSGNGIGDFLAGRTDFAGSDTPLSGDQYAAAKRRCGGADAWN HHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC LPVVFGPLAITYNLAAVDSLVLDAPTLAKIFNGTITRWDDPALALLNASMPAEDIRVVYR CCEEEECCEEEEEHHHHHHHHHCCHHHHHHHCCCCEECCCCEEEEEECCCCCCCEEEEEE SDGSGTTDNFQAYLQSAAGGVWNKGAGKTFNGGVGTGAVGNTGTAAAVKSTEGAISYNEL CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEHHHH SFALQQGLFAAEIKTPASRRSLRPVRIGTDIFGKTIKGARIVGTGNDLVLDLSSFYNPAQ HHHHHCCCEEEECCCCHHHCCCCCEEECHHHHCCCCCCCEEEECCCCEEEEHHHHCCCCC PDVYPIVLATYEIVCSKYPGFDVAKAVKAFLQAAIGPGQVELARTGYIPLSADFQAKVSG CCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHHH AVDAISSPQAPNPD HHHHCCCCCCCCCC >Mature Secondary Structure MRTRSAVIAGVLMATTLVVSACGETPASLPYTAGAKVDCGGKQTLSASGSTAQANAMTRF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCCHHHHHHHHH IAAYRTACPGQTLDYTANGSGNGIGDFLAGRTDFAGSDTPLSGDQYAAAKRRCGGADAWN HHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC LPVVFGPLAITYNLAAVDSLVLDAPTLAKIFNGTITRWDDPALALLNASMPAEDIRVVYR CCEEEECCEEEEEHHHHHHHHHCCHHHHHHHCCCCEECCCCEEEEEECCCCCCCEEEEEE SDGSGTTDNFQAYLQSAAGGVWNKGAGKTFNGGVGTGAVGNTGTAAAVKSTEGAISYNEL CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEHHHH SFALQQGLFAAEIKTPASRRSLRPVRIGTDIFGKTIKGARIVGTGNDLVLDLSSFYNPAQ HHHHHCCCEEEECCCCHHHCCCCCEEECHHHHCCCCCCCEEEECCCCEEEEHHHHCCCCC PDVYPIVLATYEIVCSKYPGFDVAKAVKAFLQAAIGPGQVELARTGYIPLSADFQAKVSG CCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHHH AVDAISSPQAPNPD HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]