Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is suhB [H]
Identifier: 41410246
GI number: 41410246
Start: 4626329
End: 4627156
Strand: Reverse
Name: suhB [H]
Synonym: MAP4148c
Alternate gene names: 41410246
Gene position: 4627156-4626329 (Counterclockwise)
Preceding gene: 41410248
Following gene: 41410236
Centisome position: 95.8
GC content: 68.72
Gene sequence:
>828_bases ATGAAGTCAATGCAAGAGCTTTTTGAAATAGCTTGGCAGGCAACGCAAATCGGTGCCACCACGTTGAAGAAAACGCAGCC GAGCTCGGTGCAGCACAAGGGTGACCGCGACCTGGTATCCGATGTCGACCTGACCATCCAGCGTGACATCGCCAACTACC TGTCCCAGACCACGCCGGACGTCGCGCTGCTGGCCGAGGAGTCCGACCACCAACCCGACATCGAAACCGCCGAGTGGCTC TGGGTTCTCGACCCGGTGGACGGCACGTCGAATTTCGTGCACGGGCTGCCGCTGTGCGCGGTGTCGCTGGCCCTGCTGCA CGCCGGCCGCACCGTGGTGGCCGTCACCCACGCTCCCCTGCTGGGCAAGACCTACCACGCGATCGAGTCCAAGGGCGCGT TCGTCAACGGGGAACGGATCACCGCCAGCGCCACCGACAGCCTCAGCGGGGCGATCGTCTCGCTCGGCGACTACGCCGTC GGCCACGATGCGGGCCGGCTCAACGCGCACCGGCTGGCGCTCACCGCCGAGCTGGTGCCCCGGGCGGAGCGGATCCGGAT GATCGGCGCCGCGACGCTCGACCTGGCGTTCGTCGCCGAGGGTGCCCTGGACGCCTGCGTGATGATGTCCAACAAGCCGT GGGACACCGCCGCGGGGACGCTGATCGCCCGCGAAGCCGGAGCGCGGCTGACCGACGCGCAGGGCAACCCGCACACTCAC AAGTCCGCGTCGACCGTCGTCGCCGCGCCGGGCATCGCCGAGCAGCTGGCCACCGTGATCCGCAACACCGAGGTCCCCAG CGACCGGTACGCGGCCGCCGTCGGCTGA
Upstream 100 bases:
>100_bases CAGCACGACGCCGGGGTGCGCGAGACGCGAAATCGCCGAGCCCGTATGATCGAACAACGCCGAACGCACGCCACCACTGG AAGCGAGGCAAGCCTCTCCC
Downstream 100 bases:
>100_bases ACGCCCGCCGTCGGCTCAGCCGAGCATCTCGGCGATGGGCACGGCCGCGGCGATCTTGGCGCGGGTCTTCATGACCTTGC CCGGCATGCCGCCACCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKSMQELFEIAWQATQIGATTLKKTQPSSVQHKGDRDLVSDVDLTIQRDIANYLSQTTPDVALLAEESDHQPDIETAEWL WVLDPVDGTSNFVHGLPLCAVSLALLHAGRTVVAVTHAPLLGKTYHAIESKGAFVNGERITASATDSLSGAIVSLGDYAV GHDAGRLNAHRLALTAELVPRAERIRMIGAATLDLAFVAEGALDACVMMSNKPWDTAAGTLIAREAGARLTDAQGNPHTH KSASTVVAAPGIAEQLATVIRNTEVPSDRYAAAVG
Sequences:
>Translated_275_residues MKSMQELFEIAWQATQIGATTLKKTQPSSVQHKGDRDLVSDVDLTIQRDIANYLSQTTPDVALLAEESDHQPDIETAEWL WVLDPVDGTSNFVHGLPLCAVSLALLHAGRTVVAVTHAPLLGKTYHAIESKGAFVNGERITASATDSLSGAIVSLGDYAV GHDAGRLNAHRLALTAELVPRAERIRMIGAATLDLAFVAEGALDACVMMSNKPWDTAAGTLIAREAGARLTDAQGNPHTH KSASTVVAAPGIAEQLATVIRNTEVPSDRYAAAVG >Mature_275_residues MKSMQELFEIAWQATQIGATTLKKTQPSSVQHKGDRDLVSDVDLTIQRDIANYLSQTTPDVALLAEESDHQPDIETAEWL WVLDPVDGTSNFVHGLPLCAVSLALLHAGRTVVAVTHAPLLGKTYHAIESKGAFVNGERITASATDSLSGAIVSLGDYAV GHDAGRLNAHRLALTAELVPRAERIRMIGAATLDLAFVAEGALDACVMMSNKPWDTAAGTLIAREAGARLTDAQGNPHTH KSASTVVAAPGIAEQLATVIRNTEVPSDRYAAAVG
Specific function: Displays a 20-fold higher rate of hydrolysis of the D isoform of inositol 1-phosphate than of the L isoform [H]
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=246, Percent_Identity=31.7073170731707, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI221625487, Length=237, Percent_Identity=29.1139240506329, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI5031789, Length=237, Percent_Identity=29.1139240506329, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI221625507, Length=112, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1788882, Length=263, Percent_Identity=30.4182509505703, Blast_Score=127, Evalue=8e-31, Organism=Caenorhabditis elegans, GI193202570, Length=243, Percent_Identity=29.2181069958848, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI193202572, Length=245, Percent_Identity=28.1632653061224, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320493, Length=200, Percent_Identity=30.5, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321836, Length=210, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=7e-14, Organism=Drosophila melanogaster, GI21357329, Length=230, Percent_Identity=30, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24664922, Length=269, Percent_Identity=28.6245353159851, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24664926, Length=244, Percent_Identity=29.0983606557377, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI21357303, Length=237, Percent_Identity=32.4894514767932, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24664918, Length=205, Percent_Identity=32.6829268292683, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI21357957, Length=220, Percent_Identity=30.4545454545455, Blast_Score=98, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29088; Mature: 29088
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSMQELFEIAWQATQIGATTLKKTQPSSVQHKGDRDLVSDVDLTIQRDIANYLSQTTPD CCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCC VALLAEESDHQPDIETAEWLWVLDPVDGTSNFVHGLPLCAVSLALLHAGRTVVAVTHAPL EEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LGKTYHAIESKGAFVNGERITASATDSLSGAIVSLGDYAVGHDAGRLNAHRLALTAELVP HCHHHHHHHCCCCEECCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHEEEEHHHHC RAERIRMIGAATLDLAFVAEGALDACVMMSNKPWDTAAGTLIAREAGARLTDAQGNPHTH CHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCC KSASTVVAAPGIAEQLATVIRNTEVPSDRYAAAVG CCCCEEEECCCHHHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MKSMQELFEIAWQATQIGATTLKKTQPSSVQHKGDRDLVSDVDLTIQRDIANYLSQTTPD CCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCC VALLAEESDHQPDIETAEWLWVLDPVDGTSNFVHGLPLCAVSLALLHAGRTVVAVTHAPL EEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LGKTYHAIESKGAFVNGERITASATDSLSGAIVSLGDYAVGHDAGRLNAHRLALTAELVP HCHHHHHHHCCCCEECCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHEEEEHHHHC RAERIRMIGAATLDLAFVAEGALDACVMMSNKPWDTAAGTLIAREAGARLTDAQGNPHTH CHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCC KSASTVVAAPGIAEQLATVIRNTEVPSDRYAAAVG CCCCEEEECCCHHHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9720201; 10360571; 10508089 [H]