Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410235
Identifier: 41410235
GI number: 41410235
Start: 4615810
End: 4616295
Strand: Reverse
Name: 41410235
Synonym: MAP4137c
Alternate gene names: NA
Gene position: 4616295-4615810 (Counterclockwise)
Preceding gene: 41410236
Following gene: 41410225
Centisome position: 95.58
GC content: 67.08
Gene sequence:
>486_bases ATGCCCGCCCGTACGCCCACACCTGTCCGTGACCGCTGGCTGCGCCTGACCGTGGCACCGGCCGCGGCGCTGCTGTTGGC CGGCTGCAGTTCGACGGCCAACCCGCCGGCGGGCTCGTCGACGACCACCACCAAGAGCACCGCCACGACGAGTGCCGGCG CGGCGCCGACGACGGGATCGGGCGGGGCGAGCACCACCGCGTCCATCGAGATCGGTAACACGATCAATTACGGGTCGATG GGCACCACCACCACCCTGGACTGCGCCGGCGGCAAGTCGCTGAACGTGGGCGGCTCGGACAACACCCTGACCGTCACCGG CACCTGCGAGTCGGCGACCGTCAGCGGCACCAACAACAAGATCACCTTCGACAAGGTCAACACCCGCATCACCGTGCTGG GGATGAACAACACGATCACCTACAAGGACGGTGACCCCAAGGTCGACAAGATCGGCCAGAGCAACACCATCAACAAGGGC GGCTGA
Upstream 100 bases:
>100_bases GACCGCGGCCGCGAATTGGGCATGACCAACCGGCTCCAACAGGTGCCTGGTTAAAGCACAGCAGCACAACATAATTCGAA TCAAGGGGGAACGAGGAACC
Downstream 100 bases:
>100_bases CCCTCAAACCGCGGAGGCGCCGTGCCGTCCCGCGCCCGCGGCGAACCGGCCGGCGCCCTCGTTGGCCTCGGCGGCCACCC GGGAGATGCTGGCGAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine Rich Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGSGGASTTASIEIGNTINYGSM GTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKG G
Sequences:
>Translated_161_residues MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGSGGASTTASIEIGNTINYGSM GTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKG G >Mature_160_residues PARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGSGGASTTASIEIGNTINYGSMG TTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16062; Mature: 15931
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGS CCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGASTTASIEIGNTINYGSMGTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNK CCCCEEEEEEECCEECCCCCCCCEEEECCCCCEEECCCCCCEEEEEECCCCEEEECCCCE ITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKGG EEEEECCEEEEEEECCCEEEECCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure PARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGS CCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGASTTASIEIGNTINYGSMGTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNK CCCCEEEEEEECCEECCCCCCCCEEEECCCCCEEECCCCCCEEEEEECCCCEEEECCCCE ITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKGG EEEEECCEEEEEEECCCEEEECCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA