Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410236
Identifier: 41410236
GI number: 41410236
Start: 4616342
End: 4616719
Strand: Reverse
Name: 41410236
Synonym: MAP4138c
Alternate gene names: NA
Gene position: 4616719-4616342 (Counterclockwise)
Preceding gene: 41410246
Following gene: 41410235
Centisome position: 95.59
GC content: 65.61
Gene sequence:
>378_bases GTGAAGTGGACGACCGTCGCCGGGTCACTGGCCGCCTGCGCGCTTGCCGTCCTCGCCGGGGCGGTTGCCCCGCCGCGGGT CGCGCAGGCCAAGAACGGCGACACCCACATCATCGGGCAGGACACCGAGCAGACCATCGACTGCAACGACGCCACCCTGC TGGTCAACGGCACCGGCAACGTCGTCACCGCGCTGGGCAACTGCTATGCCGTGACGGTGATGGGTTCGTCGAACACCGTT ATCGCCGACTCCGTTTCGCACGACATCACCGTGTACGGCTATGACCAGACGGTGTTCTACAAGAGCGGTCAGCCGTTCCT GTGGGACCGCGGCCGCGAATTGGGCATGACCAACCGGCTCCAACAGGTGCCTGGTTAA
Upstream 100 bases:
>100_bases CGAAGGAAAAGAAACTCTGCCCTCCGGCGGGCATCTGCACGTAATGTCATGCTTGCCTCGTTCGAGCATCTTCGAGCCGC GTGACAAAAGGGGGCCCGCC
Downstream 100 bases:
>100_bases AGCACAGCAGCACAACATAATTCGAATCAAGGGGGAACGAGGAACCATGCCCGCCCGTACGCCCACACCTGTCCGTGACC GCTGGCTGCGCCTGACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MKWTTVAGSLAACALAVLAGAVAPPRVAQAKNGDTHIIGQDTEQTIDCNDATLLVNGTGNVVTALGNCYAVTVMGSSNTV IADSVSHDITVYGYDQTVFYKSGQPFLWDRGRELGMTNRLQQVPG
Sequences:
>Translated_125_residues MKWTTVAGSLAACALAVLAGAVAPPRVAQAKNGDTHIIGQDTEQTIDCNDATLLVNGTGNVVTALGNCYAVTVMGSSNTV IADSVSHDITVYGYDQTVFYKSGQPFLWDRGRELGMTNRLQQVPG >Mature_125_residues MKWTTVAGSLAACALAVLAGAVAPPRVAQAKNGDTHIIGQDTEQTIDCNDATLLVNGTGNVVTALGNCYAVTVMGSSNTV IADSVSHDITVYGYDQTVFYKSGQPFLWDRGRELGMTNRLQQVPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13133; Mature: 13133
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWTTVAGSLAACALAVLAGAVAPPRVAQAKNGDTHIIGQDTEQTIDCNDATLLVNGTGN CCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEECCCC VVTALGNCYAVTVMGSSNTVIADSVSHDITVYGYDQTVFYKSGQPFLWDRGRELGMTNRL EEEECCCEEEEEEECCCCEEEEECCCCCEEEEECCEEEEEECCCCEEECCCCCCCCCHHH QQVPG HCCCC >Mature Secondary Structure MKWTTVAGSLAACALAVLAGAVAPPRVAQAKNGDTHIIGQDTEQTIDCNDATLLVNGTGN CCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEECCCC VVTALGNCYAVTVMGSSNTVIADSVSHDITVYGYDQTVFYKSGQPFLWDRGRELGMTNRL EEEECCCEEEEEEECCCCEEEEECCCCCEEEEECCEEEEEECCCCEEECCCCCCCCCHHH QQVPG HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA