Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410235

Identifier: 41410235

GI number: 41410235

Start: 4615810

End: 4616295

Strand: Reverse

Name: 41410235

Synonym: MAP4137c

Alternate gene names: NA

Gene position: 4616295-4615810 (Counterclockwise)

Preceding gene: 41410236

Following gene: 41410225

Centisome position: 95.58

GC content: 67.08

Gene sequence:

>486_bases
ATGCCCGCCCGTACGCCCACACCTGTCCGTGACCGCTGGCTGCGCCTGACCGTGGCACCGGCCGCGGCGCTGCTGTTGGC
CGGCTGCAGTTCGACGGCCAACCCGCCGGCGGGCTCGTCGACGACCACCACCAAGAGCACCGCCACGACGAGTGCCGGCG
CGGCGCCGACGACGGGATCGGGCGGGGCGAGCACCACCGCGTCCATCGAGATCGGTAACACGATCAATTACGGGTCGATG
GGCACCACCACCACCCTGGACTGCGCCGGCGGCAAGTCGCTGAACGTGGGCGGCTCGGACAACACCCTGACCGTCACCGG
CACCTGCGAGTCGGCGACCGTCAGCGGCACCAACAACAAGATCACCTTCGACAAGGTCAACACCCGCATCACCGTGCTGG
GGATGAACAACACGATCACCTACAAGGACGGTGACCCCAAGGTCGACAAGATCGGCCAGAGCAACACCATCAACAAGGGC
GGCTGA

Upstream 100 bases:

>100_bases
GACCGCGGCCGCGAATTGGGCATGACCAACCGGCTCCAACAGGTGCCTGGTTAAAGCACAGCAGCACAACATAATTCGAA
TCAAGGGGGAACGAGGAACC

Downstream 100 bases:

>100_bases
CCCTCAAACCGCGGAGGCGCCGTGCCGTCCCGCGCCCGCGGCGAACCGGCCGGCGCCCTCGTTGGCCTCGGCGGCCACCC
GGGAGATGCTGGCGAATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Threonine Rich Protein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGSGGASTTASIEIGNTINYGSM
GTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKG
G

Sequences:

>Translated_161_residues
MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGSGGASTTASIEIGNTINYGSM
GTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKG
G
>Mature_160_residues
PARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGSGGASTTASIEIGNTINYGSMG
TTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16062; Mature: 15931

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGS
CCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGASTTASIEIGNTINYGSMGTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNK
CCCCEEEEEEECCEECCCCCCCCEEEECCCCCEEECCCCCCEEEEEECCCCEEEECCCCE
ITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKGG
EEEEECCEEEEEEECCCEEEECCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
PARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATTSAGAAPTTGS
CCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGASTTASIEIGNTINYGSMGTTTTLDCAGGKSLNVGGSDNTLTVTGTCESATVSGTNNK
CCCCEEEEEEECCEECCCCCCCCEEEECCCCCEEECCCCCCEEEEEECCCCEEEECCCCE
ITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQSNTINKGG
EEEEECCEEEEEEECCCEEEECCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA