Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410174
Identifier: 41410174
GI number: 41410174
Start: 4542237
End: 4544873
Strand: Direct
Name: 41410174
Synonym: MAP4076
Alternate gene names: NA
Gene position: 4542237-4544873 (Clockwise)
Preceding gene: 41410172
Following gene: 41410176
Centisome position: 94.05
GC content: 70.88
Gene sequence:
>2637_bases ATGCGGTCGCGAATGGCCCCGATTGCGCTGGTCGCGACCCTGGCCGTGGTGATGACGGTGATCGCGCCAGCGCCGCCCCG GGGCTACGACGGACCGCCGCTGTTCGTGGCCAATCCCGTCGACCACGTCGTGACGCTCATCGGCACCGGCACCGGCGGCG AGACGGTGGGGGAGATCAACAACTTCCCCGGCGCCACCGTCCCGTTCGGGATGGTGCAGTACTCGCCGGACACCGCCGGC AACTACGCCGGCTACAACTACGACAACCCGCGGGCGACCGGGTTCAGCATGACGCACGCCTCGGTGGGATGCGCTGCGTT CGGCGACATCTCGATGCTGCCGGTCACCGGCGGGCTCGGCGTGCAGCCCTGGAACGCCACCGAACGCATCGCCCACGACG ACACCGAGCGCGGGGTGCCCGGCTATTACACGGTGCGACTCCCCGGCGCCGGGGTGACCGCCGAACTCACCGCCACCGCG CACACCGGCGTCGGACGGTTCAGCTACCCGGGCGACGGCCGGCCCGCCCTGCTGCAGGTGCGTTCCGGCTCGTCGCTGGC CGGCAACTCCCGCGCCACCATCCAGCTCGGCGAGGACAACACCACCATCACCGGCTGGGCCACCAGCGGCGGCTTCTGCG ACAAGCCCAACGCCTACACCGTGTACTTCGCGATGAAGTTCAGCCGGCCGTTCATCTCGTACGGGTCCTGGGACGGCAGC ACCGTCTACCCCGGGGCCCGCAGCGCGAACGCGCCGTACAGCGGCGGGTACGTCGAGTTCCCGGCCGGCTCGGTGCTCGA GGCGCGCACCGCGATCTCCTACGTCGGCATCGAGGGGGCCCGGGCCAACCTGGCGGCCGAGGGCAACGCCGGTTTCGACG ACGTCCGCGCCGCCGCGGCCCGGCAATGGAACGCCGCGCTGTCCCGGGTGACGGTGGCCGGCCGCAACACCGACGACCTG ACCACCTTCTACACCGCCCTGTACCGAACCATGTTGCACCCCAACATGTTCAACGACGCCGACGGGCGCTACGTCGGGTT CGACGGCGGCATCCACCGGGTGGCCGACGGTCACGTCCAGTACGCCAACTTCTCCGACTGGGACACCTACCGCTGCCTGG CGGCGTTGCAGGCGTTGCTGTTCCCGGACCGGGCCGCCGACATGGCCCAATCGCTGGTCACCGACGCCCAGCAGAGCGGC GCGCTGCCGCGCTGGGCGTTCGCCAACGCCGCCACCGGCGAGATGAGCGGCGACAGCGTGGTCCCGCTCATCGTTAACCT GAACACGTTCGGCGCCAACGACTTCGACACCGCCGCGGCGCTGCGCTACATGGTGGACGGGGCGACCAAGGGCGGGGTGG GCCTGGCCGGTTACGTGGAACGCCGCGGCATCGCCACCTACCTGCGGCTGGGCTACGCGCCGTTCACCCTGGAATTCGGC CGCAACGGCTGGATCGCGGACGCGTCGATCACCCTCGAATGGTCGATCGACGACTTCGCCATCTCCCGGTTCGCCGACTC GCTCGGCGACGCCGCCACCGCCGCCGAATTCGCGAACCGGGCGCAGTACTGGCAGAACCTGTTCAATGCCAGCACCCGAT CGGTGGTGCCGCGCAGCTGGAGCGGATTCTTCCGCCCCGGGCCCGCGGTCGTGGTGTCCCCGGACAACTTCGGCCAGGTC GGGTACGACGAGGGCAACGCCGAGCAGTACGTGTGGTCGGTGCCGCACAACGTCGCGGGCCTGGTGACCGCGCTGGGCGG GCGCGCCGCGGTGGCCGAGCGGCTCGACCGGTTCACCAAGAAACTCAACGTCGGTCCCAACCAGCCGTACCTGTGGGCCG GCAACGAGCCCAGTTTCGGTGTGCCGTGGCTGTACAACTACATCGGCCAACCGTGGAAGACCCAACACACCGTCGACCGG GTGCGCGGGCTGTTCGGTCCGACCGCCGACGGCGAACCGGGCAACGACGACCTGGGCGCGCTGGCCGGCTGGTACGTGTG GGCGGCGCTGGGACTGTACCCGGCCACCCCGGGAACCCCCATCCTGACGGTGGCCGCGCCGCTGTTCGACCGCATCGAAA TCGCGCTGCCGGCAGGCAAATCCATCCGGATCGCCGCCCCCGGCGCGTCCGGGCCGCACCACCCGGCCTACATCAGCGGC CTGAAGGTCGACGGCCGGCCCACCGAGCACACCTGGCTGCCCGAGTCGATCATCCGCACCGGCGGCACGCTGGCGTTCTC GCTCGCGGCCTACCCCGACAAGCATTGGGGCACGGCCGAATCTGACGCGCCGCCGTCGTTCGGGGCGGGGAGTTCGGCGG TGGCGGTCAACGTGCCGCAACCCGTCGTCAGCATCGCGCCCGGGCACCGCGGCAGCGTGACCCTGGACGCGCAACGCATG ATCGACGGCGCCGGTGCATACACCGTCTCCGGCGCCGCCTCCGACCCCGGCGTCGCCGTGACGCCCACGTCCGGCCAATT CGACGCCGGCGGGGCGGCGTCGGTGTCCGTCCCGATCACCGTGGCACCGACGGTGCCCCAGGACTACTACCTGGTGTCCT TGACCACCACCGTCGGCCAAAGCACCCGCACCACAACGGTTCTGGTGGACACCCAGGCCGAACCGGAGAGCCGTTGA
Upstream 100 bases:
>100_bases GCCCGGCCGCGCGGGCCGGCCGGCGATCGTTATCCAATTAGTGGCCGAAAACGCCACGGCAATACACCGCCAACCACCGG CGATCCAGTATTAGACAGGT
Downstream 100 bases:
>100_bases CCCTCAGACCATCTCGTGCTTGGTCAGCCAGCGCATCACCGGCCAGCCGACGAACACCGGCAGCCAGCAGGTCAGCATCC GATACAGCAGCACGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MRSRMAPIALVATLAVVMTVIAPAPPRGYDGPPLFVANPVDHVVTLIGTGTGGETVGEINNFPGATVPFGMVQYSPDTAG NYAGYNYDNPRATGFSMTHASVGCAAFGDISMLPVTGGLGVQPWNATERIAHDDTERGVPGYYTVRLPGAGVTAELTATA HTGVGRFSYPGDGRPALLQVRSGSSLAGNSRATIQLGEDNTTITGWATSGGFCDKPNAYTVYFAMKFSRPFISYGSWDGS TVYPGARSANAPYSGGYVEFPAGSVLEARTAISYVGIEGARANLAAEGNAGFDDVRAAAARQWNAALSRVTVAGRNTDDL TTFYTALYRTMLHPNMFNDADGRYVGFDGGIHRVADGHVQYANFSDWDTYRCLAALQALLFPDRAADMAQSLVTDAQQSG ALPRWAFANAATGEMSGDSVVPLIVNLNTFGANDFDTAAALRYMVDGATKGGVGLAGYVERRGIATYLRLGYAPFTLEFG RNGWIADASITLEWSIDDFAISRFADSLGDAATAAEFANRAQYWQNLFNASTRSVVPRSWSGFFRPGPAVVVSPDNFGQV GYDEGNAEQYVWSVPHNVAGLVTALGGRAAVAERLDRFTKKLNVGPNQPYLWAGNEPSFGVPWLYNYIGQPWKTQHTVDR VRGLFGPTADGEPGNDDLGALAGWYVWAALGLYPATPGTPILTVAAPLFDRIEIALPAGKSIRIAAPGASGPHHPAYISG LKVDGRPTEHTWLPESIIRTGGTLAFSLAAYPDKHWGTAESDAPPSFGAGSSAVAVNVPQPVVSIAPGHRGSVTLDAQRM IDGAGAYTVSGAASDPGVAVTPTSGQFDAGGAASVSVPITVAPTVPQDYYLVSLTTTVGQSTRTTTVLVDTQAEPESR
Sequences:
>Translated_878_residues MRSRMAPIALVATLAVVMTVIAPAPPRGYDGPPLFVANPVDHVVTLIGTGTGGETVGEINNFPGATVPFGMVQYSPDTAG NYAGYNYDNPRATGFSMTHASVGCAAFGDISMLPVTGGLGVQPWNATERIAHDDTERGVPGYYTVRLPGAGVTAELTATA HTGVGRFSYPGDGRPALLQVRSGSSLAGNSRATIQLGEDNTTITGWATSGGFCDKPNAYTVYFAMKFSRPFISYGSWDGS TVYPGARSANAPYSGGYVEFPAGSVLEARTAISYVGIEGARANLAAEGNAGFDDVRAAAARQWNAALSRVTVAGRNTDDL TTFYTALYRTMLHPNMFNDADGRYVGFDGGIHRVADGHVQYANFSDWDTYRCLAALQALLFPDRAADMAQSLVTDAQQSG ALPRWAFANAATGEMSGDSVVPLIVNLNTFGANDFDTAAALRYMVDGATKGGVGLAGYVERRGIATYLRLGYAPFTLEFG RNGWIADASITLEWSIDDFAISRFADSLGDAATAAEFANRAQYWQNLFNASTRSVVPRSWSGFFRPGPAVVVSPDNFGQV GYDEGNAEQYVWSVPHNVAGLVTALGGRAAVAERLDRFTKKLNVGPNQPYLWAGNEPSFGVPWLYNYIGQPWKTQHTVDR VRGLFGPTADGEPGNDDLGALAGWYVWAALGLYPATPGTPILTVAAPLFDRIEIALPAGKSIRIAAPGASGPHHPAYISG LKVDGRPTEHTWLPESIIRTGGTLAFSLAAYPDKHWGTAESDAPPSFGAGSSAVAVNVPQPVVSIAPGHRGSVTLDAQRM IDGAGAYTVSGAASDPGVAVTPTSGQFDAGGAASVSVPITVAPTVPQDYYLVSLTTTVGQSTRTTTVLVDTQAEPESR >Mature_878_residues MRSRMAPIALVATLAVVMTVIAPAPPRGYDGPPLFVANPVDHVVTLIGTGTGGETVGEINNFPGATVPFGMVQYSPDTAG NYAGYNYDNPRATGFSMTHASVGCAAFGDISMLPVTGGLGVQPWNATERIAHDDTERGVPGYYTVRLPGAGVTAELTATA HTGVGRFSYPGDGRPALLQVRSGSSLAGNSRATIQLGEDNTTITGWATSGGFCDKPNAYTVYFAMKFSRPFISYGSWDGS TVYPGARSANAPYSGGYVEFPAGSVLEARTAISYVGIEGARANLAAEGNAGFDDVRAAAARQWNAALSRVTVAGRNTDDL TTFYTALYRTMLHPNMFNDADGRYVGFDGGIHRVADGHVQYANFSDWDTYRCLAALQALLFPDRAADMAQSLVTDAQQSG ALPRWAFANAATGEMSGDSVVPLIVNLNTFGANDFDTAAALRYMVDGATKGGVGLAGYVERRGIATYLRLGYAPFTLEFG RNGWIADASITLEWSIDDFAISRFADSLGDAATAAEFANRAQYWQNLFNASTRSVVPRSWSGFFRPGPAVVVSPDNFGQV GYDEGNAEQYVWSVPHNVAGLVTALGGRAAVAERLDRFTKKLNVGPNQPYLWAGNEPSFGVPWLYNYIGQPWKTQHTVDR VRGLFGPTADGEPGNDDLGALAGWYVWAALGLYPATPGTPILTVAAPLFDRIEIALPAGKSIRIAAPGASGPHHPAYISG LKVDGRPTEHTWLPESIIRTGGTLAFSLAAYPDKHWGTAESDAPPSFGAGSSAVAVNVPQPVVSIAPGHRGSVTLDAQRM IDGAGAYTVSGAASDPGVAVTPTSGQFDAGGAASVSVPITVAPTVPQDYYLVSLTTTVGQSTRTTTVLVDTQAEPESR
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92367; Mature: 92367
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00699 NITROGENASE_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRMAPIALVATLAVVMTVIAPAPPRGYDGPPLFVANPVDHVVTLIGTGTGGETVGEIN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHEEEEEECCCCCCCHHHCC NFPGATVPFGMVQYSPDTAGNYAGYNYDNPRATGFSMTHASVGCAAFGDISMLPVTGGLG CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEEECCCCC VQPWNATERIAHDDTERGVPGYYTVRLPGAGVTAELTATAHTGVGRFSYPGDGRPALLQV CCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEE RSGSSLAGNSRATIQLGEDNTTITGWATSGGFCDKPNAYTVYFAMKFSRPFISYGSWDGS ECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCC TVYPGARSANAPYSGGYVEFPAGSVLEARTAISYVGIEGARANLAAEGNAGFDDVRAAAA EECCCCCCCCCCCCCCEEECCCCCHHHHHHHEEEEECCCCCCEEEECCCCCHHHHHHHHH RQWNAALSRVTVAGRNTDDLTTFYTALYRTMLHPNMFNDADGRYVGFDGGIHRVADGHVQ HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCEEE YANFSDWDTYRCLAALQALLFPDRAADMAQSLVTDAQQSGALPRWAFANAATGEMSGDSV ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCE VPLIVNLNTFGANDFDTAAALRYMVDGATKGGVGLAGYVERRGIATYLRLGYAPFTLEFG EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHHHHHCCCEEEEEEC RNGWIADASITLEWSIDDFAISRFADSLGDAATAAEFANRAQYWQNLFNASTRSVVPRSW CCCEEEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC SGFFRPGPAVVVSPDNFGQVGYDEGNAEQYVWSVPHNVAGLVTALGGRAAVAERLDRFTK CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH KLNVGPNQPYLWAGNEPSFGVPWLYNYIGQPWKTQHTVDRVRGLFGPTADGEPGNDDLGA HHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH LAGWYVWAALGLYPATPGTPILTVAAPLFDRIEIALPAGKSIRIAAPGASGPHHPAYISG HHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCEEEE LKVDGRPTEHTWLPESIIRTGGTLAFSLAAYPDKHWGTAESDAPPSFGAGSSAVAVNVPQ EEECCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PVVSIAPGHRGSVTLDAQRMIDGAGAYTVSGAASDPGVAVTPTSGQFDAGGAASVSVPIT CEEEECCCCCCCEEEEHHHHHCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEEE VAPTVPQDYYLVSLTTTVGQSTRTTTVLVDTQAEPESR EECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MRSRMAPIALVATLAVVMTVIAPAPPRGYDGPPLFVANPVDHVVTLIGTGTGGETVGEIN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHEEEEEECCCCCCCHHHCC NFPGATVPFGMVQYSPDTAGNYAGYNYDNPRATGFSMTHASVGCAAFGDISMLPVTGGLG CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEEECCCCC VQPWNATERIAHDDTERGVPGYYTVRLPGAGVTAELTATAHTGVGRFSYPGDGRPALLQV CCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEE RSGSSLAGNSRATIQLGEDNTTITGWATSGGFCDKPNAYTVYFAMKFSRPFISYGSWDGS ECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCC TVYPGARSANAPYSGGYVEFPAGSVLEARTAISYVGIEGARANLAAEGNAGFDDVRAAAA EECCCCCCCCCCCCCCEEECCCCCHHHHHHHEEEEECCCCCCEEEECCCCCHHHHHHHHH RQWNAALSRVTVAGRNTDDLTTFYTALYRTMLHPNMFNDADGRYVGFDGGIHRVADGHVQ HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCEEE YANFSDWDTYRCLAALQALLFPDRAADMAQSLVTDAQQSGALPRWAFANAATGEMSGDSV ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCE VPLIVNLNTFGANDFDTAAALRYMVDGATKGGVGLAGYVERRGIATYLRLGYAPFTLEFG EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHHHHHCCCEEEEEEC RNGWIADASITLEWSIDDFAISRFADSLGDAATAAEFANRAQYWQNLFNASTRSVVPRSW CCCEEEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC SGFFRPGPAVVVSPDNFGQVGYDEGNAEQYVWSVPHNVAGLVTALGGRAAVAERLDRFTK CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH KLNVGPNQPYLWAGNEPSFGVPWLYNYIGQPWKTQHTVDRVRGLFGPTADGEPGNDDLGA HHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH LAGWYVWAALGLYPATPGTPILTVAAPLFDRIEIALPAGKSIRIAAPGASGPHHPAYISG HHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCEEEE LKVDGRPTEHTWLPESIIRTGGTLAFSLAAYPDKHWGTAESDAPPSFGAGSSAVAVNVPQ EEECCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PVVSIAPGHRGSVTLDAQRMIDGAGAYTVSGAASDPGVAVTPTSGQFDAGGAASVSVPIT CEEEECCCCCCCEEEEHHHHHCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEEE VAPTVPQDYYLVSLTTTVGQSTRTTTVLVDTQAEPESR EECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA